Node ID 38888b46c342b9f51d12d4cd92947da07c7ad2c9 # Parent 2a6c2cffa891feca550fd7f18a9ad461600150c2 Added usecases from wiki to test / directory diff -r 2a6c2cffa891 -r 38888b46c342 test /usecase1.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ test /usecase1.py Fri Dec 17 00:45:20 2010 +0300 @@ -0,0 +1,35 @@ +from allpy import protein + +# Create sequences from string representation ...

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• allpy: 38888b46c342
• allpy: 38888b46c342 test/usecase1.py
• allpy: 890fc647f69c test/usecase1.py

The Linux System Administrators' Guide . ... The /etc directory contains a lot of files. ... See the chapter on init for further information. /etc/passwd . ... See the setfdprm manual page for more information. /etc/fstab . Lists the filesystems mounted automatically at startup by the mount -a command (in /etc/rc or equivalent startup file). ... See the magic and file manual pages for more information. /etc/motd . ... Files executed at login or startup time by the Bourne or C shells. ...

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• Overview of the Directory Tree
• Per-user web directories - Apache HTTP Server

. To remove a directory that is a symbolic link that points to another directory use the command: rm directory_name . Notice that the directory does not need to be empty and you do not have to use the rmdir command. You are not really removing a directory, just a named symbolic link that points to the "real" directory.

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• Examples of using the ls command
• Example of comparing directories with the diff command
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IMPALA: Integrating Matrix Profiles And Local Alignments 1. ... Primary preprocessing Prepare the following files : i. a collection of PSI-BLAST-generated profiles with arbitrary names and suffix .chk; ii. a collection of profile master sequences , associated with the profiles , each in a separate file with arbitrary name and a 3 character suffix starting with c; the sequences can have deflines; they need not be sequences in nr or in any other sequence ...

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• http://kodomo.cmm.msu.ru/~plazmoliz/Term3/sup/man_ls.help
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Электронная библиотека Попечительского совета . ... Taylor D., Jepson B. - Learning Unix for Mac OS X Panther . ... Название: Learning Unix for Mac OS X Panther . Авторы: Taylor D., Jepson B. Аннотация: . ... This edition covers the Panther version of Mac OS X. Язык: . ... books, about Mac OS X 2nd . ... books, about Unix . books, about Unix security . ... Common Unix Printing System (CUPS) . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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All Firefly versions can take optional command line arguments. ... firefly [optional command line options in any order] [optional list of working directories] . ... The list of most widely used command line options is given below: . ... Disables validity check of the command line arguments (e.g., check for valid names of files and directories, etc...) passed to Firefly. ... However, if this option is not given, one must provide the list of working directories when running Firefly in parallel mode. ...

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RFC 775 Directory oriented FTP commands Page 1 DIRECTORY ORIENTED FTP COMMANDS David Mankins (dm@bbn-unix) Dan Franklin (dan@bbn-unix) A. D. Owen (ADOwen@bbnd) As a part of the Remote Site Maintenance (RSM) project for ARPA, BBN has installed and maintains the software of several DEC PDP- 11s running the Unix operating system. ... We have added four commands to our server: XMKD child Make a directory with the name "child". ... The reply codes for XMKD, however, are a bit more complicated. ...

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Welcome , Registration , and other StartingPoints ; TWiki history & Wiki style; All the docs.. ... Changed: . ... TWiki is written in Perl 5 and also uses some shell commands . ... RCS (for revision control) must be installed on the system. ... You can easily rename the root TWiki directory - twiki - to whatever you like by changing it in the twiki.cfg configuration file. ... list . ... twiki/lib/TWiki/Plugins . ... Back-end storage, *.txt text file and *.txt,v RCS repository file handling . ...

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• TWikiSystemRequirements - TWiki - TWiki

... OK ======================================= To compile CompHEP input make command ======================================= make # command output : ****************************************************************** * CompHEP -4.4p3 has been successfully built * * * * Please create a user working directory using the command * * make setup WDIR=path_to_your_user_work_dir * * NOTE: Do not use '~' to refer to home ... CompHEP-interfaces-1.0.1 has been installed successfully!! ...

