... Parsimony method . ... It is based on the following principle: the ancestral sequences (posed in nodes of a phylogenetic tree) should be such that the minimal required number of character replacements on the branches of the tree is less than for any other choice of sequences. ... If the preliminary character of the node is * , but the output character of its immediate ancestor is some letter (say, X ), and its set of possible characters contains X , then the output character of the node is also X . ...

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• Inquiry information || Rule of four sequences

... A regular expression (regex) is a powerful way of specifying a complex search. MySQL uses regular Henry Spencer's inplementation of regular expressions. ... MySQL uses the extended version. This is a simplistic reference that skips the details. To get more exact information, see Henry Spencer's regex(7) manual page that is included in the source distribution. ... A regular expression describes a set of strings. The simplest regexp is one that has no special characters in it. ...

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... Accepted input types are: A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. ... Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, U and * are acceptable letters (see below). ...

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... Data conversion . Up: Data type matching and data conversion Next: Communication Modes Previous: Type MPI_CHARACTER . ... On the other hand, MPI requires that a representation conversion be performed when a typed value is transferred across environments that use different representations for the datatype of this value. ... Note that representation conversion may occur when values of type MPI_CHARACTER or MPI_CHAR are transferred, for example, from an EBCDIC encoding to an ASCII encoding.) ...

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... 2015 October 7 . La Palma Eclipse Sequence . ... Explanation: At left, a dramatic image sequence follows late September's total lunar eclipse above a rugged landscape and sea of clouds from the Canary island of La Palma . Composited in a circular fisheye projection, the brightness of the Full Perigee Moon changes drastically in transition from outside the total eclipse phase compared to its dim glow during the 72 minute long totality . ... About APOD | ... A service of: ASD at NASA / GSFC . ...

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IMPALA: Integrating Matrix Profiles And Local Alignments 1. ... Primary preprocessing Prepare the following files : i. a collection of PSI-BLAST-generated profiles with arbitrary names and suffix .chk; ii. a collection of profile master sequences , associated with the profiles , each in a separate file with arbitrary name and a 3 character suffix starting with c; the sequences can have deflines; they need not be sequences in nr or in any other sequence ...

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• http://kodomo.cmm.msu.su/FBB/year_04/doc/BLAST_help/rpsblast.html
• http://kodomo.cmm.msu.su/FBB/year_04/doc/BLAST_help/blastclust.html

I have dropped the differentiation of HTML into a sequence of conformance levels. ... This (and upward compatible specifications) define the Internet Media Type (RFC 1590) and MIME Content Type (RFC 1521) called "text/html". The type "text/html" accepts the following parameters: . ... Character sets . The charset parameter (as defined in section 7.1.1 of RFC 1521) may be used with the text/html content type to specify the encoding used to represent the HTML document as a sequence of bytes. ...

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Detection of short size mutations and copy number alterations in ultra-deep targeted sequencing data Valentina Boeva, Emmanuel Barillot, Institut Curie, valentina.boeva@curie.fr Jean-Francois Laes OncoDNA, jf.laes@oncodna.com The emergence of the amplicon sequencing technique, which followed whole exome sequencing, promises a revolution in cancer diagnostics and treatment. ... Visualization of the typical configuration of read mappings (with Integrative Genomics Viewer). ...

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• OMICS Startup Contest

... unknown) Pattern Modifiers -- Describes possible modifiers in regex patterns . ... If this modifier is set, letters in the pattern match both upper and lower case letters. m (PCRE_MULTILINE) . By default, PCRE treats the subject string as consisting of a single "line" of characters (even if it actually contains several newlines). ... If there are no "\n" characters in a subject string, or no occurrences of ^ or $ in a pattern, setting this modifier has no effect. s (PCRE_DOTALL) . ...

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... Re: may someone tell me how to write the following sentences in russia [ re: CAnEP ] . ... Re: may someone tell me how to write the following sentences in russia [ re: nu3geTC ] . ... Re: may someone tell me how to write the following sentences in russia [ re: DizzyDen ] . ... Re: may someone tell me how to write the following sentences in russia [ re: Spring ] . ...

