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61. SDPsite - PF01689
... This family contains a protein with resolved 3D structure: MHPD_ECOLI/3-221 , pdb ID: 1sv6 . SDPsite predicts following important positions (numbering corresponds to 1sv6 ): . ... Best cluster: . Second best cluster: . Mapping predictions onto structure of 1sv6 : . Associated grouping: . Group 1 . ... MHPD_ECOLI/3-221 . ... O24831_ACISP/3-222 . XYLJ_PSEPU/3-222 . O51854_PSEPU/3-221 . Q52038_PSEPS/3-221 ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01689.html -- 4.3 Кб -- 06.06.2008
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62. SDPsite - PF01895
. Home & Submit job . Algorithm & . Format requirements . Contact us . Gallery of examples . This family contains a protein with resolved 3D structure: PHOU2_THEMA/119-204 , pdb ID: 1sum . SDPsite predicts following important positions (numbering corresponds to 1sum ): . SDPs: . CPs: . Best cluster: . Second best cluster: . Mapping predictions onto structure of 1sum : . Associated grouping:
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01895.html -- 3.4 Кб -- 06.06.2008
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63. SDPsite - PF03838
... This family contains a protein with resolved 3D structure: RECU_BACSU/30-196 , pdb ID: 1rzn . SDPsite predicts following important positions (numbering corresponds to 1rzn ): . ... 42N, 188Y, 184P, 129Q, 77E, 46L, 132I, 54H, 78A, 53I, 116H, 106N, 52V, 123M, 185R, 103E, 133C, 105K, 120I, 57P, 91I, 152F, 193E, 47T, 172E, 176Y, 154F, 128A, 126V, 194Q, 168K, 40E, 114N . ... 118H, 88Y, 31G, 87D, 90G, 94G, 99F, 134F, 59P, 92Y, 122H, 32M, 35E, 55K, 102K, 119Q . ... 118H, 119Q, 120I, 122H, 123M . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03838.html -- 4.3 Кб -- 06.06.2008
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64. SDPsite - PF03960
... This family contains a protein with resolved 3D structure: Q9HXX5_PSEAE/6-115 , pdb ID: 1rw1 . SDPsite predicts following important positions (numbering corresponds to 1rw1 ): . ... 11C, 93P, 92R, 104G, 87P, 94V, 89M, 66L, 43L, 90I . ... 7G, 8I, 13T, 32D, 57N, 90I, 92R, 93P, 94V, 104G, 105F, 106K, 110Y . ... Mapping predictions onto structure of 1rw1 : . Associated grouping: . Group 1 . ... ARSC_HAEIN/6-116 . ... ARSC_NEIMB/7-117 . ... Q9CHE4_LACLA/5-116 . ... Q9CGN5_LACLA/5-115 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03960.html -- 5.2 Кб -- 06.06.2008
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65. SDPsite - PF04509
... This family contains a protein with resolved 3D structure: Q9X1V3_THEMA/84-120 , pdb ID: 1squ . SDPsite predicts following important positions (numbering corresponds to 1squ ): . ... 103K, 95M, 93G, 100L . ... 100L, 103K . Mapping predictions onto structure of 1squ : . Associated grouping: . Group 1 . Q9X1V3_THEMA/84-120 . Q97LH5_CLOAB/84-120 . ... Q9KUY1_VIBCH/84-120 . ... Q97GZ6_CLOAB/104-141 . ... O58224_PYRHO/106-143 . ... Q9X006_THEMA/105-142 . ... Q48298_HALSA/105-142 ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF04509.html -- 4.9 Кб -- 06.06.2008
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66. SDPsite - PF04946
