... 19 def is_good_window ( window ): . ... 25 blocks = [] . 26 in_block = False . ... 29 in_block , was_in_block = is_good_window ( window ), in_block . 30 if in_block and not was_in_block : . ... Block . from_alignment ( alignment , columns = list ( window )) . ... 33 elif in_block : . ... 37 def blocks_markup ( alignment , blocks ): . ... 41 for column in block . ... in_block for column in alignment . ... 50 blocks = find_runs ( alignment ) . ... 57 blocks_markup ( alignment , blocks ), . ...

Еще в разделе: (Показать все результаты (>29282) - kodomo.fbb.msu.ru/ )

• allpy: ca0b757452da test/usecase1.py
• allpy: 43b5207a70d7 test/usecase1.py
• allpy: 43b5207a70d7 test/usecase2.py

... Sequence conservation . ... 7 PDB entries containing coordinates of HTH3 domains were used in this study. These entries represent 4 proteins from two bacteriphages: phage lambda and phage 434. ... Lambda C1 repressor . Bacteriophage lambda . ... 434 C1 repressor . ... Line Aligned shows whether the respective residues are aligned on structural alignment, A stands for aligned residues, L stands for second structure elements which are similarly arranged in space, but actually cannot be aligned. ...

Еще в разделе: (Показать все результаты (>243) - monkey.belozersky.msu.ru/ )

• ETS numeration assumed
• Homeodomain numeration assumed

Alignment DNA issues are still actual in modern genetics. Known algorithms (for example, heuristic algorithm used by BLAST software, Needleman­Wunsch algorithm) are provide solution, but possible are not completely optimal by speed, computational resources or don't provide fullness search (needed accuracy) for solution finding. ... In this paper a method that can ensure absolute accuracy, is presented. ... Known methods of alignments are discussed and demonstrated. ...

Еще в разделе: (Показать все результаты (>101) - mccmb.belozersky.msu.ru/ )

. Album : asv-album :: Travels to distant places and countries :: 1997/08 Kyoto, Nara (Japan) :: 23/08 Ryoanji Temple and around . Up . << Prev . A bug which produces loud high-pitched noise. The actual length is about 5-6 cm. Next >> . Created with the tool album generator a MarginalHack by David on Tue Jun 23 14:46:19 2015 .

Еще в разделе: (Показать все результаты (>972) - crydee.sai.msu.ru/ )

• Image: You probably get bored to see hotel again :-) But actually, there wasn't
• Image: I believe this is the actual Otani shrine. Otani was a monk who founded
• Image: Good bye, Chalkidiki! . Oh, sorry, it is actually a greeting to who

Электронная библиотека Попечительского совета . ... Otteson J.R. - Actual Ethics . ... Название: Actual Ethics . Автор: Otteson J.R. Аннотация: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

Еще в разделе: (Показать все результаты (>3975) - lib.mexmat.ru/ )

• Actual Test: Implementing, Managing and Maintaining a MS Windows Server 2003
• Hoque F. - The Alignment Effect: How to Get Real Business Value Out of
• Al-Hakim L., Memmola M. - Business web strategy: design, alignment and

. A program for alignment of structures of DNA-protein complexes . Home . Feedback . Help . About . Input PDB code of the first complex: and chain of the protein (optional): . Input PDB code of the second complex: and chain of the protein (optional): . If you get stuck with program input, try example data and click Align! Example data . 2016

Еще в разделе: (Показать все результаты (>22) - mouse.genebee.msu.ru/ )

• StructAlign help
• ConClus

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

Еще в разделе: (Показать все результаты (>6979) - mouse.belozersky.msu.ru/ )

• SVETKA, a program for multiple sequence alignments analysis
• Example of alignment
• Alignment example

... In this case both the medium and the electric field depend on two space coordinates only. ... The classical modeling presentation is in apparent resistivity which reflects an electric field distribution on the earth's surface. ... An expression can be derived for the potential value in point M ([pic]): [pic], (4) where [pic] is the potential of the primary electric field, [pic] is the potential of the secondary electric field, defined by the surface charge distribution. ... pic] |[pic] | ...

