Histone-like proteins from archaea beta-Glucosyltransferase (DNA-modifying) C-terminal domain of RNA polymerase alpha subunit CAP C-terminal domain -like DNA repair glycosylase, 2 C-terminal domains DNA repair protein MutS, domain I DNA- binding protein LAG-1 (CSL) DNA- binding protein LAG-1 (CSL) Endonuclease III Group I mobile intron endonuclease Intein ( protein splicing ... TATA-box binding protein (TBP), C-terminal domain . ... 116-198 . ... 12-115 . ... Protein domain: . ...

Еще в разделе: (Показать все результаты (>6278) - monkey.belozersky.msu.ru/ )

• PDB entries containing domains of the family "STAT protein, DNA binding domain"
• PDB entries containing domains of the family "Telomere-binding protein alpha
• PDB entries containing domains of the family "Centromere binding protein B, DNA

list of Eubacteria domains composed the orthologuos groups of the set 1 Pfam AC Pfam ID Description PF00035 dsrm Double-stranded RNA binding motif PF00113 Enolase_C Enolase, C-terminal TIM barrel domain PF00119 ATP-synt_A ATP synthase A chain PF00162 PGK Phosphoglycerate kinase PF00164 Ribosomal _S12 Ribosomal protein S12 PF00177 Ribosomal _S7 Ribosomal protein S7p/S5e PF00181 Ribosomal _L2 Ribosomal Proteins L2, ...

Еще в разделе: (Показать все результаты (>19) - mouse.genebee.msu.ru/ )

• http://mouse.genebee.msu.ru/phylogeny/Domains_sets2-4.doc
• Comparison of protein phylogeny reconstruction methods

. The work is supported by the Russian Foundation for Basic Research, grant 10-07-00685-a . PDB . Classification . Domain instances . Bonded with NA . 1B01 . GENE REGULATION/DNA . 2 . 2 . 1EA4 . GENE REGULATION/DNA . 10 . 10 . 2HZV . METAL BINDING PROTEIN/DNA . 8 . 8 . total (3 entries) . 20 . 20 . No comments on this family . Send your questions and comments to sas@belozersky.msu.ru .

Еще в разделе: (Показать все результаты (>10384) - mouse.belozersky.msu.ru/ )

• Cluster 27
• Cluster 110

Ill.1 The Protein DNA gyrase subunit b (ec 5.99.1.3) . ... There are 8 known domain architectures (21 different proteins [see *] ) were the domain is duplicated. * 1 protein with HisKA , HATPase_c , Response_reg , HisKA , HATPase_c , Response_reg architecture - Q95PI1_DICDI [ dictyostelium discoideum (slime mold)] double histidine kinase dhkd, 1 protein with 7TMR-DISM_7TM, HisKA , HATPase_c , Response_reg , His_ kinase , HATPase_c ...

Еще в разделе: (Показать все результаты (>3583) - kodomo.cmm.msu.ru/ )

• Student's numbers
• InterPro
• SCOP и CATH

... Interaction classes . Families of interaction class . Classes of protein-DNA interaction of SCOP families . ... CAP C-terminal domain-like . SSM . middle . ... high . ... KorB DNA-binding domain-like . ... Restriction endonuclease BglII . ... Middle domain of MutM-like DNA repair proteins . ... DNA-binding N-terminal domain of transcription activators . ... Recombinase DNA-binding domain . ... Viral DNA-binding domain . ... p53 DNA-binding domain-like . ... NPIDB team 2003 - 2016 . ...

Еще в разделе: (Показать все результаты (>16) - npidb.belozersky.msu.ru/ )

• NPIDB: Home

cAMP-induced conformational changes of Protein Kinase A I A-domain O. N. Rogacheva, V. E. Stefanov St. Petersburg State University, Universitetskaya nab. ... In the end, we presented the conformational transition of the A-domain in the form of a partly deterministic sequence of six events: 1) B 2) C1, D1, 3) E, 4) C2[D2], F, 5) G. The sequence of the items of this scheme corresponds to the process of the conformational transition in time. ...

Еще в разделе: (Показать все результаты (>227) - mccmb.belozersky.msu.ru/ )

• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/109.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/126.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/126.pdf

Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Войти в систему . ... Bogacheva E.N. , Dolgov A.A. , Chulichkov A.L. , Shishkov A.V. , Ksenofontov A.L. , Fedorova N.V. , Baratova L.A. в журнале Russian Journal of Bioorganic Chemistry , издательство Maik Nauka/Interperiodica Publishing (Russian Federation) , том 38, ? ...

