... An approach to the hybrid quantum mechanical and molecular mechanical (QM/MM) theory based on the effective fragment potential (EFP) technique (M. Gordon and co-authors) for modeling properties and reactivity of large molecular systems of biochemical significance is being developed. Currently we are preparing a novel version of the computer program based on the most recent variant of the PC GAMESS quantum chemistry package (A. A. Granovsky) and the TINKER molecular modeling package (J. Ponder). ...

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• Laboratory of Chemical Cybernetics
• History

... About lab . ... Online Journal "Computer graphics and multimedia" (in russian) . ... We found that automatic models are significantly worse at predicting attention than even single-observer eye tracking. We propose a semiautomatic approach that requires eye tracking of only one observer and is based on time consistency of the observer?s attention. ... Gitman Y, Erofeev M, Vatolin D, Bolshakov A, Fedorov A. Semiautomatic Visual-Attention Modeling and Its Application to Video Compression . ...

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• Semiautomatic Visual-Attention Modeling | Лаборатория компьютерной графики и
• Semiautomatic Visual-Attention Modeling and Its Application to Video
• Displacement and Normal Map Creation For Pairs of Arbitrary Polygonal Models

Network Working Group M. Crispin Request for Comments: 1733 University of Washington Category: Informational December 1994 DISTRIBUTED ELECTRONIC MAIL MODELS IN IMAP4 Status of this Memo This memo provides information for the Internet community. ... Distributed Electronic Mail Models There are three fundamental models of client/server email: offline, online, and disconnected use. ... In this model, a client application manipulates mailbox data on a server machine. ...

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• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc1733.txt.pdf
• http://mirror.msu.net/pub/rfc-editor/internet-drafts/draft-meng-savi-yang-01.txt
• http://mirror.msu.net/pub/rfc-editor/internet-drafts/draft-liu-netmod-yang-schedule-00.txt

... Structure Z-scores, positive is better than average: 1st generation packing quality : -3.884 (poor) Ramachandran plot appearance : -2.523 chi-1/chi-2 rotamer normality : -4.230 (bad) Backbone conformation : -4.982 (bad) RMS Z-scores, should be close to 1.0: Bond lengths : 0.946 Bond angles : 1.326 Omega angle restraints : 0.858 Side chain planarity : 0.559 (tight) Improper dihedral distribution : 0.999 Inside/Outside distribution : 1.206 (unusual) 2 структура: . ...

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• Task 6, Pfam
• Гомологичное моделирование
• Второй семестр

... Paradigm shifts by Kuhn: successive change of one model by another, rather than integration of different paradigms Progress of science: from single- to multi-model approach Some examples from natural science... · theory of light: from vibration of ether to wave-particle duality · laws of motion: from Newton's dynamics to SchrЖdinger 's and Heisenberg's formalism In social and environmental sciences appreciation of the multi-model ...

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... Model implementation of buffered mode . Up: Buffer allocation and usage Next: Nonblocking communication Previous: Buffer allocation and usage . ... The entries are stored in successive locations in the buffer. ... A buffered send call results in the execution of the following code. ... Find the next contiguous empty space of n bytes in buffer (space following queue tail, or space at start of buffer if queue tail is too close to end of buffer). ... Центры . ...

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• Models of Execution | PARALLEL.RU - Информационно-аналитический центр по
• Basic Statements | PARALLEL.RU - Информационно-аналитический центр по
• Formalizing the Loosely Synchronous Model | PARALLEL.RU -

... The distribution license of software should not be worse than the distribution license of training materials. ... Training of specialists in software development is impossible without studying software development; moreover, it should be based on real software rather than on examples . ... Цена ошибки и требования к инструменту в образовании с общественной точки зрения крайне высоки, поэтому необходим открытый общественный механизм, управляющий разработкой ПО. ...

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• Index of /static/AltDocs_informatika2/Book2/ch_09_model/01_model
• Meetings/Murray - UNИX
• Index of /static/AltDocs_informatika2/Book2/ch_09_model/01_model/02_life

Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Другие названия журнала: J Mol Model , J Molecular Modeling . ... в журнале Journal of Molecular Modeling , издательство Springer Verlag (Germany) , том 20, ? ... Berhanu Workalemahu Mikre , Masunov Artem E. в журнале Journal of Molecular Modeling , издательство Springer Verlag (Germany) , том 18, ? ...

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• Mathematical modelling of natural phenomena - журнал | ИСТИНА -
• Gusev A.A. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• Computational Mathematics and Modeling - журнал | ИСТИНА - Интеллектуальная

... O.S.Razumovsky . ... There exist two interconnected problems in philosophy: physics and cosmology. We have essence of time, and modelling of time. ... As far as the essence of time and time modelling in physics and cosmology is concerned, we do not consider models of physical and cosmological time to be isolated from time essence. ... Here it is supposed that the existence of a “clock” causes physiological perception of time and determines the theoretical notion – an abstract time model. ...

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• Laboratory-chair of modelling the natural references of time

In our model for RNA secondary structure formation we assume that each of the candidate helices (see definition in the main text) may exist in two states. A helix can be completely zipped, or it can be completely decayed. ... The following schema is used to estimate the effective transition constants between zipped and decayed states: . ... To determine the kinetic constants, we use the transition state theory, which is often used in chemical kinetics (Figure 2). ... Transition . ...

