... annotate . ... bnagaev@240 . 1 import base . ... me@280 . ... dendik@382 . 4 import dna . ... 6 class Monomer ( base . ... 7 """DNA monomers: nucleotides.""" . ... 8 type = 'dna' . ... 9 types = dna . ... dna ) . ... 15 class Sequence ( base . ... 18 class Alignment ( base . Alignment ): . ... 21 class Block ( Alignment , base . ...

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• allpy: setup.py annotate
• allpy: Makefile annotate
• allpy: SETPATH annotate

A numerical method for approximate calculation of the value function in the optimal control problem with a terminal functional" . Kamzolkin D.V. The optimal control problem with a terminal functional is considered. A numerical method for calculation of the value function is proposed. This method is based on Pontryagin's maximum principle. ... A method is proposed for constructing a program optimal control ensuring the near-optimal functional value . ...

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• "Pointwise extra-optimal regularizing algorithms"
• "High-resolution difference schemes of flux calculation and their application

Arushanyan O.B., Volchenskova N.I., Zaletkin S.F. Calculation of expansion coefficients of series in Chebyshev polynomials for a solution to a Cauchy problem // Moscow University Mathematics Bulletin.2012. ... 211-216. ... The solution of such a system and its derivatives are expanded in shifted series in Chebyshev polynomials of the first kind. Algorithms to determine the expansion coefficients are described. ...

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• Goreinov S.A., Tyrtyshnikov E.E. Quasioptimality of Skeleton Approximation of a
• Семенов Е.В., Мортиков Е.В. Задачи оперативного усвоения данных для окраинных
• Approximation of Abstract Differential Equations

Phase errors for adaptive optics systems with one and two correctors under heterogeneous atmosphere conditions. ... Adaptive optics systems with one and two correctors were analyzed. ... Analysis of adaptive optics system with two correctors was carried out using phase screen method. Considered correction algorithm is based on two beacons and allows improving image quality of objects that are disposed at small angles of sight. ...

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• http://ofvp.phys.msu.ru/en/science_education/diploma/annot/2011/Smetanina_Kandidov_en.pdf

... The main interest of researchers was focused on TiO2:Co and TiO2:V thin films, that reveal an essential difference in their behavior: TiO2:Co films demonstrate either strong magnetization, MO response or AHE independently on presence or absence of magnetic Co clusters inside the films. ... It has been found that: thin films TiO2:Co(0.5%, 1.3% and 5%) have either magnetization or MO signal of Transversal Kerr effect with the absence of magnetic clusters. ...

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... Download Russian Journal of Biological Invasions, 2011, issue ? ... The second issue of the Russian Journal of Biological Invasions, 2011, presents 13 articles, in which the questions on introduction and dispersion of alien species in Russian regions and adjacent territories are considered. ... Web-site of Russian Journal of Biological Invasions is developed and supported by the . Group of Bioinformatics and Modeling Biological Processes" IPEE RAS . ... Russian Journal of Biological Invasions . ...

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• Russian Journal of Biological Invasions: 2010, issue ? 3
• Russian Journal of Biological Invasions: 2011, issue ? 1
• Russian Journal of Biological Invasions: 2011, issue ? 3

... I., Kochikov I. V., Spiridonov V. P., Kuramshina G. M., Saakjan A. S. Scaling of Cubic Force Constants in Electron Diffraction Structure Analysis with Application to C 4 H 4 S as a Sample . Abstract The contributions of quantum chemical cubic constants of intramolecular force fields calculated in different approximations are considered with respect to analysis of theoretical electron diffraction intensities. ... Moscow University Chemistry Bulletin . 2001, Vol. ...

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• Moscow University Chemistry Bulletin Vol. 51, No. 5, P. 381 (2010)
• Moscow University Chemistry Bulletin Vol. 47, No. 5, P. 318 (2006)
• Moscow University Chemistry Bulletin Vol. 46, No. 6, P. 411 (2005)

... This information is needed for description of interaction of atom and ion with charge particles and photons. ... The project calculations are based on variational method and wave function expansion in a linear combination of hydrogen - like functions with effective charges. wave function of atoms, wave function of ions, cross section calculations, helium-like, variational method, Hartree - Fock, excited states, ionization, single excitation, double ionization, double excitation . ...

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Heating Process Simulation for a Body Subjected to an Intensive Thermal Effect on Its Surface / Yumashev M.V., Yumasheva M.A., Krasnova P.A. // Vestnik Moskovskogo Universiteta. Seriya 1. Matematika. Mekhanika. ...

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• Vestnik Moskovskogo Universiteta. Seriya 1. Matematika. Mekhanika

The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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... Among them there is forward modeling for uniform anisotropic halfspace to calculate ARS diagrams for different arrays (AM (U), AMN (E), dipole equatorial (D), three-pole (T), Y and Arrow-type (AT) array, etc.), when source of current is on the earth surface or at a depth. All linear arrays (AM, AMN, dipole axial) give anisotropy ellipses with axis ratio equal to anisotropy coefficient, while non-linear arrays (D and others) have this ratio equal to anisotropy coefficient in the 5-th power. ...

