... The LanHEP input file is the sequence of statements, each starts with a special identifier (such as parameter, lterm etc) and ends with the full-stop ' . ... This section is aimed to clarify the syntax of LanHEP input files, i.e. the structure of the statements. ... Let us consider the LanHEP input files for the Standard Model with both the t'Hooft-Feynman and unitary gauges. ... LanHEP allows the user to define several keys , and use these keys to branch among several variants of the model. ...

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• [Comphep-common] 2HDM process production
• Definition of a model in CompHEP
• [Comphep-common] error with simbolic calculation on new model

... Structural modeling of PPI (protein docking) can be roughly divided into: (i) free docking, where sampling of the binding modes is performed regardless of the possible existence of similar experimentally determined structures, and (ii) template-based or comparative docking, where such similar complexes (templates) determine docking predictions. ... 2006) A new measure for functional similarity of gene products based on Gene Ontology, BMC Bioinformatics, 7:302. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/188.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/179.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/6.pdf

FCNC Penguin Processes in Models Beyond the SM . ... The Standard Model (The SM) Simple extensions of the SM Supersymmetric models Extra dimensional models Strongly coupled and effecBve field theories The Standard Model : Standard Model of ParBcle Physics Simple extensions of the SM: Several models based on the SM that include one or more addiBonal parBcles, like a 4th generaBon, a second Higgs doublet or addiBonal colored scalars Supersymmetric Models : Various supersymmetric ...

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• http://qfthep.sinp.msu.ru/talks/2010_09_14_Perfilov_FCNC1.pdf
• http://qfthep.sinp.msu.ru/talks2013/shleenkov.pdf
• http://qfthep.sinp.msu.ru/talks2013/QFTP-2013_Bodnya__Derkach__Kovalenko__Puchkov__Feofilov1.pdf

... Glossary of the laboratory-chair . ... Institute Laboratory-Chairs . ... Laboratory-chair of modelling the natural references of time . ... All natural systems are considered as hierarchic systems. ... These flows are called generating flows. ... The union of all sets of elements of a system's generating flows is considered as its space or medium. ... The formation, or the course of time, in systems is considered as changing the amount of substance of some generating flows in these systems. ...

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• Russian Interdisciplinary Temporology Seminar
• O.S.Razumovsky. Models of Time in Physics and Cosmology

RNA Tertiary Structure Modelling . ... Two steps to fold coarse-grained model of RNA tertiary structure . ... fill in RNA secondary structure form with CT format (also with pseudoknots); . ... push "Finish Step #1" button to obtain secondary and intermediate* structures. * intermediate structure is the structure with minimum of "free energy" contains formed helixes and stacking, but without tertiary interactions . RNA secondary structure form . ... some useful RNA secondary structure databases: . ...

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• TmrnaEnglish - Projects - TWiki

... To acquaint the reader with nonlinear dynamic systems; . ... The geology investigates of the Earth as a dynamic system. ... The analysis of behavior of systems with nonlinear interplay during time is a subject of this E-textbook. ... Key words: geological processes, dynamic system, nonlinear processes, chaotic dynamics, deterministic chaos, fractals. ... Chapter 1. ... For more information concerning the E-textbook "Dynamic processes in geology: Introduction to nonlinear systems" refer to the...

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• Professional experience of V.Zakharov

In our model for RNA secondary structure formation we assume that each of the candidate helices (see definition in the main text) may exist in two states. A helix can be completely zipped, or it can be completely decayed. ... The following schema is used to estimate the effective transition constants between zipped and decayed states: . ... To determine the kinetic constants, we use the transition state theory, which is often used in chemical kinetics (Figure 2). ... Transition . ...

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О лаборатории . ... Лаборатория теоретической биофизики . Published in Февраль 8th, 2016 . Posted by comcon1 in Без рубрики . ... ERG group members work with different types of molecules and consequently added new atomtypes into classical OPLS-AA distributed with GROMACS. Now the ERG patch of OPLS-AA force field is published at bitbucket as a repository. continue reading.. ... Published in Май 19th, 2015 . ... comcon1 in All-atom automatic OPLS-AA topology? . ... 2014 ERG Research Group . ...

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• Lipid membrane MD modeling with GROMACS ERG Research Group: Лаборатория
• gromacs ERG Research Group: Лаборатория теоретической биофизики
• membrane ERG Research Group: Лаборатория теоретической биофизики

. QM/MM approach is applied to modelling of GTP hydrolysis reaction mechanism. We use X-ray structure as initial atom coordinates for QM/MM calculations. We consider 2 systems: free EF-Tu and complex with ribosome.

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• History
• Laboratory of Chemical Cybernetics

... In such situations it is natural to consider models which allow solutions in which a field variable or its space or time derivative may experience a jump discontinuity. Solutions with jumps are natural for hyperbolic equations, and their existence is evident. ... In this case, the existence of a solution with jumps is not evident. аа Let us restrict attention to models describing the "diffusive" spreading of a film, which starts initially with a jump in its surface elevation. ...

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• Abstract (Invited)

... Paradigm shifts by Kuhn: successive change of one model by another, rather than integration of different paradigms Progress of science: from single- to multi-model approach Some examples from natural science... · theory of light: from vibration of ether to wave-particle duality · laws of motion: from Newton's dynamics to SchrЖdinger 's and Heisenberg's formalism In social and environmental sciences appreciation of the multi-model ...

