... SDPfox - the software package for the prediction of functional specificity groups and amino acid residues that determine the specificity using MPA. ... Amino acid residues that determine differences in protein functional specificity and account for correct recognition of interaction partners, are usually thought to correspond to those positions of a protein multiple alignment, where the distribution of amino acids is closely associated with grouping of proteins by specificity. ...

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• SDPpred

... Criteria of branch quality . As it was repeatedly told , phylogenetic trees consist from branches. ... I. e., those positions, which can separate sequences of the branch from other sequences in the alignment. ... Measure of branch separation . ... Here and further: A - branch of the tree, i , j - sequences of alignment . ... That's why number of conserved positions in some branch should be considered in complex with the distribution of conserved positions in the whole alignment. ...

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• About this project
• SDP home page
• SDPpred

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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... J.K. Krylov . In the monography by R. Koehler [1] there was described a very interesting effect of the words' average length oscillation as a function of their frequency of use (according to the data from a representative frequency dictionary). ... In this context, further the Koehler's effect will be definied as polymodal character of the dependence of the conditioned average in cases of two-dimencional distributions of any linguistic nature. ...

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• MSU-LGCLL:: Krylov J.K.- Three Laws of Fiction Prosaic Texts Organization

... 172 ] Briefly, the count rate at the detector from a source at a redshift z is . ... Figure 55 shows the ``Green functions'' for the double compact binary merging rate   evolution assuming no collapse anisotropy. ... Another way that diverse peculiarities in the - distribution induced by the sources evolution could arise is connected with a possible non-monotonic character of the star formation rate in galaxies. ... 22 ] Figure  56 shows two-dimensional cuts through the parameter space. ...

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• Initial Distributions of Binary Parameters
• Old neutron star distribution in the Galaxy
• Dependence on the Scenario Parameters and Initial Distributions

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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Network Working Group Request for Comments: 4794 Obsoletes: 1264 Category: Informational B. Fenner AT&T Labs - Research December 2006 RFC 1264 Is Obsolete Status of This Memo This memo provides information for the Internet community. ... Copyright Notice Copyright (C) The IETF Trust (2006). ... It prescribed rules to protect the Internet against new routing protocols that may have various undesirable properties. ... Fenner Informational [Page 1] RFC 4794 RFC 1264 Is Obsolete December 2006 1. ...

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• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc4794.txt
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc1852.txt
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc1852.txt.pdf

by Margarita Dzhalalova It is known that the pressure difference values for a round parachute are constant over total canopy, then for a square parachute the values of pressure difference are non-uniform along radial ribbons differing even from each other and depending mainly on certain sets of line lengths, and therefore square parachutes attain different shapes from each other ( Fig.1 - photo of var.1 and var.2). ... Distribution of pressure coefficient along radial ribbons of square parachute. ...

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• Air-Permeability Influence on Pressure Distribution Character
• Scientific Achievements

COMPARISON OF CLUSTERING ALGORITHMS FOR SPEAKER IDENTIFICATION Nikolay Lubimov, Evgeny Mikheev, Alexey Lukin Moscow Lomonosov State University, Moscow, Russia In this paper we consider the problem of text-independent speaker identification that refers to acoustic recognition research. ... We have performed the comparison of different clustering methods for speaker identification: the standard K-means clustering, K-means++, Linde-Buzo-Gray, Fuzzy C-means, and Gustafson-Kessel algorithms. ...

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• http://imaging.cs.msu.ru/pub/2011.Graphicon.Zipa_Ignatenko.MetallicCoating.en.pdf
• http://imaging.cs.msu.ru/pub/2011.Graphicon.Samsonov_Ignatenko.CameraCalibration.en.pdf

Bioinf ormatic analysis of diverse protein superf amilies to design improved enzymes Dmitry Suplatov , Nikolay Panin, Tatyana Shcherbakova, Ilyas Khaliullin, Vytas Svedas Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and F aculty of Bioengineering and Bioinformatics ... D. Suplatov, E. Kirilin, V. Takhaveev, V. Svedas (2014) Zebra: web-server for bioinformatic analysis of diverse protein families, J.Biomol.Struct.Dyn., ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/156.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/244.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/149.pdf

... In this case both the medium and the electric field depend on two space coordinates only. ... The classical modeling presentation is in apparent resistivity which reflects an electric field distribution on the earth's surface. ... An expression can be derived for the potential value in point M ([pic]): [pic], (4) where [pic] is the potential of the primary electric field, [pic] is the potential of the secondary electric field, defined by the surface charge distribution. ... pic] |[pic] | ...

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• Anis. Page2
• TES. Processing

Following are instructions to build and install the programs in this distribution. Make sure that you have all necessary tools for building executables. ... The automatic build process expects a configuration file called Config.local . ... The configuration file specifies the directory in which to install the binaries, as well as control over the generation of debugging code and reference clock support. ... Cleans out object files, programs and temporary files. make distclean . ...