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Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... Unless in many other approaches to the analysis of different signal coupling, the information entering the analysis of synchronization in our approach is explicitly represented in the form of elementary, instantaneous events (the change-points). ... Hence the use of correlation/coherency estimates in parallel with change-point analysis seems to be quite rational. ...

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• Change-points in EEG components with different pattern
• Change-points at different levels of the hierarchy of EEG segmental...

... A GB (GB1 and GB2) code is a two byte code, where the first byte is in the range $21-$77 (hexadecimal), and the second byte is in the range $21-$7E. A graphical ASCII character is a byte in the range $21-$7E. A non-graphical ASCII character is a byte in the range $0-$20 or of the value $7F. Since the range of a graphical ASCII character overlaps that of a GB byte, a byte in the range $21-$7E is interpreted according to the mode it is in. ... This code switches the mode from GB back to ASCII. ...

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... TWiki ? RegularExpression . Regular expressions (REs), unlike simple queries, allow you to search for text which matches a particular pattern. ... Matches any one letter (not a number and a symbol) . ... Matches one or more uppercase letters . ... A `.' (period) is a one-character regular expression that matches any character except NEWLINE. [string] A non-empty string of characters enclosed in square brackets is a one-character regular expression that matches any one character in that string. ...

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• %TOPICTITLE% (5 vs. 6) - TWiki
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... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Modules . ... Allows the setting of environment variables based on characteristics of the request . ... The mod_setenvif module allows you to set environment variables according to whether different aspects of the request match regular expressions you specify. ... The BrowserMatch is a special cases of the SetEnvIf directive that sets environment variables conditional on the User-Agent HTTP request header. ...

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... x264 is an open source codec of standard MPEG4 AVC/H.264, developed by programmers from all over the world. ... Accumulated during previous frames' compressions statistic is actively used by codec to improve effectiveness of adaptive models. ... These parameters are used only before encoding start, so, our improvements are more significant for short sequences. ... 3 Results of codec x264 modification on "flower" sequence . ... 5 Results of codec x264 modification on "flower" sequence, low bitrates ....

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This module provides the ability to set environment variables based upon attributes of the request. ... The mod_setenvif module allows you to set environment variables according to whether different aspects of the request match regular expressions you specify. ... BrowserMatch . ... Syntax: BrowserMatch regex env-variable [= value ] [ env-variable [= value ]] .. ... Module: mod_setenvif . ... The BrowserMatch directive defines environment variables based on the User-Agent HTTP request header field. ...

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Next: The Stopping Radius in Up: ``Ecology'' of Magnetic Rotators Previous: The Environment of the . Now we consider qualitatively the effect of the electromagnetic field of a magnetic rotator on the accreting plasma. ... What is important is that both relativistic particles and magnetic dipole radiation will transfer their momentum and hence exert pressure on the accreting plasma. ... 2) The pressure of the accreting plasma is high enough to permit the plasma to enter the light cylinder . ...

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• Nomenclature
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... Credit Copyright: Ben Cooper ( Launch Photography ) Explanation: On the morning of November 14, the Moon's umbral shadow tracked across northern Australia before heading into the southern Pacific. Captured from a hilltop some 30 miles west of the outback town of Mount Carbine, Queensland, a series of exposures follows the progress of the total solar eclipse in this dramatic composite image . ... Publications with keywords: total solar eclipse . Publications with words: total solar eclipse . ...

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Encode character sequences in "string" , by mapping characters (or sequences of characters) to an alternative character (or sequence of characters). ... new="tokenlist" . comma-separated list of replacement tokens. ... Example: %SEARCH{ "%ENCODE{ "string with "quotes"" type="quotes" }%" noheader="on" }% When using old and new , be aware that the results of applying earlier tokens are not processed again using later tokens. ... This topic: System > WebHome > Macros > VarENCODE . ...

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... The zonal factor and different agricultural treatments influence of the toxicity of atrazine applied to the soil media was investigated on the example of wheat plants. ... The results of these investigation allowed me to draw a conclusion that the soils enriched with organic matter and the virgin soils (without agronomic treatment) are characterized by a minimum toxic effect of atrazine on the wheat plants. ...

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• Entrance Examinations - Preliminary Round
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