Еще в разделе: (Показать все результаты (>1752) - istina.msu.ru/ )

• Calcium Binding Proteins - журнал | ИСТИНА - Интеллектуальная Система
• Journal of protein chemistry - журнал | ИСТИНА - Интеллектуальная Система
• Bukach OV - сотрудник | ИСТИНА - Интеллектуальная Система Тематического

Электронная библиотека Попечительского совета . ... McFadden G., Moyer R. - Poxvirus Secreted Chemokine-binding Proteins . ... Название: Poxvirus Secreted Chemokine-binding Proteins . Авторы: McFadden G., Moyer R. Аннотация: . ... Currently, two classes of chemokine-binding proteins have been described which interact with chemokines in different fashion. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

Еще в разделе: (Показать все результаты (>3738) - lib.mexmat.ru/ )

• Fersht A. - Structure and Mechanism in Protein Science :: Электронная
• Lesk A.M. - Introduction to Protein Architecture :: Электронная библиотека
• Vogel H.J. (ed.) - Calcium-Binding Protein Protocols: Reviews and Case Studies

... 101 (FDH_PSESR, P33160) (PF00389; 2-Hacid_dh) (PF02826; 2-Hacid_dh_C): 2-Hacid_dh 47-144; 2-Hacid_dh_C 150-332 Lineage: Root: scop Class: Alpha and beta proteins (a/b) Mainly parallel beta sheets ( beta - alpha - beta units) Fold: NAD(P)-binding Rossmann-fold domains core: 3 layers, a/b/a; parallel beta -sheet of 6 strands, order 321456 The nucleotide-binding modes of this and the next two folds/superfamilies are similar Superfamily ...

Еще в разделе: (Показать все результаты (>17861) - dualopt1.cmm.msu.ru/ )

... The role of intrinsically disordered regions in the structure and functioning of small heat shock proteins. ... Curr Protein Pept Sci. ... Small heat shock proteins (sHsp) form a large ubiquitous family of proteins expressed in all phyla of living organisms. ... Thus, disordered N- and C-terminal sequences play important role in the structure, regulation and functioning of sHsp. ...

Еще в разделе: (Показать все результаты (>133) - biochem.bio.msu.ru/ )

• Three-dimensional structure of alpha-crystallin domain dimers of human small
• A protein whose binding to Na,K-ATPase is regulated by ouabain.
• [Heart fatty acid binding protein in patients hospitalized because of worsening

... file . ... file log . ... add util pfamdomains2fasta pfamdomains2fasta converts input XML file with Pfam domains to fasta files (input of pair-cores), one fasta file per domain. author . ... 1 import base . 2 import data.codes . ... 4 import protein . ... 6 class Monomer ( base . ... 8 type = 'protein' . 9 types = protein . ... 15 class Protein ( list ): . ... 19 class Sequence ( base . ... 22 class Column ( base . ... 25 class Alignment ( base . ... 28 class Block ( Alignment , base . ...

Еще в разделе: (Показать все результаты (>17713) - kodomo.fbb.msu.ru/ )

• SCOP и CATH - учебный сайт Смирновой Виктории
• allpy: allpy/protein.py diff
• Исследование ДНК-белковых взаимодействий - учебный сайт Смирновой Виктории

... Miklukho-Maklaya, 16/10 Voltage sensitive Na+-channels (Navs) are integral membrane proteins that selectively control flow of Na+ ions and participate in the generation and propagation of action potentials in excitable cells. Thus, Navs serve as one of the primary targets for various animal neurotoxins, such as scorpion toxins, binding of which alters the membrane potential and the channel activity. ...

Еще в разделе: (Показать все результаты (>66) - www.mce.biophys.msu.ru/ )

• http://www.mce.biophys.msu.ru/archive/doc98249/eng.pdf

... Department of Chemical Enzymology, School of Chemistry, Lomonosov Moscow State University, Moscow, 119899, Russia. ... The mapping of the fragments was done using a model structure of horseradish peroxidase. Five of six structurally similar fragments belong to the distal domain and form a subdomain in plant peroxidases that includes the distal heme-coordinating sequence, LHFHDC (amino acid residues 39-44 in horseradish peroxidase). ...

Еще в разделе: (Показать все результаты (>136) - www.enzyme.chem.msu.ru/ )

• Article

Computation of contribution from the cavity effect to protein-ligand binding free energy" . Grigoriev F.V., Jabin S.N., Romanov A.N., Sulimov V.B. Some results of the study of the cavitation effect, which provides an essential part of hydrophobic interactions due to the formation of protein-ligand complexes, are discussed. ... The main contribution to the cavitation effect is due to the annihilation of the cavity of the ligand. ... PostScript (in Russian) (14.1MB) . PDF (in Russian) (697KB) . ...

