S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• Molecular biology databases

... Государственный Астрономический Институт имени П.К. Штернберга МГУ . ... Семинары ГАИШ . ... Государственный астрономический институт им. П.К.Штернберга (ГАИШ) научно-исследовательский институт, являющийся одним из подразделений МГУ им. М.В. Ломоносова . ... 11 декабря 2006 года исполнилось 175 лет со дня создания на Пресне Астрономической обсерватории Московского университета, ставшей впоследствии базой для формирования Государственного астрономического института им. П.К. Штернберга (ГАИШ МГУ). ...

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This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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• V.A.Baturin - Home Page at Sternberg Astronomy Institute, MSU

Sequence alignment of non-superposable beta-sheets Evgeniy Aksianov Belozersky Institute, Lomonosov Moscow State University, Leninskie Gori 1, Moscow, Russia, evaksianov@gmail.com Andrey V. Alexeevski Belozersky Institute, Lomonosov Moscow State University, Scientific Research Institute for System Studies (NIISI RAN), Moscow, Russia aba@belozersky.msu.ru Protein 3D structures usually are more conserved than their sequences. ... Beta-strands are contained in sheet map rows. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/237.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/59.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/167.pdf

A.N. Belozersky Institute . Bioinformatics Portal . ... Russian EMBnet Node . ... AliBee - Multiple alignment Release 2.0 . ... Grants information . ... Our Institute is a scientific department of Moscow State University. ... Address: Belozersky Institute,Moscow State University,Leninskie Gory 1,Bldg. ... Information about our activities and EMBnet resources around the World is available here . Information about our educational activities with kids, children and teenagers is available here . ...

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• A.N. Belozersky Institute of physico-chemical biology MSU

... Research programm of the laboratory-chair< . ... Laboratory-chair of Discrete mechanics on a microscopic scale . ... Thus the structures of the physical world are not physical objects but physical processes. ... The primitive entity is called a material point. ... The value of the property “existence” of the material point varies from “the material point does not exist” to “the material point exists” by this process. ... Let call this structure a dynamical graph or a d-graph. ...

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• Laboratory-chair of causal mechanics
• Proceedings of the Institute

... Войти в систему . ... Другие названия журнала: J. Optoelectronics Advanced Materials , J. Optoelectronics and Advanced Materials . Издательство: National Institute of Research and Development for Optoelectronics . ... MINAEV V.S. , TIMOSHENKOV S.P. , VASSILIEV V.P. , ALEKSANDROVICH E.V. , KALUGIN V.V., KOROBOVA N.E. в журнале Journal of Optoelectronics and Advanced Materials , издательство National Institute of Research and Development for Optoelectronics (Romania) , том 18, ? ...

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• Science and Technology of Advanced Materials - журнал | ИСТИНА -
• NATO advanced study institutes series. Series A, Life sciences - журнал |
• Mechanics of Advanced Materials and Structures - журнал | ИСТИНА -

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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• SVETKA, a program for multiple sequence alignments analysis
• S : rm_systems
• Example of alignment

... Lathrop R.H., Rogers Jr R.G., Smith T.F. - A Bayes-optimal sequence-structure theory that unifies protein sequence-structure recognition and alignment . ... Название: A Bayes-optimal sequence-structure theory that unifies protein sequence-structure recognition and alignment . Авторы: Lathrop R.H., Rogers Jr R.G., Smith T.F. Аннотация: . A rigorous Bayesian analysis is presented that unifies protein sequence-structure alignment and recognition. ...

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• Adams J.F. - Infinite Loop Spaces - Hermann Weyl Lectures the Institute for
• Ueno K. - Advances in Moduli Theory :: Электронная библиотека попечительского
• Gawronski W.K. - Advanced structural dynamics and active control of structures

Prof. Hui Xia Herbert Gleiter Institute of Nanoscience Hui Xia received his BE and ME in Materials Science and Engineering from University of Science and Technology Beijing. ... He is now an Associate Professor in School of Materials Science and Engineering, Nanjing University of Science and Technology. His research interests include electrode materials for lithium-ion batteries and supercapacitors, fabrication of all-solid-state thin film microbatteries, and new battery technologies. ...

