... annotate . ... 3 This release collects a lot of changes that happened during half year . ... 8 * greatly improved markups support and markups IO . ... 12 * and a lot of work on ` blocks3d ` and ` pair_cores ` with many new features , . ... 39 * new : added ` MarkupIOMixin ` which simplifies defining savable markup classes . ... 40 * new : added pre - defined generic markups for simple data types ( int , char , . ... 69 * new : File format 'markup' for storing alignment with arbitrary markups . ...

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S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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. A program for alignment of structures of DNA-protein complexes . Home . Feedback . Help . About . Input PDB code of the first complex: and chain of the protein (optional): . Input PDB code of the second complex: and chain of the protein (optional): . If you get stuck with program input, try example data and click Align! Example data . 2016

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• ConClus
• StructAlign help

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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• PLANdbAffy: probe-level annotation database for Affymetrix expression
• wLake program homepage
• S : rm_systems

Электронная библиотека Попечительского совета . ... Peters C.A., Steenbrink J.H. - Mixed Hodge Structures . ... Название: Mixed Hodge Structures . Авторы: Peters C.A., Steenbrink J.H. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Lathrop R.H., Rogers Jr R.G., Smith T.F. - A Bayes-optimal sequence-structure
• Eisenberg D., Kauzmann W. - The Structure and Properties of Water ::
• Panasenko G.P. - Multiscale Modelling for Structures and Composites ::

... annotate . ... ksenia_yashina@8 . ... 6 def __init__ ( self , delay = 10 , diam = 300 , num = 1 , env = 1 , reprod_a = False , reprod_s = False , life = 1 ): . ... 7 self . ... 15 def __repr__ ( self ): . ... 16 return "< %s , %s , %s , %s , %s , %s , %s >" % ( self . delay , self . diam , self . ... config ( text = "Stop" , command = self . ... config ( height = self . ... grid ( row = 0 , column = 2 , rowspan = 6 , padx = 50 , pady = 10 ) . ... config ( text = "Submit" , command = self . ...

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• petri_dish: Petri.py annotate
• petri_dish: Bacteria.py annotate
• petri_dish: tk1.py annotate

... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Genebee Predicted Annotation - Advanced
• GeneBee
• Screening of pattern or alignment against PROTEIN databank

RnaViz . RnaViz is a user-friendly, portable, windows-type program for producing publication-quality secondary structure drawings of RNA molecules. Drawings can be created starting from DCSE alignment files if they incorporate structure information or from mfold ct files. The layout of a structure can be changed easily. ... Home Site: . http://rrna.uia.ac.be/rnaviz/ . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

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• SAL- Other Scientific Fields - Chemistry, Biology Related - DCSE
• SAL- Other Scientific Fields - Chemistry, Biology Related - Protein Structure
• APOD: 2013 May 19 - Earths Richat Structure

... История кафедры . ... младших курсов . ... Уважаемые студенты 1-го, 2-го и 3-го курсов! ... Семинар кафедры проходит по пятницам в 15.20 в комн. ... а также на стендах кафедры на 2-м и 4-м этажах. Информацию о более ранних событиях см. в разделе "Жизнь кафедры" . ... 119991, Москва, Ленинские горы, д.1, стр.2, МГУ имени М.В.Ломоносова, физический факультет, кафедра фотоники и физики микроволн . ...

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SCIENTIFIC TASKS AND RESULTS . In the results of searching for new perspective solid state materials for the quantum electronics, non-linear optics and other fields of physics more than 200 various oxide compounds were synthesized and peculiarities of their atomic structure and physical properties are studied. Single crystals of 80 such the compounds are grown and thoroughly investigated. ... A family of oxide-ion conductors on the base of La 2 Mo 2 O 9 (30.10.09) . ... Main page ...

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Key-words: rhythm, stress, syllable, rhythmic structure, syntagm, utterance, prosody, speech production, speech perception . ... In speech communication, RS are both units of speech production and speech perception. ... The research of speech rhythm in diachrony and synchrony consists of the analysis and the description of speech rhythmic units concerning Old Church Slavonic, Old Russian, Old High German in diachrony and Modern Russian, German, Czech and Bulgarian in synchrony. ...

