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121. SDPsite - PF04461
... SDPsite predicts following important positions (numbering corresponds to 1in0 ): . ... 77S, 70I, 39I, 122Q, 55D, 15V, 2P, 1M, 19V, 159N, 111T, 21N, 75E, 87H, 16R, 106M, 20E, 53E, 66I, 153G, 57Q, 37A, 33R, 33R, 112K, 112K, 112K, 92Y, 62I, 6I, 38V . ... 4F, 5D, 17N, 31D, 89G, 138D, 139D, 160N, 158F, 63E, 14E, 29R, 72R, 108K, 109K, 120K, 131R, 135K . ... 14E, 15V, 16R, 17N, 19V, 20E, 21N . ... 4F, 55D, 66I, 108K, 109K, 111T, 112K, 131R, 158F, 159N, 160N . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF04461.html -- 4.1 Кб -- 06.06.2008
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122. SDPsite - PF06071
... This family contains a protein with resolved 3D structure: ENGD_HAEIN/278-361 , pdb ID: 1jal . SDPsite predicts following important positions (numbering corresponds to 1jal ): . ... Mapping predictions onto structure of 1jal : . Associated grouping: . Group 1 . Q8SRN9_ENCCU/277-360 . ... O25293_HELPY/282-365 . Q9PP03_CAMJE/283-366 . ENGD_HAEIN/278-361 . Q8PC60_XANCP/279-362 . Q8XF19_SALTI/279-362 . Q9AAW3_CAUCR/282-365 . ... Q8CMP8_STAEP/281-364 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF06071.html -- 5.6 Кб -- 06.06.2008
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123. SDPsite - PF00313
... This family contains a protein with resolved 3D structure: CSP_THEMA/1-65 , pdb ID: 1g6p . SDPsite predicts following important positions (numbering corresponds to 1g6p ): . ... 56G, 9D, 8F, 53G, 27V, 6K, 13G, 24D, 7W . ... 6K, 7W, 8F, 9D, 13G, 15G, 16F, 24D, 27V . ... Mapping predictions onto structure of 1g6p : . ... CSPF_STRCO/1-67 . CSP7_STRCL/1-66 . CSPA_STIAU/1-67 . CSPD_ECOLI/1-67 . CSPD_HAEIN/1-67 . ... O65639_ARATH/10-77 . ... O34279_YERPE/4-70 . ... UNR_RAT/673-738 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF00313.html -- 5.0 Кб -- 06.06.2008
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124. SDPsite - PF00736
... This family contains a protein with resolved 3D structure: EF1B_METTH/1-88 , pdb ID: 1gh8 . SDPsite predicts following important positions (numbering corresponds to 1gh8 ): . ... 50A, 81E, 10V, 11M, 62G, 7T, 78S, 87R, 34T, 1M, 26I . ... 48G, 44P, 47F, 60D, 9K, 81V, 11M, 85E, 4V, 71E, 77E, 33G, 67E, 18D, 26I, 8I . ... 7T, 81E, 9K, 10V, 11M, 50A, 78S . ... 48G, 33G, 34T, 60D, 62G, 87R . Mapping predictions onto structure of 1gh8 : . ... EF1B_ARCFU/1-88 . ... EF1B_SULSO/1-88 . EF1B_METTH/1-88 ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF00736.html -- 4.2 Кб -- 06.06.2008
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125. SDPsite - PF01300
... This family contains a protein with resolved 3D structure: YRDC_ECOLI/19-190 , pdb ID: 1hru . SDPsite predicts following important positions (numbering corresponds to 1hru ): . ... 27T, 117R, 26P, 29A, 175P, 59I, 32G, 28E, 170G, 25Y, 34G, 151V, 176S, 108T, 30V . ... 132T, 57G, 236R, 31F, 184P, 182G, 177S, 179N . ... 25Y, 26P, 27T, 28E, 29A, 30V, 31F, 32G, 117R, 170G, 175P, 176S . ... 57G, 59I, 108T, 177S, 179N . Mapping predictions onto structure of 1hru : . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01300.html -- 4.5 Кб -- 06.06.2008
