... 14, 1272-1280, 1993 2KAE REM F.Eisenhaber et al., ... 2KAE ASG SER A 111 1 C Coil 360.00 146.23 124.6 2KAE ASG PHE A 112 2 C Coil -127.43 -106.30 144.9 2KAE ASG GLN A 113 3 C Coil 174.29 157.70 78.9 2KAE ASG CYS A 114 4 T Turn -84.50 171.61 8.7 2KAE ASG SER A 115 5 T Turn -106.30 22.50 65.9 2KAE ASG ASN A 116 6 T Turn -159.86 -41.39 112.7 2KAE ASG CYS A 117 7 T Turn -90.59 -73.40 54.4 2KAE ...

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• http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/3qmi.std.txt
• http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/3qmh.std.txt
• http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/4nw3.std.txt

... day commit -- a lot of changes fasta.py: universal save_fasta() determine_long_line -- for determine length of fasta sequence string in user input everywhere: standart long_line=60 -- 70 blocK.sequences_chains: returns sequences in order as in project added monomer pdb_secstr to store secondary structure pdb adding: some improvements and fixes fix in from_pdb_ chain : use all peptides, not only first Sequence .pdb_files added to store information about pdb file for each ... monomers = monomers...

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• allpy: 9adbec7c3366 lib/sequence.py
• allpy: 12b97ab5cdc7 allpy/sequence.py
• allpy: 40c086a41ca0 allpy/sequence.py

This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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• Not so well documented Device Helpers in OS/2

... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Screening of pattern or alignment against PROTEIN databank
• Screening protein sequence against PROSITE databank

. H1 R3-A26 H2 I34-V54 H3 V54-G59 H4 N63-G73 H5 K79-S104 H6 D110-G115 H7 Y121-S125 H8 S130-D154 H9 F161-N182 H10 N186-G198 H11 G199-L205 H12 W206-T225 . H1, H2, ... ? альфа-спирали (helixes); . Черные линии ? обычные участки цепи; . Синии линии ? повороты (turns).

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• Azor_Ecoli.entered
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The database of RNA secondary structure elements E.F. Baulin, Institute of Mathematical Problems in Biology, Pushchino, Russia, Higher Schoo l of Economics, Moscow, Russia ... Russia, Higher Schoo l of Economics, Moscow, Russia, mroytberg@lpm.org.ru We propose a new definition of the loop, which on the one hand is a generalization of the definition of Mathews-Turner [1], and on the other hand allows to divide into loops an arbitrary secondary ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/134.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/91.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/101.pdf

Электронная библиотека Попечительского совета . ... Billinge S.J.L., Thorpe M.F. - Local structure from diffraction . ... Название: Local structure from diffraction . Авторы: Billinge S.J.L., Thorpe M.F. Аннотация: . This workshop on Local Structure from Diffraction was organized to bring together . leading researchers studying local structure using diffraction techniques. ... Bragg diffraction 158 . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Peters C.A., Steenbrink J.H. - Mixed Hodge Structures :: Электронная библиотека
• Kletzing D. - Structure and Representations of Q-Groups :: Электронная
• Cox H.L. - The Design of Structures of Least Weight :: Электронная библиотека

For vi , a line is the string of characters between two <RETURN> characters. Although vi will automatically wrap the text onto a new line when it reaches the right-hand side of the screen, it does not insert a <RETURN> character. ... Adding a <RETURN> at the end of every line ensures that the appearance of the text on your screen corresponds to vi 's understanding of how text is structured. Setting the wrapmargin option automatically inserts a <RETURN> character whenever vi wraps text. ...

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A program for alignment of structures of DNA-protein complexes . ... Help . ... StructAlign is a program for alignment of DNA-protein complexes' structures. The program gets a pair of complexes of DNA double helix with proteins in PDB-format and optionaly names of protein chains and outputs an alignment of DNA chains corresponding to the best spatial fit of protein chains also in PDB-format. ... X-axis is directed from P atom to C1' atom. ...

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• Align tool for DNA-protein complexes

... MCAL_SATURDAY For recurrence : . ... mcal_event_set_category -- Sets the category of the streams global event structure . ... mcal_event_set_recur_none -- Sets the recurrence of the streams global event structure . mcal_event_set_recur_daily -- Sets the recurrence of the streams global event structure . mcal_event_set_recur_weekly -- Sets the recurrence of the streams global event structure . mcal_event_set_recur_monthly_mday -- Sets the recurrence of the streams global event structure . ...