Еще в разделе: (Показать все результаты (>115) - num-meth.srcc.msu.ru/ )

• Domain decomposition based on a direct method for solving the three-dimensional
• "Generation of octree meshes with cut cells in multiple material domains"
• "Construction of stability domains for explicit Runge-Kutta methods"

PHP Manual . Prev . Next . 3.0.7 - 3.0.18 only, PHP 4 >= 4.0.0) yp_get_default_domain -- Fetches the machine's default NIS domain . int yp_get_default_domain ( (void);) . yp_get_default_domain() returns the default domain of the node or FALSE . ... Every host that needs to look up information binds itself to a certain domain. ... Example 1. Example for the default domain . php $domain = yp_get_default_domain(); echo "Default NIS domain is: " . domain; ?> ...

Еще в разделе: (Показать все результаты (>153) - oit.cmc.msu.ru/ )

• bind_textdomain_codeset
• Joining an NT Domain with Samba 2.0
• yp_errno

Project Leader: Pavel P. PHILIPPOV , Dr. of Science (Biolology), Professor of Biochemistry, Head of the Department of Enzymology, A.N.Belozersky Institute of Physico-Chemical Biology, Moscow State University. ... Antoch M.P., Lukjanov K.A., Philippov P.P. (1989) FEBS Lett. ... Identification of rhodopsin kinase as the recoverin intracellular target [Gorodovikova E.N., Philippov P.P (1993) FEBS Lett. ... 1994) FEBS Lett. 349, 187-190; Gorodovikova E.N., Senin I.I., Philippov P.P (1994) FEBS Lett. ...

Еще в разделе: (Показать все результаты (>198) - www.genebee.msu.ru/ )

• Лаборатория регуляции белкового синтеза
• INTAS :: Global and Local Protein Matching
• Databases

... In vitro, the protein S7 of Thermus thermophilus is able to form complexes with both the minimal 16S rRNA fragment and the intercistronic region of the str operon mRNA from E.coli (Kd = 1.4x10-7 M and 1.1x10-7 M respectively). ... The filter binding assay. ... The most striking result of our study is that thermophilic protein S7 binds strongly to the E.coli S12-S7 intercistronic region of str mRNA in vitro, inspite of the lack of the functionally analogous thermophilic extended region. ...

Еще в разделе: (Показать все результаты (>7) - rnp-group.genebee.msu.ru/ )

• http://rnp-group.genebee.msu.ru/pages/pdf/nar2004.pdf
• http://rnp-group.genebee.msu.su/pdfs/article_vas_bioelectro.pdf

... Prot-DNA-Korr is a tool for studying sequence correlations between DNA-binding proteins and their binding sites. The program searches for such pairs of positions in alignments of proteins and their binding sites that demonstrate correlations between amino acid residues and bases. ... One only needs two alignments with the same number of elements: one of proteins and one of their respective binding sites. ...

Еще в разделе: (Показать все результаты (>134) - bioinf.fbb.msu.ru/ )

• User's guide

f90gl . f90gl is a public domain implementation of the official Fortran 90 bindings for OpenGL. It provides both fortran 77 and fortran 90 interfaces. ... http://math.nist.gov/f90gl/ . Source Code Availability: Yes, ftp://math.nist.gov/pub/mitchell/f90gl . ... OpenGL or Mesa, Fortran 90 compiler (Fortran 77 interface can be built without F90), GLUT. ... ftp://math.nist.gov/pub/mitchell/f90gl (FTP site) . ... SAL Home | Programming | GL/OpenGL Related Libraries Toolkits . ...

Еще в разделе: (Показать все результаты (>360) - www.sai.msu.su/ )

• SAL- Other Scientific Fields - Chemistry, Biology Related - DomainFinder
• SAL- Programming - Other Graphic Libraries - GOOD
• SAL- Other Scientific Fields - Chemistry, Biology Related - SCORE

... Изучение белок-белковых взаимодействий. Метод двойного гибрида . ... The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest. ... Screening for in vivo protein-protein interactions. ... A novel genetic system to detect protein-protein interactions. ... Aberrant protein phosphorylation at tyrosine is responsible for the growth-inhibitory action of рр 60 expressed in the yeast Saccharomyces cerevisiae. ...

Еще в разделе: (Показать все результаты (>290) - www.nature.web.ru/ )

• Механизмы нуклеоцитоплазматического транспорта
• Инициация трансляции у эукариот