. A program for alignment of structures of DNA-protein complexes . Home . Feedback . Help . About . StructAlign v1.0 is developed and maintained by a team from A.N. Belozersky Institute of Physico-Chemical Biology MSU and Faculty of Bioengineering and Bioinformatics MSU. You can read more in: Biochemistry (Moscow), 2015, Vol. 80, No. 11, pp. 1465-1468 (DOI: 10.1134/S0006297915110073) .

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• Align tool for DNA-protein complexes

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Method of Laser Interference Microscopy for investigation of erythrocytes Yusipovich A.I., Bryzgalova N. Yu., ... The LIM method allows to study the native contrastless biological objects without fluorescent probes. It also makes possible to estimate quantitatively change in the optical density, thereby providing not only qualitative but quantitative data at cell different states. ... The finding results allow to use LIM as appropriate method for investigation of erythrocytes condition. ...

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• MSM 2007

S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• NPIDB project. Introduction
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... Improvement of Java type compiler using in language independent remote process calls in KBase project. 09/2011 ­ present: Moscow State University, Dept. of Bioengineering and Bioinformatics (Russia) Scientific Research Java developer and lecturer Enhanced the CAMPS web resource (http://webclu.bio.wzw.tum.de/CAMPS2.0/) that enables multiple classification of transmembrane proteins. ... Developed web based UI for visualization of a graph of transmembrane protein families. ... Sutormin RA, Mironov AA. ...

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... Vestnik Moskovskogo Universiteta. Seriya 1. Matematika. Mekhanika. ...

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... wLake 1.7 . wLake is a tool which allows to identify clusters of a structural water molecules in given superimposed 3D structures. Put your coordinates in PDB format into the text area. Select a distance threshold. Two water molecules from different structures will be concidered as located in the same space point if the distance between centers of oxygen atoms is less than this threshold. ... EACH STRUCTURE INCLUDING ITS WATER MOLECULES MUST BE PRESENTED AS SEPARATE MODEL: EXAMPLE. ...

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• Geometrical core

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О лаборатории . ... Лаборатория теоретической биофизики . ... Here the guide to use RESP technique based on calculations from Firefly or GAMESS-US is presented. ... Note, that RESP algorythm will fit potential in the set of points which are selected according to $PDC group in the input-file. ... Нет комментариев " Using RESP with GAMESS-US and Firefly (PC-GAMESS) " . ... Using Firefly/GAMESS-US efficiently . ... Scannin? in Using Firefly/GAMESS-US efficiently? 2012 ERG Research Group . ...

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e-mail: theory@socio.msu.ru) , , policy, state terrorism , International system, instrument of foreign : , - . Today there are three components of international system: developed democratic countries' world, transit countries' group and the world of abortive countries. ... The USA built a new structure of the world policy suitable for them and as the main instrument of foreign policy the USA use state terrorism. ...

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... Gamma-activation analysis is being used to study these processes at SINP MSU. A software package for processing experimental data from HPGe detector has been developed. The program uses Monte-Carlo method to simulate main stages of the experiment and presents results on a graphical interface. (,n) , . ... 5-6 70 . ... HPGe). ... GEANT4 . GEANT4 HPGe , . ...

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... List of complexes . ... NPIDB, Nucleic acid ? Protein Interaction DataBase provides an access to structured and organized information about all available structures of DNA ? ... Since 2003, the database is available online. ... NPIDB: nucleic acid?protein interaction database . ... An updated version of NPIDB includes new classifications of DNA-protein complexes and their families . ... Sergey Vasilyev (the main developer of the first version of the database) . ... 03-04-48476 (2003 2005) . ...

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... Географии мирового хозяйства . ... География" . ... Zilitinkevich, S.S., 1972: On the determination of the height of the Ekman boundary layer. Boundary-Layer Meteorol., 3, 141-145 (160 citations) . Zilitinkevich, S.S., 1975: Comments on "A model of the dynamics of the inversion above a convective boundary layer". ... Boundary-Layer Meteorol., 46, 367-387 (54 citations) . ... Boundary-Layer Meteorol., 81, 325-351 (52 citations) . ... Boundary-Layer Meteorol. 105, 389-409 (36 citations) . ...

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• Вестник Московского университета. Серия 5. География
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Skip to main content . ... Main courses . Extra courses . ... Course . ... 119992 Moscow, GSP-1, Leninskie Gory, MSU, mechanics and mathematics department, OPU, Room 13-14 . ...

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... Applications of Molecular Mechanics to Metal Complexes" . ... Molecular mechanics study of the mixed-ligand lanthanide complexes using Gillespie-Kepert model . ... Within MM-GK, the same parameters are applicable to complexes of different coordination numbers/polyhedra. ... Gillespie-Kepert model . ... Using derived computational parameters, we calculated the geometry of 39 lanthanide ion nonaaqua complexes, 6 octaaqua complexes and 18 beta- diketonate and aqua-beta-diketonate complexes. ...

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