Bioinf ormatic analysis of diverse protein superf amilies to design improved enzymes Dmitry Suplatov , Nikolay Panin, Tatyana Shcherbakova, Ilyas Khaliullin, Vytas Svedas Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and F aculty of Bioengineering and Bioinformatics ... D. Suplatov, E. Kirilin, V. Takhaveev, V. Svedas (2014) Zebra: web-server for bioinformatic analysis of diverse protein families, J.Biomol.Struct.Dyn., ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/69.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/68.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/59.pdf

... Aptamer DNA : A New Type of Thrombin Inhibitors V. A. Spiridonova*,1 E. V. Rog**, T. N. Dugina***, S. M. Strukova***, and A. M. Kopylov** *Belozersky Institute of Physicochemical ... State University, Vorob'evy gory, Moscow, 119899 Russia Received November 13, 2002; in final form, November 21, 2002 Abstract--The formation of complexes between various thrombin preparations and 30-mer aptamer DNA was comparatively studied, and a correlation between the ... 5 2003 Vol. ... Vol. ...

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• http://rnp-group.genebee.msu.su/pdfs/article_vas_bioelectro.pdf
• http://rnp-group.genebee.msu.su/pdfs/febsz.pdf

... The supermolecular ordering of dimethylsulfoxide - trichloromethane mixtures has been studied in a wide temperature and a whole concentration intervals. Thermodynamic mixing functions (Gibbs energy, enthalpy, entropy, activity coefficients), permittivity, and Rayleigh ratios for isotropic and anisotropic light scattering are considered. A molecular model including the formation of the 1:1 and 1:2 molecular complexes as well as self-association of the dimethylsulfoxide was substantiated. ...

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• Supramolecular structure and physicochemical properties of the systems
• Moscow University Chemistry Bulletin Vol. 43, No. 6, P. 370 (2002)
• Molecular Structure and Physicochemical Properties of Acetone-Chloroform...

... Head of Biochemistry department, Corresponding Member of Russian Academy of Sciences, Doctor of Science . ... The first line of investigation, started in mid-1980s, deals with analysis of the structure and properties of proteins involved in regulation of contractile activity of different muscle (troponins I and T, caldesmon, calponin). ... The third direction of investigation deals with the investigation of the structure and properties of human small heat shock proteins. ... Biochemistry. ...

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• Heterooligomeric complexes formed by human small heat shock proteins HspB1
• Structure, properties, and probable physiological role of small heat shock
• Structural basis for regulation of stability and activity in

Электронная библиотека Попечительского совета . ... Lipowsky R., Sackmann E. - Structure and Dynamics of Membranes: Generic and Specific Interactions . ... Название: Structure and Dynamics of Membranes: Generic and Specific Interactions . Авторы: Lipowsky R., Sackmann E. Аннотация: . ... The first two chapters of this part discuss the generic interactions of membranes from the conceptual point of view. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Reichardt J. - Structure in Complex Networks :: Электронная библиотека
• Harkins W.D., Wilson E.D. - The Structure of Complex Atoms and the Changes of
• Lipowsky R., Sackmann E. - Handbook of Biological Physics. Volume 1B. Structure

... Terenin IM, Dmitriev SE, Andreev DE, Shatsky IN. 2008) Eukaryotic translation initiation machinery can operate in a bacterial-like mode without eIF2. Nat Struct Mol Biol . ... PubMed ][ PDF ] . ... 2007) Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated. ... 2001) Molecular mechanisms of translation initiation in eukaryotes. ...

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• vartapetian_dept
• Laboratory of protein-nucleic interactions (Russian version)

... Moscow State Uiversity . ... Different wave function models and perturbations theory approximations are discussed, including the second Born one. ... Keldysh Institute of Applied Mathematics of RAS . DRIVER: Numerical investigation of aerodynamic and aeroacoustic charateristics of bluff aircraft elements and complex turbulent flows, design of better noise prediction tools for development of quieter aircrafts . ... Research Computing Center (RCC) of Lomonosov Moscow State University . ...

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• APPLICATIONS: Aerophysics | Moscow University Supercomputing Center
• APPLICATIONS: Physicochemical Biology | Moscow University Supercomputing Center
• APPLICATIONS: High Molecular Weight Compounds | Moscow University

... 2015 January 21 . The Complex Ion Tail of Comet Lovejoy . ... As the name implies, the ion tail is made of ionized gas -- gas energized by ultraviolet light from the Sun and pushed outward by the solar wind . ... The effect of the variable solar wind combined with different gas jets venting from the comet's nucleus accounts for the tail's complex structure. Following the wind, structure in Comet Lovejoy's tail can be seen to move outward from the Sun even alter its wavy appearance over time. ...

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• APOD: 2011 October 24 - HH 222: The Waterfall Nebula
• APOD: 2008 March 27 - The N44 Complex
• APOD: 2012 December 19 - NGC 5189: An Unusually Complex Planetary Nebula

... DNA chains . RNA chains . Protein chains . ... TRANSFERASE/DNA . ... dna . ... ANTIBIOTIC/DNA . ... TRANSCRIPTION/DNA . ... 1997-12-10 . ... VIRAL PROTEIN/RNA . ... rna . ... ISOMERASE/DNA . ... VIRUS/RNA . ... TRANSCRIPTION/RNA . ... VIRAL PROTEIN/DNA . ... HYDROLASE/DNA . ... RNA BINDING PROTEIN/RNA . ... DNA BINDING PROTEIN/DNA . ... TRANSFERASE/RNA . ... GENE REGULATION/DNA . ... GENE REGULATION/RNA . ... HYDROLASE/RNA . ... PROTEIN/DNA . ...