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... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• Site Cluster
• SDPsite
• RNA Kinetics: Result explanation

Sequence alignment of non-superposable beta-sheets Evgeniy Aksianov Belozersky Institute, Lomonosov Moscow State University, Leninskie Gori 1, Moscow, Russia, evaksianov@gmail.com Andrey V. Alexeevski Belozersky Institute, Lomonosov Moscow State University, Scientific Research Institute for System Studies (NIISI RAN), Moscow, Russia aba@belozersky.msu.ru Protein 3D structures usually are more conserved than their sequences. ... Beta-strands are contained in sheet map rows. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/23.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/167.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/126.pdf

... V.V.Shevchenko, Sternberg State Astronomical Institute, Moscow University, Universitetsky 13, Moscow 119899, Russia, shev@sai.msu.ru . ... 1.Sternberg State Astronomical Institute, 119899, Moscow, Russia. shev@sai.msu.ru . ... V.V.Shevchenko, Sternberg State Astronomical Institute, Moscow University, Moscow 119992, Russia, shev@sai.msu.ru . ... 119992 Moscow, Russia; . ... 2Sternberg Astronomical Institute, Moscow University, Moscow, 119992, Russia, . ... Moscow, 119992, Russia shev@sai.msu.ru . ...

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... Географии мирового хозяйства . ... География" . ... Zilitinkevich, S.S., 1972: On the determination of the height of the Ekman boundary layer. Boundary-Layer Meteorol., 3, 141-145 (160 citations) . Zilitinkevich, S.S., 1975: Comments on "A model of the dynamics of the inversion above a convective boundary layer". ... Boundary-Layer Meteorol., 46, 367-387 (54 citations) . ... Boundary-Layer Meteorol., 81, 325-351 (52 citations) . ... Boundary-Layer Meteorol. 105, 389-409 (36 citations) . ...

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• journal 'GEOGRAPHY, ENVIRONMENT, SUSTAINABILITY'
• Вестник Московского университета. Серия 5. География

Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Structure показать полностью.. ... Str , J. of Molecular Structure , J.Mol.Struct , J.Molecular Structure , Journal Molecular Structure , Journal of Molecular Structure, . ... Panchenko Yu N. , Abramenkov A.V. в журнале Journal of Molecular Structure , издательство Elsevier BV (Netherlands) , том 1108, с. 618-622 DOI . ...

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• Acta Crystallographica Section E: Structure Reports Online - журнал | ИСТИНА -
• PHYSICS OF LOW-DIMENSIONAL STRUCTURES - журнал | ИСТИНА - Интеллектуальная
• Acta Crystallographica Section C: Crystal Structure Communications - журнал |

... G. K. Zhavnerko, V. N. Staroverov, V. E. Agabekov, M. O. Gallyamov, I. V. Yaminsky . ... Atomic force microscopy, ellipsometry, and piezoquartz microweighing techniques were used to study the characteristic of N-octadecyl-3,4:9,10-perylene-bis(dicarboxydiimide) monomolecular layers... <more> . ... The influence of the chemical structure of film-forming material, the pressure of deposition, and the nature of substrate upon the film morphology has been studied by atomic force microscopy... <more> . ...

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• Software structure
• THE STRUCTURE AND PROPERTIES OF MONOMOLECULAR FILMS BASED ON

Annotation: in the article possibilities of psychodynamic analysis of anecdote are exposed in accordance with changes in the structure of subjective psychological time. Keywords: anecdote, psychodynamic of anecdote, subjective time, psychological time, structure of psychological time, color of time. ... 2007 . ... 2009. ...

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• Possibility of Controlling the Algal Community Structure in Laboratory
• Laboratory-chair of Discrete mechanics on a microscopic scale

. annotation of talk . Dr. V.N. Lukash (Astro Space Centre of Lebedev Physics Institute) . Dark energy's action on formation of the large scale structure in the Universe . The focus of this talk is on the dark energy problem. We show that generation of the large scale structure in the Universe proceeds in the period from 1 to 20 Gyrs. Dark energy affects the structure formation dramatically and can be measured "weighting" the structure in time.

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• Structure of the Galaxy
• Accretion Mechanizsm of the Formation of the Large Structure