... Many protein families contain homologous proteins that have a common biological function but different specificity. Given a multiple sequence alignment of a family divided into specificity groups, SDPpred predicts a set of alignment positions ( SDP, Specificity-Determining Positions ) that determine differences in the functional specificity. ... 2004) Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families. ...

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• SDPsite - Algorithm Format requirements
• SDPlight
• SDPsite

SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins . ... Amino acid residues that determine differences in protein functional specificity and account for correct recognition of interaction partners, are usually thought to correspond to those positions of a protein multiple alignment, where the distribution of amino acids is closely associated with grouping of proteins by specificity. ... As colored columns of the alignment. ...

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• About this project

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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Bioinf ormatic analysis of diverse protein superf amilies to design improved enzymes Dmitry Suplatov , Nikolay Panin, Tatyana Shcherbakova, Ilyas Khaliullin, Vytas Svedas Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and F aculty of Bioengineering and Bioinformatics ... D. Suplatov, E. Kirilin, V. Takhaveev, V. Svedas (2014) Zebra: web-server for bioinformatic analysis of diverse protein families, J.Biomol.Struct.Dyn., ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/217.pdf

... HELP ON SCREENING OF PATTERN OR ALIGNMENT AGAINST PROTEIN PROTEIN . ... The method of looking for all pattern entries (possibly inexact) in PROTEIN databank is almost the same as in PROSITE screening procedure. ... The screening by query alignment, based on the same principle: the alignment is seen as a pattern defining letter's frequencies in every position. The pattern example: . ... the only one capital letter at a position means that only given residue should be at the position. ...

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• RNA secondary structure prediction

Please enter the lightcurve file name and period search parameters: . Lightcurve file: . ... Apply the Heliocentric correction and convert all dates to Terrestrial Time (TT)? ... Also, the Heliocentric correction cannot be applied to such lightcurves. ... This period search service is also available at the mirror sites: Mirror 1 , Mirror 2 , Mirror 3 , Mirror 4 . You may download the latest source code distribution and install the period search service at your own web server. ...

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... day commit -- a lot of changes fasta.py: universal save_fasta() determine_long_line -- for determine length of fasta sequence string in user input everywhere: standart long_line=60 -- 70 blocK. sequences _chains: returns sequences in order as in project added monomer pdb_secstr to store secondary structure pdb adding: some improvements and fixes fix in from_pdb_ chain : use all peptides, not only first ... 22 * self.positions -- sorted list of positions of the project.alignment that . ...

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• allpy: fb3164f03984 lib/block.py
• allpy: b2ec17578145 lib/block.py
• allpy: 6dfc736f37a9 lib/block.py

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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Nominal modification at the Syntax-Semantics Interface: comparing attributive adjectives in Italian and English In his seminal work, Bolinger (1967) discusses an asymmetry between two functions that adjectives can perform, namely attributive and predicative modification; furthermore, he points out that the syntactic asymmetry between the pre- and the post-nominal position of a number of adjectives in English is related to a semantic difference between reference- and referentmodification, respectively. ...

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• http://www.philol.msu.ru/~otipl/new/fdsl/abstracts/marusic.pdf
• http://www.philol.msu.ru/~otipl/new/fdsl/abstracts/steriopolo.pdf
• http://www.philol.msu.ru/~otipl/new/mscl/2008/abstracts/mikhina.pdf

SDPpred: Results . ... The number of proteins in the alignment: 21 . The alignment length: 988 . 38 SDPs predicted . Cutoff probability: 1.85e-171 . ... Amino acid residues in SDPs for protein PMS1_HUMAN PMS2_HUMAN PMS2_MOUSE PMS1_SCHPO PMS1_YEAST MUTL_THEMA MUTL_AQUAE MUTL_AQUPY MUTL_BORBU HEXB_STRR6 MUTL_BACSU MUTL_RICPR MLH1_HUMAN MLH1_YEAST MUTL_CHLPN MUTL_CHLTR MUTL_ECOLI MUTL_HAEIN MUTL_SYNY3 MUTL_TREPA MUTL_THEAQ . ... Protein Sci 13(2): 443-56. ...