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• About authors ot this complex
• HTH_3_main
• S publications

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPsite
• SDPsite - PF01206
• SDPsite - PF01205

Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Jansen S. , Collins A. , Golden L. , Sokolova O. , Goode B.L. в журнале Journal of Biological Chemistry , издательство American Society for Biochemistry and Molecular Biology Inc. ... Maiti S., Michelot A., Gould C., Blanchoin L. , Sokolova O. , Goode B.L. в журнале Cytoskeleton , издательство John Wiley & Sons Inc. ...

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• Smirnov Eugeny G. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• Kozlovsky S.V. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• Birdsall Berry - сотрудник | ИСТИНА - Интеллектуальная Система Тематического

... Laboratory has collection of the bird acoustic signals tape-recordings (more than of 150 species). ... The laboratory collection of hamsters includes 16 species (out of 19 distributed in the Palearctic). ... Thus, we have got an opportunity to conduct comparative analysis of behavior, chemical communication both in phylogenetically close and distant species. ... A comparative study of both optical and acoustic communicative signals in all six swan species of the world fauna has been accomplished. ...

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• Laboratories: Group for Bioinformatics and Modeling Biological Process: Results
• Laboratories: Laboratory of population ecology: Goals and Tasks
• Laboratories: Laboratory for Synecology: Goals and Tasks

. A program for alignment of structures of DNA-protein complexes . Home . Feedback . Help . About . Input PDB code of the first complex: and chain of the protein (optional): . Input PDB code of the second complex: and chain of the protein (optional): . If you get stuck with program input, try example data and click Align! Example data . 2016

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• ConClus
• StructAlign help

... Simulation of a molecular structure formation as a result of thermal disruption in amorphous carbon" . ... The IBM BlueGene/P supercomputer installed at the Faculty of Computational Mathematics and Cybernetics of the Lomonosov Moscow State University was used. Keywords: multiscale quantum molecular dynamics codes, phase transition in amorphous carbon, phase change memory, nanotechnology, supercomputer IBM BlueGene/P. PDF (Full text in Russian, References in English) (1.58MB) . ...

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• "Shock waves in real gases with different specific heat ratios ahead of and
• "A language for a tool set oriented to interactive processing of complex data

... Proterozoic alkaline massifs of nepheline syenite series are predominantly concentrated in margin zones of Ukrainian Crystalline Shield. ... Most of alkaline massifs of this type such as Octyabrskiy , Malaya Tersa , Sherbakovka (next to border of Rostov district in Russia) alkaline massifs and Chernigovka carbonatite one are located at Azov block (domain) in USh . ... The 2 nd range tectonic zones are structures with deep faults, which divide blocks of 1 st and upper tectonic range. ...

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• http://geo.web.ru/conf/alkaline/2009/Bagdasarov.htm
• http://geo.web.ru/conf/alkaline/2009/Olysych.htm
• Новое учебное пособие по тектонофизике: ВВЕДЕНИЕ В ТЕКТОНОФИЗИКУ, Авторы: М. А.

Victor A. Safonov . ... Department of Electrochemistry . ... M.V.Lomonosov Moscow State University . ... Junior Scientific Researcher, Associate Professor, Leading Scientific Researcher, Principal Scientific Researcher Department of Electrochemistry, Faculty of Chemistry, M.V. Lomonosov Moscow State University . ... Specific features of the double electrical layer structure at the interface of alloy electrodes with electrolyte solutions (kinetics and mechanism of surface segregation processes) . ...

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• Laboratory of Electrical Double Layer and Electrode Kinetics
• Maria A. Choba:CV
• Elena V. Stenina:CV

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... The most simple approach is comparing the number of change-points per time unit in EEG obtained from different subjects, or from the same subject in different states, or from the same subject's different brain sites (in different electrode locations). ... Multi-channel EEG: change-points in alpha activity . ... Rate of alpha power change-point occurence in different EEG channels . ...

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• Change-points in EEG components with different pattern
• Conclusion
• Unsolved problems and new prospects

... Applications of Molecular Mechanics to Metal Complexes" . ... Molecular mechanics study of the mixed-ligand lanthanide complexes using Gillespie-Kepert model . ... Within MM-GK, the same parameters are applicable to complexes of different coordination numbers/polyhedra. ... Gillespie-Kepert model . ... Using derived computational parameters, we calculated the geometry of 39 lanthanide ion nonaaqua complexes, 6 octaaqua complexes and 18 beta- diketonate and aqua-beta-diketonate complexes. ...

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Diploma thesis «Infrared and terahertz pulsed spectroscopy of structural changes of proteins and model systems under the interaction with crown-ether» Spectroscopy of the biological molecules is a very important task of the modern science. Protein molecules are among interesting biological complexes. ... One of the possible mechanisms of this effect is formation of complexes of crown-ether with surface amino groups of protein. ... Supervisors: Doctor of Science, Assoc. ...

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... List of complexes . List of structures of RNA-protein and DNA-protein complexes . ... Experimental method: all X-RAY DIFFRACTION SOLUTION NMR ELECTRON MICROSCOPY FIBER DIFFRACTION SOLUTION NMR; THEORETICAL MODEL SOLUTION NMR; SOLUTION SCATTERING . Kind: all rna dna hybrid . ... HYDROLASE/DNA . X-RAY DIFFRACTION . ... dna . ... RNA BINDING PROTEIN/RNA . ... rna . ... HYDROLASE/RNA/DNA . ... HYDROLASE/RNA . ... TRANSFERASE/RNA/DNA . ... TRANSFERASE/DNA/RNA . ... NPIDB team 2003 - 2016 . ...

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• NPIDB: 5DPK structure
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