Еще в разделе: (Показать все результаты (>31) - geophys.geol.msu.ru/ )

NETWORK WORKING GROUP E. FORMAN REQUEST FOR COMMENTS # 274 MITRE NIC # 7901 1 November 1971 CATEGORIES F, G UPDATES: NONE OBSOLETES: NONE ESTABLISHING A LOCAL GUIDE FOR NETWORK USAGE Actual experiences and experimentation with network systems and subsystems will be an important supplement to existing NIC documentation. ... Sites will be included in the Guide as local users gain experience with systems and subsystems located at the remote sites. ...

Еще в разделе: (Показать все результаты (>10730) - mirror.msu.net/ )

• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc274.txt.pdf
• http://mirror.msu.net/pub/gentoo-portage/dev-java/javacup/javacup-0.11a_beta20060608.ebuild
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc181.txt

IMPALA: Integrating Matrix Profiles And Local Alignments 1. ... Primary preprocessing Prepare the following files : i. a collection of PSI-BLAST-generated profiles with arbitrary names and suffix .chk; ii. a collection of profile master sequences , associated with the profiles , each in a separate file with arbitrary name and a 3 character suffix starting with c; the sequences can have deflines; they need not be sequences in nr or in any other sequence ...

Еще в разделе: (Показать все результаты (>2387) - kodomo.cmm.msu.ru/ )

• http://kodomo.cmm.msu.su/FBB/year_04/doc/BLAST_help/megablast.html
• Result summary blast-20091031-1941229237
• Global and Local Alignment of A.A Sequences

... The legs didn?t ride up high, plenty of shorts get. ... Mixing and matching layers and turning shirts into dresses have the ability to belts are not the same ways things whole new outfits, . ... 7) Turn the radio off. Unless you?re scoping out the sound system, leave the radio off. Is actually why so frequency higher any unusual noises. Maybe even turn the A/C on and off and search for noises there as excellent. ...

Еще в разделе: (Показать все результаты (>41) - elana.sinp.msu.ru/ )

• editor | С Днем Победы!

Welcome to TWiki.. ... People . ... TWikiContributor 2 - 2005-09-22 - Main.TWikiContributor . ... Changed: . Not an actual user of this site, but a person devoting some of his/her time to contribute to the Open Source TWiki project. TWikiContributor lists the people involved. ... name="ALLOWTOPICCHANGE" title="ALLOWTOPICCHANGE" type="Set" value="TWikiAdminGroup" . ... r2 - 2005-09-22 - 10:52:04 - TWikiContributor . ... Copyright &© by the contributing authors. ...

Еще в разделе: (Показать все результаты (>28145) - dualopt1.cmm.msu.ru/ )

• %TOPICTITLE% (36 vs. 37) - TWiki
• %TOPICTITLE% (3 vs. 4) - TWiki
• VarREVINFO2 - TWiki - TWiki - (printable)

... VersiСn 2.0 del Servidor HTTP Apache . ... Apache ofrece la posibilidad de que los webmasters puedan configurar las respuestas que muestra el servidor Apache cuando se producen algunos errores o problemas. Las respuestas personalizadas pueden definirse para activarse en caso de que el servidor detecte un error o problema. ... La sintaxis es, . ... El comportamiento de Apache en cuanto a las redirecciones ha cambiado para que puedan usarse mАs variables de entorno con los script/server-include. ...

Еще в разделе: (Показать все результаты (>176) - itpm.msu.su/ )

• Supported Boards
• Formatting
• The Inner Workings of uucico

Given word length and max number of mismatches . Use MEME algorithm for define conserved blocks . Apply the Dynamic programming algorithm to create chain of the blocks . Refine the chain using combined profile for chain of blocks. ... Reduce word length and number of mismatches and repeat the procedure for spacer between the blocks. ... Create helix profile and apply MEME-like iterative procedure to find sets of helices that consistent lokated reative to conserved blocks . ...