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126. SDPsite - PF01912
... This family contains a protein with resolved 3D structure: IF6_METJA/5-207 , pdb ID: 1g61 . SDPsite predicts following important positions (numbering corresponds to 1g61 ): . ... 2121S, 2147L, 2204S, 2199C, 2202A, 2157T, 2026T, 2089K, 2153N, 2127F, 2174F, 2128K, 2191K, 2021T, 2077E, 2149T, 2025I, 2113T, 2182E, 2023E, 2184I, 2180K, 2090E, 2082D, 2041S, 2156V, 2117G, 2087F, 2193T, 2028L, 2049L, 2186K . ... 2021T, 2023E, 2025I, 2026T, 2028L, 2049L, 2087F, 2089K, 2090E, 2156V, 2157T, 2202A, 2204S . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01912.html -- 4.2 Кб -- 06.06.2008
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127. SDPsite - PF01958
... This family contains a protein with resolved 3D structure: Q9X1X6_THEMA/139-240 , pdb ID: 1h2h . SDPsite predicts following important positions (numbering corresponds to 1h2h ): . ... 163I, 210N . ... 160P, 150G, 164N, 187D, 162N, 218N, 219P . ... 162N, 163I, 164N . ... 187D, 210N . Mapping predictions onto structure of 1h2h : . Associated grouping: . Group 1 . ... Q6LZ92_METMP/165-265 . Y915_METJA/165-265 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01958.html -- 4.2 Кб -- 06.06.2008
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128. SDPsite - PF02576
... This family contains a protein with resolved 3D structure: Y552_STRPN/14-155 , pdb ID: 1ib8 . SDPsite predicts following important positions (numbering corresponds to 1ib8 ): . ... 42L, 56D, 75P, 95T, 57T, 91R, 60L, 55N, 108H, 43S, 31I, 85T, 107I, 92P, 132E, 73P, 127A, 67V, 34G, 48K, 145T, 52I, 86S, 90E, 121F, 101G, 96K, 69D, 47D, 122E, 66P, 70T . ... 90E, 91R, 92P, 95T, 96K, 99R, 107I, 108H, 121F, 122E . ... Y3828_ANASP/12-149 . ... Y1282_HAEIN/11-147 . ... Y1148_STAAW/11-151 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02576.html -- 5.3 Кб -- 06.06.2008
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129. SDPsite - PF04430
. Home & Submit job . Algorithm & . Format requirements . Contact us . Gallery of examples . This family contains a protein with resolved 3D structure: O27021_METTH/2-108 , pdb ID: 1ihn . SDPsite predicts following important positions (numbering corresponds to 1ihn ): . SDPs: . CPs: . Best cluster: . Second best cluster: . Mapping predictions onto structure of 1ihn : . Associated grouping:
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF04430.html -- 3.4 Кб -- 06.06.2008
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130. SDPsite - PF01965
... This family contains a protein with resolved 3D structure: PFPI_PYRHO/29-166 , pdb ID: 1g2i . SDPsite predicts following important positions (numbering corresponds to 1g2i ): . ... 101H, 152A, 156A, 95P, 153D, 157W . ... 152A, 153D, 156A, 157W . ... 78G, 101H . Mapping predictions onto structure of 1g2i : . Associated grouping: . Group 1 . ... PFPI_PYRHO/29-166 . ... Y1281_ARCFU/29-166 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01965.html -- 5.0 Кб -- 06.06.2008
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131. SDPsite - PF01984