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• The Network Time Protocol (NTP) Distribution
• SAL- Other Scientific Fields - Chemistry, Biology Related - Evalign
• Zen: NewExtentsBasedRanking

Back to homepage >> . ... key words: [ melt inclusions, experiment, diffusion, boundary layer effect ] . ... In order to distinguish an influence of the boundary effects on the composition of melt inclusions, the experiment on growth of alkali feldspar (Fsp) crystal in the haplogranitic system (Q-Ab-Or) was performed. ... Estimation of an influence of the boundary effect on melt inclusion composition . ... The larger inclusion the weaker its influence on the boundary layer. ...

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• The influence of boundary layer effects on the melt inclusions compositions.

... Columns represented with one sequence or pure gap columns are not considered. Calculate weighted average of number of connected components in columns. Weight of column = l / sum(l) (l = number of sequnces representing column) . ... 2 from allpy import dna . ... 8 count = {} . ... 14 return "+" . ... 25 def find_runs ( markup ): . ... 33 plus_positions = [] . ... 46 raise Exception ( "No blocks in alignment" ) . ... 58 return blocks . ... 66 for column in alignment . ... 68 markup = alignment . ...

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• allpy: bd3d695f9906 lib/project.py
• allpy: ee2c10aa74b8 test/usecase1.py
• allpy: ee2c10aa74b8

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... The number of randomly coinciding change-points (the noise level) can be easily estimated using the total numbers of change-points in each EEG channel, and thus the estimate of the number of systematically coinciding change-points can be cleared from the randomly coinciding change-points, both "true" and "false". ... This number, however, vary with the number of change-points in each channel. ...

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• Change-point detection algorithm performance with real EEG
• Change-points in EEG components with different pattern

Laboratories \ Laboratory for Ecology of Lower Vertebrates \ Goals and Tasks . Goals and Tasks . ... Ecology of organisms and communities . ... Geographic variation of morphological features, species structure, distribution, peculiarities of growth, feeding, spawning and population structure of Siberian sturgeon were studied within its natural range. ... Long-term dynamics of teratogenesis in the young acipenserids, bred in the Volga fish-hatcheries, was analyzed. ...

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• Russian Journal of Biological Invasions: 2011, issue ? 4
• Laboratories: Laboratory for Soil Zoology and General Entomology: Goals and
• Российский Журнал Биологических Инвазий: Оглавления номеров

... The factors that play the key role in complex formation are as follows: the rate of protein diffusion to the docking site; long-range electrostatic interactions between protein surfaces, geometric and chemical complementarity of binding areas; molecular mobility at the protein­protein interphase, hydrogen bonds, Van der Waals interactions, hydrophobic interactions, and salt bridges. ... Three-dimensional protein molecules are constructed on the basis of data extracted from the Protein Data Bank. ...

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• МОДЕЛИРОВАНИЕ ВЗАИМОДЕЙСТВИЯ МАГНИТНОГО ПОЛЯ С ОБЪЕМНЫМИ ВЯЗАНЫМИ СТРУКТУРАМИ

... As a point of departure consider Russian data, where nouns denoting male individuals are always masculine (1a), while nouns denoting female individuals are always feminine (1b). (1) a. xorСs-ij good-MASC.N. `good father' SG ot'Иc father.N. SG (MASC b. xorСs-aja ) good-FEM.N.SG `good mother' mАt' mother.N. SG (FEM ) Thus, we can predict grammatical gender of a noun (`masculine' or ` feminine') on the basis of its semantics (`male' or `female') (Corbett 1991). ... Halkomelem lacks n-GENDER. ...

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• http://www.philol.msu.ru/~otipl/new/fdsl/abstracts/romanova.pdf
• http://www.philol.msu.ru/~otipl/new/mscl/2008/abstracts/mikhina.pdf
• http://www.philol.msu.ru/~otipl/SpeechGroup/publications/krivnova-2001-2004/krivnova_bogdanov_specom-2004.doc

... von Collani E., Drager K. - Binomial Distribution Handbook for Scientists and Engineers . ... Название: Binomial Distribution Handbook for Scientists and Engineers . Авторы: von Collani E., Drager K. Аннотация: . Binomial Distribution Handbook for Scientists and Engineers is a new reference book that deals with estimating and testing a proportion or the probability of an event. ... Distribution, binomial 19 21 . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Hotelling H. - The Distribution of Correlation Ratios Calculated from Random
• Vojta P.A. - Diophantine Approximations and Value Distribution Theory ::
• Поиск книг, содержащих General position :: Электронная библиотека

... The first position of this menu starts the process of Monte Carlo integration. It consists of Itmx runs with subsequent adaptation of the Monte Carlo weight function to the integrand. ... If the required precision of calculation is not reached the user may call the Start integration menu function once more to increase the Monte Carlo statistic. ... The user must take into account that any new call of the Start integration menu function will rewrite this file. ...

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• CTEQ4m distribution functions
• Main facilities
• CalcHEP Licence