Еще в разделе: (Показать все результаты (>16) - bioinf.fbb.msu.ru/ )

• Alignment example
• SDPpred
• Site Cluster

. Небо из стали (1989) . Осень(1993) . Потеря любви (1993) . Невесомый ангел (1990) . Сон (1993) . Зной (1990) . Полночный бог (1995) . Old Salem (1994) . Chain Me To Your Smile (1994) . Trish (1991) . Agna (1992) . Silence (1995) . Dream Catcher (1995) . Behind The Sweet Line (1995) . Rolling Rings (1995) . One says (1993) .

Еще в разделе: (Показать все результаты (>29) - comet.sai.msu.ru/ )

• Understanding UNIX files
• Removing files that have links
• trap: Handling command lists

... 2008. NONHOLONOMIC MECHANICS Gauss Principle and Realization of Constraints V. V. Kozlov* V.A. Steklov Institute of Mathematics, Russian Academy of Sciences, ul. ... From (3) it immediately follows that an actual motion is a virtual one. ... x (10) If one considers this relation as a definition of virtual motions, then the generalized Gauss principle leads to the equation x=- Е ,x x, (x, x) V x which also has the integral of energy, but differs from the initial equation (9). ...

Еще в разделе: (Показать все результаты (>87) - ics.org.ru/ )

... Chem , Russian Journal of Coordination Chemistry , Russian Journal of Coordination Chemistry / Koordinatsionnaya Khimiya показать полностью.. Russian Journal of Coordination Chemistry / Koordinatsionnaya Khimiya , Russian Journal of Coordination Chemistry/Koordinatsionnaya Khimiya, издательство Nauka/Interperiodica Publishing (Russian Federation) . ... Местоположение издательства: Russian Federation . ...

Еще в разделе: (Показать все результаты (>460) - istina.msu.ru/ )

• Coordination Chemistry Reviews - журнал | ИСТИНА - Интеллектуальная Система
• Salakhov Myakzyum Kh - сотрудник | ИСТИНА - Интеллектуальная Система
• Orlinskii Sergei B. - сотрудник | ИСТИНА - Интеллектуальная Система

... Workshop 1: Byzantine-Orthodox traditions as cultural patterns in the history of Eastern Europe . ... Invited speaker: A. Miller (CEU History Department) . Workshop 3: Intelligentsia and revolutionary movements in Eastern Europe in 1800 -1917 . ... Invited speaker: M. Janowski )CEU History Department) . ... Workshop 5: Religion, nation, intelligentsia, revolution, cultural innovations, and the sciences in history of Eastern Europe: what should be changed in our university curricula? ...

Еще в разделе: (Показать все результаты (>42) - hist.msu.ru/ )

• "Novaya i noveishaia istoria" Journal
• Department of Ancient History

... Applications of Molecular Mechanics to Metal Complexes" . ... Molecular mechanics study of the mixed-ligand lanthanide complexes using Gillespie-Kepert model . ... Within MM-GK, the same parameters are applicable to complexes of different coordination numbers/polyhedra. ... Gillespie-Kepert model . ... Using derived computational parameters, we calculated the geometry of 39 lanthanide ion nonaaqua complexes, 6 octaaqua complexes and 18 beta- diketonate and aqua-beta-diketonate complexes. ...

Еще в разделе: (Показать все результаты (>21) - analyt.chem.msu.ru/ )

• The Molecular Mechanic Approach to Coordination Compounds: Force Field Based on

. Enter Coordinates in Deg Min Sec . DD MM SS . GPS Coordinates deg min . Decimal Degrees . Enter a Coord in Decimal Degrees: . GPS Coordinates deg min . DDMMSS DD MM SS . Enter a Coord in GPS Coords: deg min . Decimal Degrees . DDMMSS DD MM SS .

Еще в разделе: (Показать все результаты (>56) - herba.msu.ru/ )

• Materials of A. Shipunov