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• GeneBee service result
• Changeset 20:ee776b889df7 for tanchiki тАУ Tanchiki
• Changeset 20:ee776b889df7 тАУ Tanchiki

Электронная библиотека . ... Главная Ex Libris Книги Журналы Статьи Серии Каталог Wanted Загрузка ХудЛит Справка Поиск по индексам Поиск . ... Поиск по указателям . Результат поиска . Книга . Страницы для поиска . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Shorter L.R. - Problems And Worked Solutions In Vector Analysis :: Электронная
• Burden R.L., Faires J.D. - Numerical analysis :: Электронная библиотека
• Aven O.I., Coffman E.G., Kogan Y.A. - Stochastic Analysis of Computer Storage

... Форумы > Аспирантура > Тема . ... PhD position in the University of Florida . PhD position is available in the department of Industrial and Systems Engineering, University of Florida. ... Risk Management and Financial Engineering Lab website: http://www.ise.ufl.edu/rmfe/ . ... Statistical estimation in terms of factor models can be tuned to risk preferences in order to achieve better performance when applied to portfolio optimization. ... University of Florida, November 2011. ...

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• MMOnline | Форумы | Разное | Graduate position at Sberbank Treasury
• MMOnline | Форумы | Аспирантура | PhD positions in logic and AI, Vancouver
• MMOnline | Форумы | Аспирантура | Phd positions at the Max-Planck Institute for

... Laboratory of Mathematical Methods of Image Processing . ... Image analysis . ... Ringing effect . ... It can be efficiently used as a post-processing method for global image deblurring methods . ... Development of edge width estimation algorithm is important for image enhancement and image quality analysis methods. ... Ringing effect so known as Gibbs phenomenon in mathematical methods of image processing is the annoying effect in images and video appeared as rippling artifact near sharp edges. ...

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Evalign . Evalign is a computerised evaluation method for protein sequence alignment algorithm. It compares computer alignments with structural alignments of protein sequences and tells how correct your sequence alignment program is. It gives additional information on the characteristics of different alignment algorithms and shows types specific failings in alignment. ... None . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

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• Further Information and Bibliography
• Evgeny Rodichev home page
• SAL- Other Scientific Fields - Chemistry, Biology Related - GRS

... The example of the situational radiological analysis (incident with Polonium-210) . Abstract In the paper the data about nuclear, physical, chemical and radiobiological properties of polonium - 210 are summarized, the features of incorporation, transport and deposition of a radionuclide in different human organs are reviewed. ... Moscow University Chemistry Bulletin . 2008, Vol. ... Copyright (C) Chemistry Dept., ... Copyright (C) Chemisty Department of Moscow State University . ...

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• Segmented-flow analysis: on-line microwave sample processing for analysis of

Описание вакансии: . ... The project will focus on the structure-property/toxicity studies of different nanomaterials. ... Experience: The background in theoretical QSAR/QSPR and computational chemistry studies is essential. ... следующая вакансия . список всех вакансий . добавить вакансию . редактировать эту вакансию . ...

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• "Postdoctoral research position" - вакансия в разделе "Работа для химиков"
• "Phd position in homogenous catalysis" - вакансия в разделе "Работа для
• "Phd student position in chemical biology and molecular imaging" - вакансия в

This diagram shows how the 'vertical-align' properties on cells combine to determine the height of the row containing the cells. The diagram also illustrates the meaning of some values of 'vertical-align' that apply to table cells: baseline, top, bottom, and middle. The diagram shows a row of five (labeled) table cells of varying heights and alignments. ... The first cell is aligned with the row baseline and extends to just below the row top. ...

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• Dynamic HTML in Communicator
• Long description for example illustrating positioning with respect to a
• Warbling Chirplet: Analysis of Signals of Oscillating Frequency

... Demidovich Vasiliy Borisovich . Deputy Head of the Department . ... numerical analysis, qualitative theory of diffrential and finite-difference equations, approximation theory, theory of Chebyshev generalized polynomials, optimization in actuarial mathematics . Vasiliy Borisovich Demidovich (born. 30.08.1943 in Moscow)became a staff member of GPC department in 1970. ... 119992 Moscow, GSP-1, Leninskie Gory, MSU, mechanics and mathematics department, OPU, Room 13-14 . ...

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• Riutin Konstantin Sergeevich | Department: General Problems of Control. Faculty
• Tikhomirov Vladimir Mikhaylovich | Department: General Problems of Control.
• Magaril-Ilyayev Georgiy Georgiyevich | Department: General Problems of Control.

Regular algorithms for the analysis of radio-location images" . Ageev A.L., Korshunov M.E. The problem of navigation on the basis of radio-location images is considered. ... In order to solve the navigation problem, it is necessary to determine, with a high accuracy, the coordinates of the point from which an image is formed. ... A new regularization algorithm is proposed to enhance the accuracy of determining the coordinates. ... PostScript (in Russian) (97.4MB) . PDF (in Russian) (5.87MB) . ...

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• "A numerical algorithm for the analysis of viscoelastic waves in the
• "A comparative performance analysis of genetic algorithms and the Metropolis
• "Accuracy estimation and comparative analysis of difference schemes of

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