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Laboratories \ Group for Bioinformatics and Modeling Biological Process \ www.sevin.ru Web Portal Functional Possibilities . ... www.sevin.ru Web Portal Functional Possibilities . ... Representation of information (standard technologies of presentation in WEB, plus technologies of data visualization); . ... Portal "Genetic and biological collections of the RF". ... WEB-portal and database of coordinating center on access to genetic and biological collections of the Russian Federation. ...

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• Laboratories: Group for Bioinformatics and Modeling Biological Process: Results
• Laboratories: Laboratory for Ecology of Lower Vertebrates: Goals and Tasks
• Russian Journal of Biological Invasions: 2012, issue ? 3

Diploma thesis abstract model describing the recently observed femtosecond oscillations in bacterial photoreaction centers at primary photosynthesis acts is presented. ... Good agree ment between model yield and experimental 150 fe mtosecond oscillations achieved. A set of numerical experiments for different regimes of electron transport was realized. Diploma also contains a comparison between different model approaches using to describe electron transport. ...

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• http://ofvp.phys.msu.ru/en/science_education/diploma/annot/2011/Sosorev_Paraschuk_en.pdf
• http://ofvp.phys.msu.ru/en/science_education/diploma/annot/2008/Khakhalov_Zheltikov_en.pdf
• http://ofvp.phys.msu.ru/en/science_education/diploma/annot/2011/Osipova_Emelyanov_en.pdf

Fortran-DVM . ... Language description . ... 2.2 Syntax of FDVM directives . ... 4.2 Distribution of dynamic arrays . ... 6 Remote data specification . ... 6.2 SHADOW type references . ... 6.2.2 Synchronous specification of independent references of SHADOW type for single loop . ... 6.2.5 Asynchronous specification of independent references of SHADOW type . ... 6.3.3 Asynchronous specification of REMOTE type references . ... 6.4.2 Asynchronous specification of REDUCTION type references . ...

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• C-DVM language description
• Lib-DVM. Preliminary design

Moscow State University Belozersky Institute of Physico-Chemical Biology . Department of Electron Microscopy is a sub-division of A.N. Belozersky Institute of Physico-Chemical Biology . ... We are interested of how eukaryotic cell is organized, formed and functioned. Since A.N. Belozersky Institute of Physico-Chemical Biology is one of the scientific departments of Moscow State University ? ... Understanding the metaphase chromosome architecture remains a basic challenge in cell biology. ...

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RNA Tertiary Structure Modelling . ... Two steps to fold coarse-grained model of RNA tertiary structure . ... fill in RNA secondary structure form with CT format (also with pseudoknots); . ... push "Finish Step #1" button to obtain secondary and intermediate* structures. * intermediate structure is the structure with minimum of "free energy" contains formed helixes and stacking, but without tertiary interactions . RNA secondary structure form . ... some useful RNA secondary structure databases: . ...

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• TmrnaEnglish - Projects - TWiki

... A one-dimensional model of shallow reservoir thermodynamics either describing physical processes in underlying soil layer is constructed. The model simulates seasonal dynamics of lake (including ice and snow layer formation) and year to year variability. A number of numerical experiments is performed; model and natural data are compared. ... S = S0 (sin cos + cos cos cos ). ... 2002, C. 83­87. ... Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee. ...

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... Different equations of state tables can be used, including SAHA-S equation of state. ... 1) separate input fields for X and Z are used, each line contains only T and rho; example: 2.17e6 0.18 . 2) each line contains T, rho, X and Z; separate input fields for X and Z are ignored; example: 2.17e6 0.18 0.74 0.018 . 3) each line contains T, rho, X, Z(CNO), Z(Ne), Z(FeSi); separate input fields for X and Z are ignored; example: 2.17e6 0.18 0.74 0.010 0.002 0.006 . ...

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• Solar modeling input physics (thermodynamics, opacity, nuclear reactions)
• Index of /ftproot/pub/local/science/models
• Index of /ftproot/pub/local/science/models/smc

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• Previous and Proposed
• The IMG (Image) Element

... My research topic is application of the theory of dynamical systems to models of excitable media. ... One of the remarkable examples of an excitable medium is heart tissue. ... We have observed dynamics of phase singularities using some of the techniques for PS detection on the base of just one framework three-variable Fenton-Karma model with different parameters sets to reproduce various mechanisms of spiral wave breakup which in principle can occur in cardiac tissue. ...

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• Scientific
• Group of the Symmetry Research and Modeling of (Bio)Polymers - Chair of Polymer
• Publication list, Olga Shamardina

... Contacts with DNA . ... List of conservative Hbonds of ETS domains with DNA backbone . Bond ID . ... All containing DNA, except W and X (18 of 20) . ETS-1, GABP alpha PU.1 from mouse; Elk-1, SAP-1 PDEF from human . ... All containing DNA . All proteins, for which there are structures, containing DNA . ... All containing DNA, except I (19 of 20) . ... List of conserved Hbonds of ETS domains with the DNA major groove . ... ETS-1, GABP alpha PU.1 from mouse; ETS-1, SAP-1 PDEF from human . ...

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• HTH3_numeration_assumed
• ETS numeration assumed
• 1FJL biounits