... This family contains a protein with resolved 3D structure: Q9I3Z5_PSEAE/1-116 , pdb ID: 1s7i . SDPsite predicts following important positions (numbering corresponds to 1s7i ): . ... 14Y, 101I, 60A, 10L, 105I, 34E, 49I, 104K, 9Y, 9Y, 9Y, 12L, 62T, 11C, 51S, 31I, 20L, 88Y, 56S, 53A, 63L, 35C . ... 76P, 46G, 74D, 75G, 86G, 9Y, 7M, 82E, 114E, 116R . ... 9Y, 101I, 11C, 12L, 14Y, 31I, 34E, 35C, 51S, 53A, 86G, 88Y, 101I, 104K, 105I, 114E, 116R . ... Q98HH2_RHILO/1-124 . Q98H82_RHILO/1-124 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF04946.html -- 4.0 Кб -- 06.06.2008
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67. SDPsite - PF03641
... This family contains a protein with resolved 3D structure: Q9X0E5_THEMA/48-170 , pdb ID: 1rcu . SDPsite predicts following important positions (numbering corresponds to 1rcu ): . ... 86F, 84-, 52S, 120-, 49E, 93L . ... 122P, 105G, 108G, 104G, 89R, 112E, 109T . ... 49E, 52S, 84-, 86F, 89R, 93L, 104G, 105G, 108G, 109T, 112E . ... 120-, 122P . Mapping predictions onto structure of 1rcu : . Associated grouping: . Group 1 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03641.html -- 4.9 Кб -- 06.06.2008
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68. SDPsite - PF04107
... This family contains a protein with resolved 3D structure: YBDK_ECOLI/12-292 , pdb ID: 1r8g . ... 219S, 278L, 252N, 57S, 258Q, 157F, 244P, 212S, 138H, 237E, 186F, 105W, 247L, 215T, 190P, 242D, 54I, 134G, 65V, 253M, 55T, 165S, 241M, 284R, 289R, 227I, 276D, 97G, 45I, 279L, 291G, 233F, 136H, 255G, 62A, 175D, 119T, 232H, 261A . ... 175D, 54I, 55T, 57S, 62A, 97G, 98G, 134G, 136H, 138H, 157F, 165S, 166A, 168S, 180S, 182R, 227I, 242D, 244P, 247L, 252N, 255G, 258Q, 284R, 289R, 291G . ... YBDK_ECOLI/12-292 ....
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF04107.html -- 4.3 Кб -- 06.06.2008
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69. SDPsite - PF06954
... This family contains a protein with resolved 3D structure: RSN_MOUSE/1-110 , pdb ID: 1rfx . SDPsite predicts following important positions (numbering corresponds to 1rfx ): . ... 35V, 67A, 80S, 26F, 77T, 49D, 130L, 82G, 82G, 82G, 82G, 82G, 82G, 82G, 79S, 79S, 71I, 73L, 51A, 91T . ... 49D, 51A, 67A, 71I, 73L, 75C, 77T, 79S, 80S, 82G, 87C . ... 35V, 91T . Mapping predictions onto structure of 1rfx : . ... RSN_MOUSE/1-110 . Q8K4J7_RAT/1-110 . ... RSNA_RAT/1-110 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF06954.html -- 3.9 Кб -- 06.06.2008
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70. SDPsite - PF07972
... This family contains a protein with resolved 3D structure: NRDI_BACSU/4-113 , pdb ID: 1rlj . SDPsite predicts following important positions (numbering corresponds to 1rlj ): . ... 7D, 51P, 77G, 102S, 55Q, 83S, 98K, 49Q, 79N, 5I, 90Q, 86T, 76W, 84A, 59E, 53S, 62A . ... 51P, 62A, 38F, 57F, 59E, 61Y, 62A . Mapping predictions onto structure of 1rlj : . Associated grouping: . ... NRDI_STAAR/3-115 . ... NRDI_WIGBR/5-123 . ... NRDI_MYCGE/23-143 . NRDI_YERPE/5-124 . ... Q8DXB0_STRA5/6-140 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF07972.html -- 5.2 Кб -- 06.06.2008
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71. SDPsite - PF01075
