... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

Еще в разделе: (Показать все результаты (>142) - bioinf.fbb.msu.ru/ )

• SDPlight

... Optimization algorithms for DSMC computations on parallel clusters" . Vashchenkov P.V., Kashkovsky A.V., Ivanov M.S. The paper describes some algorithms of dynamic decomposition of computational domains when solving the problems of rarefied gas dynamics by the DSMC method on parallel computing clusters. ... Keywords: DSMC, parallel computations, clusters, algorithms, load balance . PostScript (in Russian) (1.74MB) . PDF (in Russian) (331KB) . PostScript. zip (in Russian) (378KB) . ...

Еще в разделе: (Показать все результаты (>491) - num-meth.srcc.msu.ru/ )

• "Microarray data analysis with a fuzzy clustering algorithm"
• "The 3D-computer cluster simulation of forming the large-sized one-piece
• "An expandable monitoring system for computing clusters"

... Hoffmann K.- H., Meyer A. (Ed) - Parallel Algorithms and Cluster Computing: Implementations, Algorithms and Applications . ... Название: Parallel Algorithms and Cluster Computing: Implementations, Algorithms and Applications . ... From the science problems to the mathematical algorithms and on to the effective implementation of these algorithms on massively parallel and cluster computers we present state-of-the-art methods and technology as well as exemplary results in these fields. ...

Еще в разделе: (Показать все результаты (>13131) - lib.mexmat.ru/ )

• Campos M.M., Carpenter G.A. - S-TREE: self-organizing trees for data clustering
• Vallath M. - Oracle Real Application Clusters :: Электронная библиотека
• Franke M. - An update algorithm for restricted random walk clusters ::

COMPARISON OF CLUSTERING ALGORITHMS FOR SPEAKER IDENTIFICATION Nikolay Lubimov, Evgeny Mikheev, Alexey Lukin Moscow Lomonosov State University, Moscow, Russia In this paper we consider the problem of text-independent speaker identification that refers to acoustic recognition research. ... We have performed the comparison of different clustering methods for speaker identification: the standard K-means clustering, K-means++, Linde-Buzo-Gray, Fuzzy C-means, and Gustafson-Kessel algorithms. ...

Еще в разделе: (Показать все результаты (>293) - imaging.cmc.msu.ru/ )

. S.I. Kudryashov, J. Kim, N.B. Zorov, S.G. Ionov . Abstracts of the 4th IUMRS International Conference in Asia ( Chiba, Japan, September 16-18, 1997 ) . ABSTRACT . Laser destruction of low-density highly-defective foam graphite foil is considered in connection with laser-induced carbon critical state formation and mass spectroscopic observation of giant carbon cluster ions. Laboratory of Laser Diagnostics

Еще в разделе: (Показать все результаты (>489) - chem.msu.ru/ )

• Moscow University Chemistry Bulletin Vol. 51, No. 5, P. 339 (2010)
• Spinodal decay of labile liquid matter as a new fundamental mechanism of giant
• Electric probe detection of large cluster ions in spinodal decomposition of the

This is very short lesson. ... The reason of this is that dynamic load balancing allows the PC GAMESS/Firefly to use coarser-grained parallel algorithms with much less work duplicated across nodes and typically with much more efficient, optimized memory access patterns. ... To activate dynamic load balancing, just add the following line to your PC GAMESS/Firefly input: . ... Details on the MP2 energy code and p2p interface implementation in the PC GAMESS/Firefly. ...

Еще в разделе: (Показать все результаты (>81) - classic.chem.msu.su/ )

• PC GAMESS v. 7.0.7 benchmarks and scalability on Myrinet Opteron Linux cluster

... The suggested algorithm tries to solve the problem of the detection of hydrophobic clusters corresponding to spatial areas occupied exclusively or mainly by non-polar groups of atoms, in a given 3D structure of protein or macromolecular complex. ... The vertices of each connected component that contains not less than m non-polar groups form a hydrophobic cluster. ... The found hydrophobic clusters, ordered in accordance to the number of non-polar groups, form the output of the algorithm. ... PHE . ...

Еще в разделе: (Показать все результаты (>621) - monkey.belozersky.msu.ru/ )

• Hydrophobic clusters
• About authors ot this complex
• Inquiry information || Distances

BLASTCLUST - BLAST score-based single-linkage clustering. ... BLASTCLUST automatically and systematically clusters protein or DNA sequences based on pairwise matches found using the BLAST algorithm in case of proteins or Mega BLAST algorithm for DNA. ... The primary input format for BLASTCLUST is a FASTA-format sequence file. ... Another type of input is a sequence hit-list previously saved by BLASTCLUST (in this case BLASTCLUST will use pre-computed HSP data instead of making de novo comparisons). ...

Еще в разделе: (Показать все результаты (>579) - kodomo.cmm.msu.ru/ )

• GeneBee service result

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

Еще в разделе: (Показать все результаты (>8) - mouse.genebee.msu.ru/ )

... Supercomputing Technologies in Science, Education and Industry Almanac Series . ... Octoshell: Lightweight and Innovative Cluster Management System . ... Performance System Analysis . ... CLEO: User&Admin-Friendly Cluster Batch System . ... The development of Octoshell system was inspired . by MSU Supercomputing Center administrators . ... The key features of the Octoshell system . ... Center of Moscow State University. ... Research Computing Center (RCC) of Lomonosov Moscow State University . ...

