... annotate . ... 1 import sys . bnagaev@83 . ... 3 from allpy.alignment import Alignment . ... 4 from allpy.block import Block . ... 6 p = Alignment ( open ( 'test.fasta' )) . ... 7 print "alignment length: %i " % len ( p ) . ... 8 print "sequence: %s " % str ( p . sequences [ 0 ]) . ... bnagaev@120 . ... pdb_chain_add ( open ( '1jcc.pdb' ), '1jcc' , 'B' ) . ... pdb_chain_add ( open ( '1kfm.pdb' ), '1kfm' , 'A' ) . ... 19 #~ alignment.process(processors.Muscle()) . ...

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• allpy: allpy/dna.py annotate
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... annotate . ... 6 def __init__ ( self , position , velocity , lifetime , mutated ): . ... 23 def check_collision ( self , bacteria , delta , bact_r , delta_t ): . ... 34 def move ( self , bacteria , delta_t , radius , delta , bact_r ): . ... 40 def collision ( self , other , bacteria , delta_t , radius , delta , bact_r ): . ... 52 def asexual ( self , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 67 def sexual ( self , other , bacteria , delta_t , radius , delta , bact_r , . ...

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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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A.N. Belozersky Institute . Bioinformatics Portal . ... Russian EMBnet Node . ... AliBee - Multiple alignment Release 2.0 . ... Grants information . ... Our Institute is a scientific department of Moscow State University. ... Address: Belozersky Institute,Moscow State University,Leninskie Gory 1,Bldg. ... Information about our activities and EMBnet resources around the World is available here . Information about our educational activities with kids, children and teenagers is available here . ...

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. PHP Manual . Prev . Next . (PHP 4 ) pdf_add_bookmark -- Adds bookmark for current page . int pdf_add_bookmark ( int pdf object, string text [, int parent [, int open]]) . Add a nested bookmark under parent , or a new top-level bookmark if parent = 0. Returns a bookmark descriptor which may be used as parent for subsequent nested bookmarks. If open = 1, child bookmarks will be folded out, and invisible if open = 0. Prev . Home . Next . pdf_add_annotation . Up . pdf_add_launchlink

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Welcome , Registration , and other StartingPoints ; TWiki history & Wiki style; All the docs.. ... CommentPluginTemplate 4 - 2006-12-16 - Main.TWikiContributor . Line: 1 to 1 . ... Line: 261 to 261 . ... Talk using TOC adding on end - TWiki:Main/FranzJosefSilli . Create a list of annotated bookmarks - TWiki:Main/FranzJosefSilli . ... Revision 4 . ... Copyright by the contributing authors. ... Note: Please contribute updates to this topic on TWiki.org at TWiki:TWiki.CommentPluginTemplate . ...

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S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• Inquiry information || Formats of alignments

... 2011/12/09 . ... added alignment merging . added parameter corresponding to the width of output alignment . fixed homologue searching for very long query sequences . ... Copyright 2010-2011 Yury Pekov ...

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... Second, alignment of highly similar genomic sequences is useful for comparison of genome assemblies of the same organism or closely related ones. ... Nucleotide pangenome (NPG) of an input set of genomes is a set of aligned blocks, each block composed of orthologous fragments. ... Hemi-stable blocks (h-blocks) include no more than one fragment of a genome and lack a fragment of at least one of genomes. ... Blocks with repeats (r-blocks) include more than one fragment from one or several genomes. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/42.pdf
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Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ EAPI= 5 LANGS = de pl ru uk inherit cmake-utils git-r3 DESCRIPTION= Qt4 Crossplatform Jabber client HOMEPAGE= http: ... annotations autostatus avatars birthdayreminder bitsofbinary bookmarks captchaforms chatstates clientinfo commands compress console dataforms ...

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... Improvement of Java type compiler using in language independent remote process calls in KBase project. 09/2011 ­ present: Moscow State University, Dept. of Bioengineering and Bioinformatics (Russia) Scientific Research Java developer and lecturer Enhanced the CAMPS web resource (http://webclu.bio.wzw.tum.de/CAMPS2.0/) that enables multiple classification of transmembrane proteins. ... Developed web based UI for visualization of a graph of transmembrane protein families. ... Sutormin RA, Mironov AA. ...