... SDPsite predicts following important positions (numbering corresponds to 1psw ): . ... 203A, 131M, 221S, 220G, 174F, 228G, 186C, 113R, 88P, 90S, 256V, 86V, 135Y, 196R, 231I, 119D, 191F, 89N, 84A, 100A, 193P, 268N, 289P, 263K, 202Y, 194A, 312H, 171C, 103P, 102I, 255A, 120V, 123L, 129P, 218L, 190E, 309T, 110G, 324H, 219F, 96V, 264A, 260A, 238E, 139A, 139A, 182M, 306R, 136I, 169Y, 250T, 248G, 109R, 213G, 71K, 232L, 189A . ... 86V, 88P, 89N, 90S, 107G, 109R, 110G, 113R, 119D, 120V . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01075.html -- 4.7 Кб -- 06.06.2008
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72. SDPsite - PF01987
... This family contains a protein with resolved 3D structure: Q8P2Q3_STRP3/6-231 , pdb ID: 1pg6 . SDPsite predicts following important positions (numbering corresponds to 1pg6 ): . ... 17P, 90P, 39H, 154N, 76T, 152L, 109N, 173N, 108L, 38Y, 143M, 45L, 89A, 159I, 179W, 113F, 121Q, 85K, 15Q, 60V, 142V, 102G, 107R, 42N, 145T, 95Q, 32Q, 87A, 24E, 116L, 118G, 144T, 156F . ... 17P, 32Q, 34G, 38Y, 39H, 76T, 87A, 89A, 90P, 95Q, 107R, 108L, 109N, 113F, 116L, 121Q, 142V, 144T, 145T, 152L, 154N, 159I, 179W . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01987.html -- 5.7 Кб -- 06.06.2008
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73. SDPsite - PF02585
... This family contains a protein with resolved 3D structure: O50426_MYCTU/8-158 , pdb ID: 1q74 . SDPsite predicts following important positions (numbering corresponds to 1q74 ): . ... 72L, 136Y, 142Y . ... 147H, 144H, 43G, 68R . ... 43G, 68R, 72L, 136Y, 142Y, 144H, 147H . ... Mapping predictions onto structure of 1q74 : . ... Q8KN03_9ACTO/13-129 . ... Q8U6L1_AGRT5/13-129 . ... Q9FC70_STRCO/20-149 . Q9RD73_STRCO/20-149 . Q9K7P1_BACHD/8-138 . ... Q8CTR5_STAEP/8-138 . Q81WT0_BACAN/8-138 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02585.html -- 7.4 Кб -- 06.06.2008
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74. SDPsite - PF02627
... This family contains a protein with resolved 3D structure: Q9X1V5_THEMA/22-105 , pdb ID: 1p8c . SDPsite predicts following important positions (numbering corresponds to 1p8c ): . ... Associated grouping: . Group 1 . ... Q978P3_THEVO/22-105 . Q9HLI4_THEAC/22-105 . ... Q9X1V5_THEMA/22-105 . ... YAC7_ALCEU/24-107 . ... Y1053_HAEIN/24-107 . Q8GQ78_PSEAE/24-107 . ... Q89PM8_BRAJA/34-118 . ... Q8E1D2_STRA5/17-102 . ... DC4C_ACIAD/35-119 . ... Q8NUW4_STAAW/10-92 . ... Q7VW83_BORPE/12-94 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02627.html -- 12.1 Кб -- 06.06.2008
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75. SDPsite - PF03937
... This family contains a protein with resolved 3D structure: Q9JR91_NEIMA/4-82 , pdb ID: 1puz . SDPsite predicts following important positions (numbering corresponds to 1puz ): . ... 46F, 14F, 23L, 57L, 35F, 27F, 72L, 12I, 76L, 25L, 69K, 9K, 52F, 47S, 39S, 20L, 13R, 31M . ... 60L, 19G, 54D, 30F, 18R, 22E . ... 12I, 13R, 18R, 19G, 20L, 22E, 23L, 25L, 27F, 30F, 31M, 35F, 46F, 54D, 57L . ... Mapping predictions onto structure of 1puz : . ... Q9I5G9_PSEAE/2-83 . YGFY_ECOLI/1-82 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03937.html -- 4.2 Кб -- 06.06.2008
