. SDPpred: a tool for prediction of amino acid residues . that determine differences in functional specificity of homologous proteins .

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• SDPpred

... Many protein families contain homologous proteins that have a common biological function but different specificity. Given a multiple sequence alignment of a family divided into specificity groups, SDPpred predicts a set of alignment positions ( SDP, Specificity-Determining Positions ) that determine differences in the functional specificity. ... 2004) Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families. ...

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• SDPlight
• SDPsite - Algorithm Format requirements

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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NonPEST : a nonparametric method for Transcription Start Site prediction Tatiana Tatarinova, Laboratory of Applied Pharmacokinetics, University of Southern California , Los Angeles, USA, Tatiana.tatarinova@lapk.org Alyona Chubatiuk Department of Mathematics, University of Southern California , Los Angeles, California , USA , achubatiu@usc.edu Michael Neely Laboratory of Applied Pharmacokinetics, University of Southern ... NonPEST was able to predict positions of TSS for 13,208 loci. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/136.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/244.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/66.pdf

MAKING THE PROFILES . First of all you are expected to load a FITS file ("FILE"-"LOAD"). ... By pressing the middle button you copy the profile from the first profile window to the second one. ... An example: first integral can correspond to the profile of active region and second integral can correspond to the profile of quiet chromospheric region. ... The second profile (which is subtracted from the first one) you extract after clicking on "SUBTRACT"-"MARK QUIET PROFILE" and marking the region. ...

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• jo0053
• jg0040
• jg0005

... Zelikin Mikhail Ilych . Deputy Head of the Department . ... general theory of optimal control, homogeneous spaces and Riccati differential equations, qualititative theory of differential and finite-difference equations, integrable systems, differential games, optimal synthesis with chattering, minimization of multiple integrals. ... 119992 Moscow, GSP-1, Leninskie Gory, MSU, mechanics and mathematics department, OPU, Room 13-14 . ...

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• Andrei Vladimirovich Fursikov | Department: General Problems of Control.
• Current staff list | Department: General Problems of Control. Faculty of
• Demidovich Vasiliy Borisovich | Department: General Problems of Control.

... day commit -- a lot of changes fasta.py: universal save_fasta() determine_long_line -- for determine length of fasta sequence string in user input everywhere: standart long_line=60 -- 70 blocK. sequences _chains: returns sequences in order as in project added monomer pdb_secstr to store secondary structure pdb adding: some improvements and fixes fix in from_pdb_ chain : use all peptides, not only first ... 22 * self.positions -- sorted list of positions of the project.alignment that . ...

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• allpy: 9adbec7c3366 lib/block.py
• allpy: lib/block.py annotate
• allpy: ea3113da42ca lib/project.py

Routines can now be called with keyword arguments and can use default arguments, that means that some arguments can be given with keywords instead of position and some do not have to be given at all, in which case a standard or default value is used. ... IMPLICIT NONE INTERFACE SUBROUTINE SOLVE (A, B, N) INTEGER, INTENT (IN) : : N REAL, INTENT(OUT) : : A REAL, INTENT(IN), OPTIONAL : : B END SUBROUTINE SOLVE END INTERFACE REAL X ! ... You will use keyword arguments and default arguments so that . ...

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• Dynamic HTML in Communicator
• Background color examples
• Long description for example illustrating positioning with respect to a

... Introduction As is well known, according to Special Relativity (SR) a transition from an immovable reference system to any moving one may by interpreted as some rotation in the Minkowski space. ... In fact, when we come from an immovable reference system to any moving one, the tme axis turns on the angle depending on velocity, and the light world line must stay the bisectrix. ... Besides, the new distances along the new time axis between light cones will not equal to the old ones. ...

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... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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... 5-substituted pyrazolidines with nature a -amino acids acyl radicals in position 1 . Abstract The early unknown 5-hydroxipyrazolidines with natural a - amino acid substituted in position 1 was obtained. Methoxy- and tert -butoxycarbonyl group was used for protection of amino acids. ... Moscow University Chemistry Bulletin . 2004, Vol. ... 4, P. 267 . Copyright (C) Chemistry Dept., Moscow State University, 2002 . ... Copyright (C) Chemisty Department of Moscow State University . ...

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• Moscow University Chemistry Bulletin Vol. 49, No. 4, P. 274 (2008)
• Moscow University Chemistry Bulletin Vol. 55, No. 3, P. 187 (2014)
• Moscow University Chemistry Bulletin Vol. 42, No. 1, P. 22 (2001)

... Block DNA GyrB" shows the score of pairs Lys|Lys, Lys|Arg and Lys|Ser respectively, from a block constituted by amino acid sequences from the same protein (DNAGyraseB), but from different organisms, for example GYRB_ECOLI, GYRB_YERPE (yeast), GYRB_HEINE, GYRB_MUSC (mouse). Block 200 illustrates the score of these pairs from 200 different blocks constituted by sequences from differnet organisms. ... Between the values of single BLock the differences are smaller than between the values of Blosum62. ...

