... annotate . ... 3 This release collects a lot of changes that happened during half year . ... 8 * greatly improved markups support and markups IO . ... 12 * and a lot of work on ` blocks3d ` and ` pair_cores ` with many new features , . ... 39 * new : added ` MarkupIOMixin ` which simplifies defining savable markup classes . ... 68 * new : Alignments , Sequences and Blocks now can have Markups , see the wiki . ... 69 * new : File format 'markup' for storing alignment with arbitrary markups . ...

Еще в разделе: (Показать все результаты (>96836) - kodomo.fbb.msu.ru/ )

This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

Еще в разделе: (Показать все результаты (>1030) - crydee.sai.msu.ru/ )

S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

Еще в разделе: (Показать все результаты (>5630) - monkey.belozersky.msu.ru/ )

• ETS_all_contacts alignment

Электронная библиотека Попечительского совета . ... Jensen K.V. - The Ni-YSZ interface. Structure, composition and electrochemical properties at 1000њC . ... Название: The Ni-YSZ interface. ... Автор: Jensen K.V. Аннотация: . ... Geometrically simple Ni yttria-stabilised zirconia (YSZ) interfaces were examined to gain information on the structural and chemical changes occurring during experiments at 1000њC in an atmosphere of 97% H2/3% H20. ...

Еще в разделе: (Показать все результаты (>10323) - lib.mexmat.ru/ )

• Widom B. - Structure of Interfaces from Uniformity of the Chemical Potential ::
• Kalos M.H., Percus J.K., Rao M. - Structure of a Liquid-Vapor Interface ::
• Peters C.A., Steenbrink J.H. - Mixed Hodge Structures :: Электронная библиотека

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

Еще в разделе: (Показать все результаты (>6984) - mouse.belozersky.msu.ru/ )

• PLANdbAffy: probe-level annotation database for Affymetrix expression
• wLake program homepage
• S : rm_systems

Next: Message buffer Up: 6.4.2 Message Queues Previous: Basic Concepts . The key to fully understanding such complex topics as System V IPC is to become intimately familiar with the various internal data structures that reside within the confines of the kernel itself. Direct access to some of these structures is necessary for even the most primitive operations, while others reside at a much lower level. ... Kernel msg structure . Kernel msqid_ds structure . Kernel ipc_perm structure . ...

Еще в разделе: (Показать все результаты (>278) - itpm.msu.su/ )

• Internal Data Structures
• Kernel semid_ds structure
• Kernel msqid_ds structure

. A program for alignment of structures of DNA-protein complexes . Home . Feedback . Help . About . Input PDB code of the first complex: and chain of the protein (optional): . Input PDB code of the second complex: and chain of the protein (optional): . If you get stuck with program input, try example data and click Align! Example data . 2016

Еще в разделе: (Показать все результаты (>29) - mouse.genebee.msu.ru/ )

• ConClus
• Nhunt: program for nucleic acid sequence similarity search
• StructAlign help

Protein docking algorithm based on structural homology with protein-protein interfaces T. Kirys, A.V. Tuzikov United Institute of Informatics Problems, National Academy of Sciences of Belarus, Surganova, 6, Minsk, tuzikov@newman.bas-net.by An original protein docking algorithm based on structural similarity with experimentally determined protein-protein interfaces is proposed. ... The alignment is performed by dynamic programming on distance matrices of protein and interface. ...

Еще в разделе: (Показать все результаты (>220) - mccmb.belozersky.msu.ru/ )

• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/66.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/134.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/126.pdf

Schedule : Nonlinearity of Media and Structures, Nonlinear Testing . ... Guyer R. (invited) . ... Esipov I. B. Nonlinear Sound Wave Propagation in 2-D Hysteretic Medium . ... Berndt T. P. Simultaneous Probing of the Nonlinear Effect of a Plane Unbonded Interface on Incident Longitudinal and Shear Acoustic Waves as a Function of Amplitude and Pressure . ... R. E. (invited) . ... Korobov A. I. Influence of Internal Structure of Polycrystalline Copper on Its Nonlinear Elastic and Acoustic Properties . ...

Еще в разделе: (Показать все результаты (>183) - acs366.phys.msu.su/ )

• Nonlinearity of Media and Structures, Nonlinear Testing
• Abstract

... Next: DSP board program Up: SPM Installation Previous: Mechanical system of the Contents Index . Figure 1.3: Software structure. The server part of the software is working under Windows NT or XP operating systems. ... Second level - operating system driver, that allow to exchange data with DSP board through input/output ports. ... This structure is a result of qualities this system should satisfy: precise process synchronization, hi-speed data transfer, network support, convenience in usage. ...

Еще в разделе: (Показать все результаты (>78) - www.spm.genebee.msu.ru/ )

• FemtoScan Online program

... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

Еще в разделе: (Показать все результаты (>223) - www.genebee.msu.ru/ )

• GeneBee
• Genebee Predicted Annotation - Advanced
• Screening of pattern or alignment against PROTEIN databank

download:rn-031116 ]] . CompHEP . ... Documentation and help files . ... New scheme of work with initial beams and final composite particles was changed. If you have a private model and want to use them with CompHEP-4.4.0, you have to copy cpart1.mdl file to cpartN.mdl file where N is a number of your model by commands: cd path_to_user_working_directory/model cp cpart1.mdl cpartN.mdl . All new composite particles must be introduce into table by using edit model facilities. ... Downloads . ...