. Home & Submit job . Algorithm & . Format requirements . Contact us . Gallery of examples . This family contains a protein with resolved 3D structure: DNBP_METTH/7-110 , pdb ID: 1eij . SDPsite predicts following important positions (numbering corresponds to 1eij ): . SDPs: . CPs: . 75G, 10Q, 49R, 65E, 47R, 2R, 58P, 9L, 42L, 46A, 50L, 55L, 68L . Best cluster: . 9L, 10Q, 46A, 47R, 49R, 50L, 55L . Second best cluster: . 65E, 68L . Mapping predictions onto structure of 1eij : . Associated grouping:
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01984.html -- 3.5 Кб -- 06.06.2008
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132. SDPsite - PF02367
... This family contains a protein with resolved 3D structure: Y065_HAEIN/14-141 , pdb ID: 1fl9 . SDPsite predicts following important positions (numbering corresponds to 1fl9 ): . ... 97F, 71V, 84F, 72E, 102D, 49L, 54L, 140I, 62N, 136D, 69T, 105N, 14M, 103Y, 67T, 32K, 98M, 126D, 141E, 18G . ... 116W, 84H, 66P, 88Y, 40G, 45G, 86D, 43G, 74Y, 46K, 47T . ... 45G, 46K, 47T, 49L, 54L, 66P, 67T, 69T, 71V, 72E, 74Y, 84F, 86D, 97F, 98M, 102D, 103Y . ... 140I, 141E . ... Q9Z7P7_CHLPN/14-136 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02367.html -- 4.3 Кб -- 06.06.2008
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133. SDPsite - PF02545
... This family contains a protein with resolved 3D structure: MAF_BACSU/3-188 , pdb ID: 1ex2 . SDPsite predicts following important positions (numbering corresponds to 1ex2 ): . ... 13R, 168Y . ... 142Y, 72D, 153G, 178G, 14R, 34E, 85K, 108T, 170G, 86P, 130F, 7L, 9S, 11S, 18L . ... 72D, 9S, 11S, 13R, 142Y, 18L . ... Mapping predictions onto structure of 1ex2 : . ... Y1161_HELPJ/1-189 . ... Y905_SYNY3/3-195 . ... Y1718_AQUAE/1-189 . ... MAF_BACSU/3-188 . ... Y022_CHLPN/3-195 . Y349_CHLTR/3-195 ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02545.html -- 4.0 Кб -- 06.06.2008
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134. SDPsite - PF03442
... This family contains a protein with resolved 3D structure: Q45996_CLOCE/195-278 , pdb ID: 1ehx . SDPsite predicts following important positions (numbering corresponds to 1ehx ): . ... 5T, 82T, 21T, 50V, 6I, 60L, 76T, 84T, 72F, 42Q, 42Q, 17S, 12S, 51T, 39-, 44T, 85V, 68L . ... 20D, 21T, 42Q, 43Y, 44T, 50V, 51T, 57Y, 60L, 64N, 68L, 84T, 85V . ... Mapping predictions onto structure of 1ehx : . ... CBPA_CLOCL/1609-1697 . Q45996_CLOCE/1315-1397 . Q977Y4_CLOAB/762-849 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03442.html -- 4.4 Кб -- 06.06.2008
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135. SDPsite - PF04296
... This family contains a protein with resolved 3D structure: Q97S59_STRPN/6-85 , pdb ID: 1g2r . SDPsite predicts following important positions (numbering corresponds to 1g2r ): . ... 81L, 65F, 42A, 34V, 68S, 61K, 53N, 51L, 16E, 17V, 66N, 39T, 14S, 13V, 15N, 50K, 78Y, 36I . ... 11S, 51Y, 9R, 25R, 48R . ... 9R, 11S, 14S, 50K, 53N, 65F, 78Y, 81L . ... 15N, 16E, 17V . Mapping predictions onto structure of 1g2r : . ... Q97I53_CLOAB/6-85 . ... Q9KA75_BACHD/6-85 . ... Q97S59_STRPN/6-85 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF04296.html -- 4.3 Кб -- 06.06.2008