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• http://oc.cs.msu.ru/eroven/page.htm
• CURRICULUM VITAE

... Home > Department of Computational Technologies and Modeling . ... Functional analysis and computational mathematics by Prof. Bogatyrev, 68 lecture hours and 32 seminar hours, 5th and 6th semesters. ... Computational technologies and mathematical modeling of biological systems by Prof. Bocharov, 64 lecture hours, 6th semester. ... Computational information technologies of climate modeling by Prof. Lykosov, 32 lecture hours, 8th semester. ... Computational technologies and modeling. ... Modeling. ...

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• Department of Computational Technologies and Modeling | CMC MSU
• Department of Systems Analysis | CMC MSU
• Laboratory of Inverse Problems | CMC MSU

KEYWORDS: language evolution, mathematical modelling, branching processes . ... 2 Basic assumptions. ... Dying out, giving birth, and preserving of sign's meanings. ... Modelling of language evolution should be based on some assumptions concerning its micro-level, i.e. level of its micro-units' development. ... That is why it has become the starting point in the building of the mathematical model for the development in time and synchronic correlation of the whole system of a sign's features. ...

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• Melnikov G.P.- Systemology and Linguistic Aspects of Cybernetics
• MSU-LGCLL:: Curriculum Vitae of Anatoliy Anatolyevich Polikarpov
• МГУ-ЛОКЛЛ:: Библиография основных работ А.А. Поликарпова за последние годы

Официальный сайт кафедры Математической теории интеллектуальных систем и . ... Наука . ... A.B. Zizchenko, A.S. Agjiev, S.P. Konovalov, M.V. Kulagin, P.Pogorelko, V.A. Serebriakov, S.V. Znamenskii The Russian web portal of mathematical resources math-net.ru . ... D.N. Babin To the automata models in the information processing . ... A.V. Chechkin Applied intelligent systems . ... A.V. Sokolov, E.A. Aksenova, A.A. Lazutina, A.V. Tarasyuk Mathematical models of dynamic data structure . ...

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• Intelligent Systems :: Teaching
• Intelligent Systems :: Magazine :: Web archive :: Volume 13, issue 1-4, 2009
• Intelligent Systems :: Magazine :: Web archive :: Volume 15, issue 1-4, 2011

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... It is necessary to note that a change-point detection method which we applied to a real EEG signal was developed on the basis of the piecewise stationarity model of the signal. ... The data presented in this Chapter demonstrate that the effective detection of the change-points opens the way for a number of new methods of the analysis of complex signals such as the EEG. ...

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• EEG feature extraction
• Parametric segmentation of the EEG
• Conclusion

... For those who is interested in thermodynamic modeling . Yuri Shvarov . This page is aimed mainly at the users of the software package HCh for thermodynamic (equilibrium) modeling of (geo)chemical systems and processes. However, some files presented here may also be of some interest to those who do not use HCh. ... HCh for DOS . ... User's guide for the Unitherm program intended for maintaining thermodynamic databases and calculation of thermodynamic properties of substances . ...

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• Faculty of geology Moscow State Lomonosov University
• Кафедра Петрологии МГУ
• Software for resistivity and induced polarization

... Гранты . ... 2004 . ... i) Physical model of molecular machines based on the Kolmogorov-Fokker-Planck equations. (ii) Theoretical model of the 2D and 3D Brownian motion for simulation of protein dynamics in water. (iii) Stochastic, probability, and spectrum characteristics of the Brownian motion obtained using numerical methods and computer simulation. (iv) Raman spectroscopy data on enzyme (chymotrypsin) and enzyme-substrate complex and their interpretation using numerical and analytical results. ...

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• Publication
• Laboratory of solid-state lasers and coherent spectroscopy
• Laboratory of ultrafast processes in biology

... Grants . ... 2004 . ... i) Physical model of molecular machines based on the Kolmogorov-Fokker-Planck equations. (ii) Theoretical model of the 2D and 3D Brownian motion for simulation of protein dynamics in water. (iii) Stochastic, probability, and spectrum characteristics of the Brownian motion obtained using numerical methods and computer simulation. (iv) Raman spectroscopy data on enzyme (chymotrypsin) and enzyme-substrate complex and their interpretation using numerical and analytical results. ...

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• Грант подробно
• "Computers and measurements" practical course laboratory

. Parent Directory . 400-0029.dat . helios.dat . hpcse.1 . hpcse.inf . hpcse.inf.old . input.lst . models.grf . models1.grf . neutrinos . process.cmd . summary.dat . summary.old . summary.old1

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• Long description of example illustrating the collapsing borders model
• Index of /ftproot/pub/local/science/models
• Solar modeling input physics (thermodynamics, opacity, nuclear reactions)

Buffer phenomenon in mathematical mo dels of natural sciences Mishchenko E. F. Steklov Institute of Mathematics, Russian Academy of Science e-mail: mishch@mi.ras.ru Kolesov A. Yu. Demidov Yaroslavl State University e-mail: kolesov@uniyar.ac.ru Rozov N. Kh. ... 3] Kolesov A.Yu., Mishchenko E.F., and Rozov N.Kh., ... Math., ... 6] Kolesov A.Yu., and Rozov N.Kh., ... The Buffer Phenomenon in Combustion Theory", Dokl. ... 13] Mishchenko E.F., Sadovnichii V.A., Kolesov A.Yu., and Rozov N.Kh., ...

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• Preliminary List of Plenary Talks International Conference Differential
• Ожидаемые пленарные доклады Международная конференция Дифференциальные
• Program Международная конференция Дифференциальные уравнения и топология ,