Еще в разделе: (Показать все результаты (>70) - hpc.msu.ru/ )

• CLEO: USER & ADMIN-FRIENDLY CLUSTER BATCH SYSTEM | Moscow University
• AlgoWiki: an Open Encyclopedia of Parallel Algorithmic Features. From Mobile to
• APPLICATIONS: Geophysics | Moscow University Supercomputing Center

PETROTYP has been designed for clustering igneous rock compositions given as concentrations of major element oxides. This program is based on principles of hierarchical grouping of objects that are characterized by an array of parameters described as an objective function (Ward, 1963). The major principle involves a subsequent combining of samples having the minimum geochemical distance (GD) with respect to other rocks or average cluster compositions formed at a previous stage. ...

Еще в разделе: (Показать все результаты (>321) - geo.web.ru/ )

... Shvilkina L.B. , Belega E.D. , Elyutin P.V. , Trubnikov D.N. в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 42, ? ... Lhagva O. , Badamdamdin R. , Strakhova Si , Hehnmedeh L. в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 27, ? ... Balashov V.V. , Grum-Grzhimailo A.N. в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 23, ? ... в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 16, ? ...

Еще в разделе: (Показать все результаты (>1374) - istina.msu.ru/ )

• Journal of Cluster Science - журнал | ИСТИНА - Интеллектуальная Система
• Cluster Computing - журнал | ИСТИНА - Интеллектуальная Система Тематического
• Ipatov A.P. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического

... 2015-Aug-09 03:38:18 . ... 2016-Jan-25 19:48:01 . ... application/octet-stream . ... text/plain . ... text/xml . ...

Еще в разделе: (Показать все результаты (>18861) - mirror.msu.net/ )

• Index of /pub/gentoo-portage/sci-chemistry/cluster/
• Index of /pub/gentoo-portage/sys-cluster/cluster-glue/files/
• Index of /pub/gentoo-portage/sci-chemistry/cluster/files/

... In this article we considerљcalculationљof discrete Laplacian for 1D arrays usingљpython/numpy/scipy. We introduceљthe sparse matrix technique that is rather efficient for computation of certain types of diffusion PDE. ... 1 комментарий " Constructing discrete Laplacian via sparse matrix " . Reaction-diffusion systems in 2D space with python ERG Research Group: Лаборатория теоретической биофизики написал (Январь 26th, 2016 2:13 пп) . ... Constructing discrete Laplacian via sparse matrix . ...

Еще в разделе: (Показать все результаты (>57) - erg.biophys.msu.ru/ )

... wLake 1.7 . wLake is a tool which allows to identify clusters of a structural water molecules in given superimposed 3D structures. Put your coordinates in PDB format into the text area. Select a distance threshold. Two water molecules from different structures will be concidered as located in the same space point if the distance between centers of oxygen atoms is less than this threshold. ... EACH STRUCTURE INCLUDING ITS WATER MOLECULES MUST BE PRESENTED AS SEPARATE MODEL: EXAMPLE. ...

Еще в разделе: (Показать все результаты (>70) - mouse.belozersky.msu.ru/ )

• Cluster 114
• Cluster 12
• Cluster 128

... About lab . ... Online Journal "Computer graphics and multimedia" (in russian) . ... Audio Bandwidth Extension using Cluster Weighted Modeling of Spectral Envelopes . ... 127th Audio Engineering Society Convention . ...

Еще в разделе: (Показать все результаты (>324) - graphics.cs.msu.ru/ )

... Collaborative Research Center for Cluster Ion Beam Process Technology . ...

Еще в разделе: (Показать все результаты (>95) - danp.sinp.msu.ru/ )

... 4) Percolation probability: [pic] , where L is linear size of lattice. ... The presence of obstacles in a system leads to: - increase of the critical concentration value; this effect grows with increase of the full area of obstacles and falls with increase of the linear size of ones. - increase of the critical exponent ( value; this effect increase with growth both of linear size of obstacles and of their full area. - increase of the growth rate of ...

Еще в разделе: (Показать все результаты (>67) - acat02.sinp.msu.ru/ )

... The main interest of researchers was focused on TiO2:Co and TiO2:V thin films, that reveal an essential difference in their behavior: TiO2:Co films demonstrate either strong magnetization, MO response or AHE independently on presence or absence of magnetic Co clusters inside the films. ... It has been found that: thin films TiO2:Co(0.5%, 1.3% and 5%) have either magnetization or MO signal of Transversal Kerr effect with the absence of magnetic clusters. ...

Еще в разделе: (Показать все результаты (>9) - magn.phys.msu.ru/ )

... Moskovsky Alexander . ... Rogov Alexander . Modeling the reaction of hydrolysis of peptide bonds by trypsin by using quntum mechanical - molecular mechanical methods . ... Title: "Modeling Spectra of Molecular Clusters by Quantum Chemistry and Molecular Dynamics Methods" . ... Title: "Development of the Combined Quantum Mechanical - Molecular Mechanical Methods" . ... Title: "Modeling mechanisms of enzymatic hydrolysis reactions by the combined quantum mechanical - molecular mechanical methods" . ...

Еще в разделе: (Показать все результаты (>17) - lcc.chem.msu.ru/ )

• People