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76. SDPsite - PF07876
... This family contains a protein with resolved 3D structure: POP3_ARATH/8-104 , pdb ID: 1q4r . SDPsite predicts following important positions (numbering corresponds to 1q4r ): . ... Mapping predictions onto structure of 1q4r : . ... Q9F304_STRCO/2-93 . Q82QQ6_STRAW/2-93 . ... Q6J6I3_ENTCL/2-99 . Q84FK9_9ENTR/2-99 . ... O31026_VIBCH/2-98 . Q6LGQ4_PHOPR/2-98 . ... Q7WCF6_BORPA/2-96 . ... Q9A628_CAUCR/2-100 . Q98BN1_RHILO/2-96 . ... Q9SYD8_ARATH/5-102 . Q9AMS9_BRAJA/2-94 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF07876.html -- 5.5 Кб -- 06.06.2008
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77. SDPsite - PF01398
... This family contains a protein with resolved 3D structure: O28085_ARCFU/2-93 , pdb ID: 1oi0 . SDPsite predicts following important positions (numbering corresponds to 1oi0 ): . ... 25E . ... 32G, 68T, 67G, 28A . ... 67G, 68T . ... 25E, 28A . Mapping predictions onto structure of 1oi0 : . ... PSD7_ARATH/12-125 . ... O82466_ORYSA/51-165 . ... RPN8_SCHPO/12-125 . ... CSN5_CAEEL/51-165 . ... O28085_ARCFU/2-93 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF01398.html -- 4.9 Кб -- 06.06.2008
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78. SDPsite - PF02590
... This family contains a protein with resolved 3D structure: Y844_THEMA/1-150 , pdb ID: 1o6d . SDPsite predicts following important positions (numbering corresponds to 1o6d ): . ... 14F, 12D, 102P, 15I, 124F, 11L, 129T, 103Y, 39R, 11-, 10K, 19I, 13G, 29F, 141F, 71K . ... 150H, 126H, 149Y, 22Y, 138F, 104G, 100G, 135E, 139R, 73G, 52E . ... 102P, 11L, 12D, 13G, 14F, 15I, 19I, 39R, 100G, 102P, 103Y, 104G, 124F, 126H, 129T . ... Associated grouping: . ... Y2195_RALSO/1-154 . ... Y4004_RHILO/1-158 . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF02590.html -- 4.7 Кб -- 06.06.2008
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79. SDPsite - PF03009
... 16N, 11A, 211I, 100E, 34L, 61K, 40K, 173E, 194L, 83E, 121S, 156E, 66T, 152V, 172L, 104A, 95N, 214E, 180R, 176V, 210V, 39S, 115K, 21F, 123-, 108L, 113K, 73L, 18L, 79-, 179L, 58L, 88V, 195N, 147S, 155V, 12K, 110-, 197P, 36V, 136Y, 139L, 208D, 109E, 44V, 30N, 120S, 22M, 114R, 93I, 138Y, 72E . ... 73L, 83E, 16N, 180R, 211I, 22M, 34L, 36V, 44V, 48H, 49D, 79-, 83E, 88V, 93I, 95N, 108L, 109E, 110-, 113K, 114R, 120S, 121S, 139L, 192W, 194L, 195N, 210V, 211I, 213D, 214E . ... 172L, 173E, 176V, 179L, 180R . ...
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03009.html -- 5.5 Кб -- 06.06.2008
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80. SDPsite - PF03473
. Home & Submit job . Algorithm & . Format requirements . Contact us . Gallery of examples . This family contains a protein with resolved 3D structure: YIIM_ECOLI/37-162 , pdb ID: 1o65 . SDPsite predicts following important positions (numbering corresponds to 1o65 ): . SDPs: . CPs: . Best cluster: . Second best cluster: . Mapping predictions onto structure of 1o65 : . Associated grouping:
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Ссылки http://bioinf.fbb.msu.ru/SDPsite/examples/PF03473.html -- 3.4 Кб -- 06.06.2008
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