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Teaching courses . for student of the Department of Astrophysics and Stellar Astronomy . ... Geophysics and physics of the planets (Kurt, Panteleev) . ... Close Binary Stars . ... Solar Physics . ... This is introductory course for students of the third year of education which are familiar with elementary astronomy and general physics. ... The one-year course includes theory of radiation transfer, theory of internal stellar structure with account of binary systems with compact comapnions. ...

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Atoms as rods and clocks in a gravitational field A.I.Nikishov Leb edev Physical Institute, Moscow 14th Lomonosov Conference. 19-25 August 2009 Abstract We consider the implications of using an atom as a rod and a clock in a constant gravitational field. One consequence of this is that the space metric of any constant gravitational field should be locally isotropic. ... In general this approach agrees with general relativity only in linear approximation and this is quite surprising. ...

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• http://nuclphys.sinp.msu.ru/conf/epp10/Filchenkov.pdf
• http://nuclphys.sinp.msu.ru/conf/lpp14/210809/Teryaev_lom09.pdf
• http://nuclphys.sinp.msu.ru/school/s08/s08_10.pdf

... Distances between sequences . It is considered that the space, where all amino acids and sequences are analysed, is a metric one. ... When the distance between amino acids is entered, it is rather easy to consider such measure as pair distance between sequences in any position of alignment (in fact, this distance is just a distance between two amino acids). As distance is an additional quantity, pair distance between sequences on all alignment positions can be easily defined. ...

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• About authors ot this complex

... Applied Geochemistry , 1999, 14 (2): 95-107. Potential response of forest soils to sulphur deposition in the Norwegian-Russian border area in the surroundings of the Pechenganikel smelters, the major sulphur emitters in the northern Europe, has been assessed with the PROFILE model. The release rate of base cations due to weathering range from 0.05 to 0.28 kmolc/ha/yr in the 0 - 50 cm soil layer, thus demonstrating the high sensitivity of the coarse and thin podzols studied. ...

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• ASSESSMENT OF SOIL SUSTAINABILITY TO ACID DEPOSITION
• Pollution of Soils and Plants by Nickel and Copper
• Koptsik G.N., et al. Soils of the National Park "Russian North".

... Mathematical models and methods in VLSI design . ... General models and statements about the complexity of combinatorial tasks, methods for development of fast algorithms (method of dynamic programming, ?divide and conquer?, ?method of model extension?) are considered. ... Mathematical models of contemporary electronic circuits are considered and basic approaches to solving task of logic synthesis, as well as tasks of VLSI modules placement and interconnection routing are described. ...

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• Mathematical Models of Complex Systems: Theory, Algorithms, Applications |

Электронная библиотека Попечительского совета . ... Becker G.F. - On the Earth Considered as a Heat Engine . ... Название: On the Earth Considered as a Heat Engine . Автор: Becker G.F. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Frank A. Blood - Approximate calculations for the two-dimensional Ising model
• Caforio G., Kummel G. - Military Missions and Their Implications Reconsidered:
• Absurdity of the calculation of the intensity of gravitational radiation in the

... SDPfox - the software package for the prediction of functional specificity groups and amino acid residues that determine the specificity using MPA. ... Amino acid residues that determine differences in protein functional specificity and account for correct recognition of interaction partners, are usually thought to correspond to those positions of a protein multiple alignment, where the distribution of amino acids is closely associated with grouping of proteins by specificity. ...

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• SDPsite - Algorithm Format requirements

... E-MAIL ADDRESS: D.Khmelev@newton.cam.ac.uk . A new statistical method in the analysis of literary style for disputed authorship resolution is considered here. ... Consider a sequence of letter of text as a Markov chain. ... Suppose we take the logarithm of each probability, change a sign, and divide it by the length of control text; then each of the numbers obtained is called the relative empirical entropy . Relative empirical entropy is more convenient for computing than actual probabilities. ...

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• MSU-LGCLL:: Krylov J.K. - On the Nature of Koehler's Effect
• MSU-LGCLL:: Krylov J.K.- Three Laws of Fiction Prosaic Texts Organization

XFDTD . ... XFDTD software is extremely general, with applications including antenna impedance and radiation, scattering, biological effects including SAR, microstrip, electromagnetic compatibility and shielding, and many others. ... Some of the features of XFDTD include; . ... Visualization of fields using color intensity . ... Electromagnetic scattering and RCS Demo versions are available from Home Site below. ... None . ... SAL Home | Other Scientific Fields | Physics Astronomy . ...

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• SAL- Other Scientific Fields - Physics Astronomy
• SAL- Mathematics - Computer Algebra Systems - Interpreter for symbolic
• SAL- Other Scientific Fields - Chemistry, Biology Related - WIEN97