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... V.V.Shevchenko, Sternberg State Astronomical Institute, Moscow University, Universitetsky 13, Moscow 119899, Russia, shev@sai.msu.ru . ... 1.Sternberg State Astronomical Institute, 119899, Moscow, Russia. shev@sai.msu.ru . ... V.V.Shevchenko, Sternberg State Astronomical Institute, Moscow University, Moscow 119992, Russia, shev@sai.msu.ru . ... 119992 Moscow, Russia; . ... 2Sternberg Astronomical Institute, Moscow University, Moscow, 119992, Russia, . ... Moscow, 119992, Russia shev@sai.msu.ru . ...

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• Пугачева Светлана Георгиевна

... optimization of rasmol_homology: keep structure loaded of two sequences only One of steps of this program is superimposition of all sequences with main sequence and saving of all structures to pdb file. ... To implement this optimization methods supeimpose and save_pdb of alignment were replaced with methods with same names of sequence. ... Sequence . ... 9 # Create alignment from sequences . ... 15 # For each sequence, print number of gaps and non-gaps in alignment . ... 19 for column in alignment ...

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• allpy: 835efa2a8c71
• allpy: 78597d31d423
• allpy: fb3164f03984 lib/sequence.py

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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• Align tool for DNA-protein complexes
• Nhunt: program for nucleic acid sequence similarity search
• About

. Advanced Study Institute "Structure and Dynamics of Elementary Matter", . Kemer, Turkey, September 21 - October 2, 2003 . To Hadronic Interactions Laboratory Home Page . To Igor Lokhtin Home Page . Last update: October 3, 2003, Igor Lokhtin

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• History of Strong Interactions Laboratory

... Conferences . ... http://gct.math.nsc.ru/?event=metric-structures-and-control-systems . International Conference METRIC STRUCTURES AND CONTROL SYSTEMS will take place in Sobolev Institute of Mathematics, Novosibirsk, Russia, December, 17 ? ... The conference is organizing by the Laboratory of Geometric Control Theory of the Sobolev Institute of Mathematics (SB RAS) within the framework of the Project ?Geometric Control Theory and Analysis on Metric Structures?. ...

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• Institute of Computer Sciences - Publications
• Institute of Computer Sciences - Conferences
• Institute of Computer Sciences - Staff - Mamaev Ivan Sergeevich

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPsite
• Site Cluster
• SDPsite - PF01205

... American Journal of Physics . ... Applied Optics . Applied Physics Letters . ... Computational Materials Science . ... European Physics Review . ... Journal of Applied Physics . ... Journal of Materials Science Letters . Journal of Materials Science: Materials in Electronics . Journal of Materials Science: Materials in Medicine . ... Journal of Optics A: Pure and Applied Optics . ... Journal of Physics D (Applied Physics) . ... The European Physical Journal - Applied Physics . ...

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• Structure of LanHEP input file
• General structure
• Institutes

... Новости . ... Лаборатории . ... Оценка и экспертиза почв . ... создать лабораторию экологического почвоведения в составе кафедры географии почв. ... Наибольший интерес вызвало последнее занятие, интегрированное в Парад почв, организованный совместно с факультетом почвоведения МГУ. ... С глубоким прискорбием сообщаем о скоропостижной кончине заведующего лабораторией биоразнообразия почв Института экологического почвоведения МГУљчлен-корреспондента РАН, профессора Чернова Ивана Юрьевича. ...

19. http://poly.phys.msu.ru/ru/seminar/vms/29032002/info290302.pdf

20. http://geo.web.ru/conf/alkaline/2009/Asavin2.htm