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• http://storage.bioinf.fbb.msu.ru/~mazin/laci.fasta

... Lientz B.P., Larssen L. - Manage IT as a Business: How to Achieve Alignment and Add Value to the Company . ... Название: Manage IT as a Business: How to Achieve Alignment and Add Value to the Company . Авторы: Lientz B.P., Larssen L. Аннотация: . ... Follow these proven recommendations to manage IT as a business that adds value to the company. ... The authors present concrete method to manage IT as a business that adds value to the company . ...

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Warning: This is a collection of pointers (growing since 1994) about me, not a home page! ... My PostgreSQL page (locale support, GiST, tsearch2) . ... OpenFTS full text search engine . ... AstroNet (in Russian) - Knowledge Base on Astronomy . ... nature.web.ru (in Russian) - Scientific network . ... Oren Etzioni's Home Page (Web Clustering) . ... Richard K. Belew home page (AI in search engines) . ... Sabine Mayer home page - staircase join-enhanced PostgreSQL 7.3.3 . ... oleg@sai.msu.su ...

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• About APOD
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. Colleagues Bookmarks 70 birthday photos . Mail to shakura@sai.msu.su . Phone: (095) 939-50-06 .

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Astronomy Picture of the Day . ... 29.12.2001 . ... December 2001 . ... 2001 2002 . ... NASA Web Site Statements, Warnings, and Disclaimers . NASA Official: Jay Norris. ... A service of: LHEA at NASA / GSFC . ... U. Based on Astronomy Picture Of the Day . Publications with keywords: star cluster - nebula - Galactic Center . Publications with words: star cluster - nebula - Galactic Center . ... A Laser Strike at the Galactic Center . ... Young Star Cluster Westerlund 2 . ...

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... Class . ... java.lang.Object java.awt.Component java.awt.Container java.awt.Window java.awt.Frame javax.swing.JFrame methods.SpectrumDataViewerFrame . ... Nested classes inherited from class javax.swing.JFrame . ... Nested classes inherited from class java.awt.Frame . ... Nested classes inherited from class java.awt.Window . ... Nested classes inherited from class java.awt.Container . ... Nested classes inherited from class java.awt.Component . ... package private) java.io.File . ... private void . ...

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SCIENTIFIC TASKS AND RESULTS . In the results of searching for new perspective solid state materials for the quantum electronics, non-linear optics and other fields of physics more than 200 various oxide compounds were synthesized and peculiarities of their atomic structure and physical properties are studied. Single crystals of 80 such the compounds are grown and thoroughly investigated. ... A family of oxide-ion conductors on the base of La 2 Mo 2 O 9 (30.10.09) . ... Main page ...

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... 2016, issue ? 1 : Annotation . ... 1 : Contents . 2015, issue ? ... 2014, issue ? ... 2013, issue ? ... 2012, issue ? ... 2011, issue ? ... 2010, issue ? ... 2009, issue ? ... 2008, issue ? ... Web-site of Russian Journal of Biological Invasions is developed and supported by the . Group of Bioinformatics and Modeling Biological Processes" IPEE RAS . ... Russian Journal of Biological Invasions . ...

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... NASA ADS . ... Astronet . ... Sergei Popov's Bookmarks . ... Russian Academy of Sciences . SETI-site of the Stenberg Astronomical Institute . ... Shvartsman V.F. Gurevich I.M. Panov A.D. Movie Database . ... Subtitles 1 . ... Writers Guild of America . ... Ancient Rome . ...

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An annotated checklist of the insectivores (Mammalia, Lipotyphla) of Vietnam . Abramov A.V., Dang Ngoc Can, Bui Tuan Hai Nguyen Truong Son . P. 57-70 . An annotated checklist of 32 extant species from 12 genera of the insectivores (Mammalia, Lipotyphla) of Vietnam is provided. ...

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