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• Changeset 28:4ef6336d1707 for tanchiki тАУ Tanchiki
• Changeset 28:4ef6336d1707 тАУ Tanchiki
• Changeset 20:ee776b889df7 тАУ Tanchiki

the GNU General Public License v2 # $Id$ EAPI=5 QT5_MODULE= qtlocation inherit qt5-build DESCRIPTION= Physical position determination library for the Qt5 framework if [[ ${QT5_BUILD_TYPE} == release ]]; then KEYWORDS= amd64 arm ~hppa ppc64 ~x86 fi # TODO: src / plugins / position /gypsy IUSE= geoclue qml RDEPEND = ~ dev-qt /qtcore-${PV} geoclue ? ( app-misc/ geoclue :0 dev-libs/glib:2 ) ...

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• http://mirror.msu.net/pub/gentoo-portage/media-video/mplayer-resume/mplayer-resume-2.0.ebuild
• http://mirror.msu.net/pub/gentoo-portage/sci-mathematics/rstudio/files/rstudio-server.conf
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc191.txt

... HISTORICAL SCIENCE ABOARD . ... The author, studying historical realities on the basis of archival sources, reflects on a role of archives in the historiography development, about reliability and authenticity of sources. ... The author, based on sources available in the domestic historiography and the literature, analyzes the participation of the USSR in the war in Afghanistan, reveals the direct and remote consequences of this war for historical destiny of the USSR, and then Russia. ...

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Электронная библиотека Попечительского совета . ... Bao-Yen Tsui J. - Fundamentals of Global Positioning System Receivers: A Software Approach . ... Название: Fundamentals of Global Positioning System Receivers: A Software Approach . Автор: Bao-Yen Tsui J. Аннотация: . ... The Second Edition of this acclaimed publication enables readers to understand and apply the complex operation principles of global positioning system (GPS) receivers. ... GPS receiver related subjects . ...

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• Dowling L.W. - Projective Geometry :: Электронная библиотека попечительского
• Поиск книг, содержащих General position :: Электронная библиотека
• Поиск книг, содержащих Method of undetermined coefficients :: Электронная

... Academician of RAS, Professor . Algebraic topology, integrable systems . ... Docent, PhD . alania at mech.math.msu.su . Algebraic topology, low-dimensional topology . ... Dr. of Science, PhD . ... Algebraic topology . ... Algebraic topology, integrable systems, combinatorics . ... Low-dimensional topology, integrable systems . ... Algebraic topology, combinatorics . ... Integrable systems . ... Algebraic topology, topology of manifolds, combinatorics . ... Geometry, integrable systems . ...

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... This information is needed for description of interaction of atom and ion with charge particles and photons. ... The project calculations are based on variational method and wave function expansion in a linear combination of hydrogen - like functions with effective charges. wave function of atoms, wave function of ions, cross section calculations, helium-like, variational method, Hartree - Fock, excited states, ionization, single excitation, double ionization, double excitation . ...

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Another mechanical model of parametrically excited pendulum and stabilization of its inverted equilibrium position Anton O. Belyakov 1 Lomonosov Moscow State University 2 Vienna University of Technology 8th European Nonlinear Dynamics Conference (ENOC 2014) Vienna, July 7, 2014 Scheme of a parametric pendulum y O l (t ) - g m 2 r1 + m 2 Equations of motion mr 2 1 d d2 + c1 + m g l (t ) sin () = 0 dt 2 dt (1) Dimensionless equation Three dimensionless parameters and ...

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• http://belyakov.imec.msu.ru/papers/ENOC2014.pdf
• http://belyakov.imec.msu.ru/papers/0910.3802.pdf
• http://belyakov.imec.msu.ru/papers/ENOC2008.pdf

Multiple Charged Constituents in Suwannee River Natural Organic Matter Andras Gaspar1, Erast V. Kunenkov2, Richard Lock3, Michael Desor4, Irina Perminova2, Philippe ... Environmental Health, andras.gaspar@helmholtz-muenchen.de 2 Leninskie Gory 1-3, 119992 Moscow, Russia 3 4 Keywords: organic matter, FTICR /MS, Ion mobility MS, charge state, molecular formulas 1 ... Therefore the molecular level understanding of such supermixtures is extremely difficult. ... Chem., ...

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• http://www.mgumus.chem.msu.ru/publication/2008/2008-sorkina-synthesis.pdf
• http://www.mgumus.chem.msu.ru/publication/2008/2008-kunenkov-effective.pdf
• http://www.mgumus.chem.msu.ru/publication/2010/2010-vladimirov-combination.pdf

... Keywords. conservative system, stability b oundary, singularity, multiple eigenvalue, p erturbation. ... Because of continuous dependence of eigenvalues on parameters a boundary of the stability domain is determined by the zero eigenvalue, while all other eigenvalues are positive. ... Using the results of Arnold [1] and a perturbation technique for eigenvalues [3, 9], a classification of singularities of stability boundaries in the generic case is obtained. ...

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• http://mailybaev.imec.msu.ru/papers/Mailybaev2001b.pdf
• http://mailybaev.imec.msu.ru/papers/MailybaevSeyranian2000.pdf
• http://mailybaev.imec.msu.ru/papers/MailybaevSeyranian2001.pdf