Еще в разделе: (Показать все результаты (>23) - comphep.sinp.msu.ru/ )

• overview [CompHEP]
• download:rn-080423 [CompHEP]

Structure of the Chemistry Department . ANALYTICAL CHEMISTRY DIVISION . LABORATORY OF KINETIC METHODS . ... LABORATORY OF ELECTROCHEMICAL METHODS COLLOID AND INTERFACE CHEMISTRY DIVISION . ... LABORATORY OF EDUCATIONAL METHODS IN CHEMISTRY . ... LABORATORY OF NUCLEIC ACIDS AND NUCLEOTIDES CHEMISTRY OIL CHEMISTRY AND ORGANIC CATALYSIS DIVISION . ... LABORATORY OF PETROLEUM HYDROCARBONS CHEMISTRY ORGANIC CHEMISTRY DIVISION . ... Copyright (C) Chemisty Department of Moscow State University . ...

Еще в разделе: (Показать все результаты (>744) - chem.msu.ru/ )

• Moscow University Chemistry Bulletin Vol. 49, No. 1, P. 23 (2008)
• Moscow University Chemistry Bulletin Vol. 48, No. 3, P. 188 (2007)
• Лекция профессора Ю. Икухара

... real.msf - выравнивание пространственных структур. Отмечено и цветом, и в строке Align, где выравниваются только два белка, где три, а где все четыре. script.src - скрипт для выделения области (не всей данной, потому что разобрать на общей все петли - тяжело) и раскрашивания разных цепей в разные цвета . ... A YGRWE- C YGQWE- D -GFWLE E GASFK- . ... 1 50 A AEIYNKDGNK LDVYGKVKAM HYMSDN.. ... 51 65 A ETQINDQLTG YGRWE C ETQINDQLTG YGQWE D TEDLGGGLKA GFWLE E SGTTDSGLEF GASFK Align ********** ***** . ...

Еще в разделе: (Показать все результаты (>5075) - kodomo.cmm.msu.ru/ )

• tanchiki тАУ Tanchiki
• petri_dish: scale.py annotate
• Changeset 6:721fdbb815c8 тАУ Cyclyc Cell Automata

... On the internal structure of a thin accretion disk . The internal structure of the thin accretion disk in the vicinity of a black hole inside the last stable orbit ( r<3r g ) is considered within the hydrodynamical version of the Grad-Shafranov equation. It is shown that in the vicinity of the sonic surface takes place a sharp diminishing of the disk thickness, so at any way up to the sonic surface the flow is not radial. ...

Еще в разделе: (Показать все результаты (>290) - xray.sai.msu.ru/ )

• Tabbed interface
• Structure of the Galaxy
• Accretion Mechanizsm of the Formation of the Large Structure

RnaViz . RnaViz is a user-friendly, portable, windows-type program for producing publication-quality secondary structure drawings of RNA molecules. Drawings can be created starting from DCSE alignment files if they incorporate structure information or from mfold ct files. The layout of a structure can be changed easily. ... Home Site: . http://rrna.uia.ac.be/rnaviz/ . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

Еще в разделе: (Показать все результаты (>2168) - www.sai.msu.su/ )

• SAL- Computer Graphics, Images Signals - Misc - Boost Graph Library
• SAL- Programming - Tools & Utilities - C Interfaces and Implementations
• SAL- Other Scientific Fields - Chemistry, Biology Related - DCSE

Network Working Group S. Sluizer Request for Comments: 786 J. Postel ISI July 1981 MAIL TRANSFER PROTOCOL: ISI TOPS20 MTP-NIMAIL INTERFACE INTRODUCTION This document defines the ISI TOPS20s interface between the Mail Transfer Protocol (MTP) and the Network Independent Mail Protocol (NIMAIL) in terms of the files which implement it. ... DISCUSSION The NIMAIL and MTP will each perform a transformation of the address information to create the appropriate input for the other system. ...

Еще в разделе: (Показать все результаты (>16003) - mirror.msu.net/ )

• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc786.txt.pdf
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc785.txt
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc785.txt.pdf

Annotation of the graduate work of 6th-year student A.V. Buzmakov Tomography of biological objects with submillimeter resolution using 0.7-2.2 е wavelengths. The progress in such areas as nanotechnology, polymeric technology, microbiology and medical diagnostics, is associated with development of nondestructive methods which allow to recognize objects internal structure, with higher resolution. ... In many cases scientists require 3-D model of density distribution (or X-ray absorption) of object. ...

Еще в разделе: (Показать все результаты (>109) - ofvp.phys.msu.ru/ )

• http://ofvp.phys.msu.ru/en/science_education/diploma/annot/2013/Safronov_Fedotov_en.pdf
• http://ofvp.phys.msu.ru/en/science_education/diploma/annot/2006/Voronov_Ponomarev_en.pdf

... Class . ... Provides an abstraction for multidimensional array access, some concrete implementations, and ways to view a MultiArray as if it had a different structure. ... This interface defines the services required by MultiArrayProxy to manipulate indexes and the dimensions of a MultiArray. ... In the following, we use the unadorned term "array" to mean the Java language construct, and the term "multidimensional array" for the mathematical abstraction modeled by the MultiArray class in this...

Еще в разделе: (Показать все результаты (>166) - angel.cs.msu.su/ )

• NetCDF User's Guide for C
• : API Help
• API Help

... They in fact form surfaces that can be treated as interfaces between polar aqueous solutions and non-polar environment of phospholipidic side chains. ... That's why our idea was to study the behaviour of amino acid residues, as monomer units of proteins, in an interfacial system. Objective By means of molecular dynamics simulations we intended to study the properties of amino acid residues in a system containing liquid-liquid interface between water and hexane, which we took as a non-polar phase. ...

Еще в разделе: (Показать все результаты (>295) - polly.phys.msu.ru/ )

• SHORT ANNOTATION AND MAIN RESULT
• Polymer Macromolecules at Surfaces, Polymer Interfaces (theory + computer