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136. SDPsite - PF01205
... This family contains a protein with resolved 3D structure: YIGZ_ECOLI/17-126 , pdb ID: 1vi7 . SDPsite predicts following important positions (numbering corresponds to 1vi7 ): . ... 120Y, 115G, 105Y, 119A, 116L, 85P, 114G, 62G . ... 54H, 25F, 74D, 75D, 107G, 108G . ... 114G, 115G, 116L, 119A, 120Y . ... 54H, 74D, 75D, 105Y, 107G, 108G . Mapping predictions onto structure of 1vi7 : . ... Y722_HAEIN/17-126 . YIGZ_ECOLI/17-126 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01205.html -- 4.2 Кб -- 06.06.2008
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137. SDPsite - PF01206
... This family contains a protein with resolved 3D structure: SIRA_ECOLI/6-79 , pdb ID: 1dcj . SDPsite predicts following important positions (numbering corresponds to 1dcj ): . ... 45D, 43A, 51D, 38T, 75Y, 14A, 50R, 30V, 69D, 76L, 11T, 59M, 17L, 17L, 16G, 16G . ... 19C, 20P . ... 14A, 16G, 17L, 19C, 20P, 43A, 45D, 50R, 51D . ... Mapping predictions onto structure of 1dcj : . ... Y990_METJA/4-75 . YEED_ECOLI/3-74 . ... YRKI_BACSU/3-74 . YRKF_BACSU/4-75 ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01206.html -- 3.9 Кб -- 06.06.2008
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138. SDPsite - PF01725
... This family contains a protein with resolved 3D structure: NTPA_METJA/11-189 , pdb ID: 1b78 . SDPsite predicts following important positions (numbering corresponds to 1b78 ): . ... 185F, 72E, 50L, 47Q, 13F, 130F, 101I, 97G, 106E, 103K, 53V, 71V, 35E, 98N, 95T, 77F, 46I, 43Y, 104L, 93Q, 96I . ... 93Q, 95T, 96I, 97G, 98N, 101I, 103K, 104L . ... 43Y, 46I, 47Q, 53V, 71V, 72E . Mapping predictions onto structure of 1b78 : . ... NTPA_METJA/11-189 . O27475_METTH/3-180 . ... O59580_PYRHO/3-180 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01725.html -- 4.1 Кб -- 06.06.2008
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139. SDPsite - PF02126
... This family contains a protein with resolved 3D structure: PHP_ECOLI/1-292 , pdb ID: 1bf6 . SDPsite predicts following important positions (numbering corresponds to 1bf6 ): . ... 12H, 14H, 158H, 186H, 154P, 267P, 287P, 7G, 47G, 82G, 112G, 121G, 152G, 176G, 203G, 209D, 233G, 243D, 273G . ... 12H, 14H, 158H, 186H, 209D, 243D . ... 7G, 47G, 121G, 152G, 154P, 287P . Mapping predictions onto structure of 1bf6 : . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02126.html -- 3.6 Кб -- 06.06.2008
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140. SDPsite - PF03737
... This family contains a protein with resolved 3D structure: RRAA1_VIBCH/1-153 , pdb ID: 1vi4 . ... 109G, 88W, 65D, 33F, 46N, 6T, 74L, 147A, 80A, 113L, 153L, 69S, 17V, 53L, 86N, 79L, 57G, 89E, 108L, 134M, 77D, 94Y, 19L, 122K, 26N, 67H, 31S, 116S, 135Q, 16Q, 111K, 34W, 37I, 30R, 139V . ... 36G, 91G, 96G, 149D, 152G, 142P, 144D, 40T, 99R . ... 26N, 30R, 31S, 33F, 34W, 36G, 37I, 53L, 57G, 79L, 80A, 86N, 88W, 89E, 91G, 108L, 109G, 111K, 147A, 149D, 152G, 153L . ... RRAA1_VIBCH/1-153 . RRAA_PSEAE/1-153 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03737.html -- 4.2 Кб -- 06.06.2008
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