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• Atlas

filecommander (2.50-alpha24) squeeze; urgency=low * Alpha 24 - Fix crash at shutdown of remote session. - Implement the xterm control sequence CSI 6n, allowing the unix resize command to work. - Some minor enhancements to Synchronize: - Support Ctrl-Break to stop directory scan. - Include "Source" or "Target" in the scan progress box. - Fix hot keys. - Add a progress dialog for the "Comparing" stage. - Speed up sorting of sync operation list by ~4x. -- Brian Havard Mon, 09 Nov 2015

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• crydee.sai.msu.ru archive : Directory tree
• Index of /ftproot/pub/rec/music/lyrics/cs-uwp/d/durutti.column

SVETKA, a program for Analysis of Multiple Sequence Alignments . ... Analyse your alignment . ... Alignment . Nota Bene! .aln or .fasta format required!! Look here for comments . ... Nota Bene! Special scheme format required! ... Development of the program is supported by Ministry of Education and Science of the Russian Federation (State Contract No. ...

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• S : rm_systems
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SVETKA, a program for analysis of different alignments . Back to the help page . ... Such a feature can look like " Leucine in the position 362 of the alignment of the entire family " and can, in many cases, be a "decision rule" to distinguish sequences from two sides of a tree branch. ... Comparing the alignment with an input tree (the tree may be entered by the user or reconstructed with the WPGMA algorithm), the program detects supporting positions of the alignment for every branch the tree. ...

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• SVETKA, a program for multiple sequence alignments analysus
• SVETKA, a program for multiple sequence alignments analysis
• ETS sequence conservation

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• Input Formats
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install ]] . ... Installation of a user directory . ... Below, we use the following notations: XXXX - CompHEP version number; comphep-XXXX - directory where CompHEP files will live; comphep-XXXX.tgz - distributive tar-file with sources; comphep-XXXX-linux.tgz - distributive tar-file with binaries; . ... The directory with name comphep-XXXX will be created with all files of CompHEP distributive. ... In order to create a user working directory execute: make setup WDIR=path_to_user_work_directory . ...

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Application of evolutionary model in the evaluation of the quality of pair wise alignment of amino acid sequences Valery Polyanovsky, V. G. Tumanyan Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991 Russia ... : polyanovskyvo@mailfrom.ru, tuman@eimb.ru The purpose of the work is to develop a universal method for estimating the pairwise alignment quality depending on the evolutionary distance (degree of homology) between the ... REFERENCES 1. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/161.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/164.pdf
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Name Last modified Size Description . Parent Directory - O-spectralnyh-posledovatelnostiah-tipa-Adamsa.pdf 06-Apr-2011 23:06 1.3M Spectral sequences of Adams type.pdf 23-Oct-2007 09:09 319K . Apache/2.2.10 (Linux/SUSE) Server at higeom.math.msu.su Port 80

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Lomonosov Moscow State University . ... Academic Programs . Academic Board . International Cooperation . ... Academic Departments Programs . ... Bulletin of Moscow University . ... Contact Us . Phone Email Directory . ... Phone: (495) 734 03 22 . Fax: (495) 932 88 67 . ... Phone: (495) 932 99 15 . ... Faculty of Foreign Languages and Area Studies Lomonosov Moscow State University: . ... 2000 - 2016 Faculty of Foreign Languages and Area Studies Lomonosov Moscow State University . ...

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... If this bit of homework finds be also mind-boggling, contemplating working through on line wholesale directory like Salehoo to support in your lookup. ... celine outlet italia , because these brands are high quality and put on weight no need to re-emphasize that unless they?re selling high resolution replica bags or issue. burberry bag charm in along with large wholesale fashion designer bags. ... 2016 С Днем Победы! ...

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• editor | С Днем Победы!

ERROR: You need to create the directory /home/www/hist/vledata with web server write access . ... В настоящее время материалы дистанционной поддержки к курсам, читающимся на историческом факультете МГУ им. М.В.Ломоносова, вы можете найти по адресу: vle.hist.msu.ru Skip Calendar . ...

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. Name . Last Modified . Size . Type . Parent Directory / . - . Directory . asm / . 2016-Feb-21 14:32:38 . - . Directory . atmos / . 2015-Dec-21 19:17:42 . - . Directory . avrup / . 2010-Apr-24 21:34:09 . - . Directory . mirror / . 2009-Dec-06 17:57:48 . - . Directory . rs485 / . 2015-Feb-03 20:07:40 . - . Directory . sv / . 2009-Nov-26 18:26:21 . - . Directory . turbina / . 2009-Nov-26 18:14:43 . - . Directory . lighttpd/1.4.37

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• Index of /pub/mirror/
• Index of /pub/mirror/suse/
• Index of /pub/atmos/