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... This family contains a protein with resolved 3D structure: Q9X1V5_THEMA/22-105 , pdb ID: 1p8c . SDPsite predicts following important positions (numbering corresponds to 1p8c ): . ... Associated grouping: . Group 1 . ... Q978P3_THEVO/22-105 . Q9HLI4_THEAC/22-105 . ... Q9X1V5_THEMA/22-105 . ... YAC7_ALCEU/24-107 . ... Y1053_HAEIN/24-107 . Q8GQ78_PSEAE/24-107 . ... Q89PM8_BRAJA/34-118 . ... Q8E1D2_STRA5/17-102 . ... DC4C_ACIAD/35-119 . ... Q8NUW4_STAAW/10-92 . ... Q7VW83_BORPE/12-94 . ...

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• SDPsite - PF04076
• SDPsite - PF07883
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Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Войти в систему . ... Ying-Gang Lu , Turner Stuart , Ekimov E.A. , Verbeeck Jo , Van Tendeloo Gustaaf . ... 205 Felix V.Kaminsky , Ryabchikov Igor D. , McCammon Catherine A. , Micaela Longo , Abakumov Artem M. , Stuart Turner , Hamed Heidari . ...

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• Proteins: Structure, Function and Bioinformatics - журнал | ИСТИНА -
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The user phase space function has a prototype . double usrfun(char * name) . ... is called for the user input of the structure function parameters just after the particular structure function is chosen. ... In the simplest case, if the user would like to implement a new structure function without singularity and extra parameters, he may take a copy of the $COMPHEP/c_source/num/strfun/sf_prv.c file, improve p_prv so that it returns in any case, and rewrite the originally trivial c_prv function. ...

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• Fortran case
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Next: msgtool: An interactive message Up: 6.4.2 Message Queues Previous: SYSTEM CALL: msgsnd() . ... Now, we will turn the discussion to directly manipulating the internal structures associated with a given message queue. To perform control operations on a message queue, you use the msgctl() system call. ... Sets the value of the ipc_perm member of the msqid_ds structure for a queue. ... We retrieve a current copy of the internal data structure by a quick call to our get_queue_ds wrapper function. ...

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• SYSTEM CALL: shmget()
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RNA Tertiary Structure Modelling . ... Two steps to fold coarse-grained model of RNA tertiary structure . ... fill in RNA secondary structure form with CT format (also with pseudoknots); . ... push "Finish Step #1" button to obtain secondary and intermediate* structures. * intermediate structure is the structure with minimum of "free energy" contains formed helixes and stacking, but without tertiary interactions . RNA secondary structure form . ... some useful RNA secondary structure databases: . ...

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... История кафедры . ... младших курсов . ... Уважаемые студенты 1-го, 2-го и 3-го курсов! ... Семинар кафедры проходит по пятницам в 15.20 в комн. ... а также на стендах кафедры на 2-м и 4-м этажах. Информацию о более ранних событиях см. в разделе "Жизнь кафедры" . ... 119991, Москва, Ленинские горы, д.1, стр.2, МГУ имени М.В.Ломоносова, физический факультет, кафедра фотоники и физики микроволн . ...

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. Home . Structure of Data . Description . Catalog . Publications . VO . ЮБ 2000 . 19:06:52.8 . ЮД 2000 . +13:14:44 . l . 46.468 . b . 2.645 . diameter . 4.0' . (m - M) 0 . 11.56 0.41 . distance . 2050 430 pc . E(B - V) . 0.98 0.12 . log(t) . 9.1 0.05 . (J, J-H) isochrone VOTable . 2MASS data VOTable . IPHAS IDR data VOTable . Developed by the Team . Send us your questions or feedback

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This is an implementation of RD-tree data structure using GiST interface of PostgreSQL. ... desc') - sort intarray test =# select sort ('{1,2,3}':: int [],'desc'); sort --------- {3,2,1} (1 row) int [] sort ( int []) - sort in ascending order int [] sort _asc( int []), sort _desc( int []) - shortcuts for sort int [] uniq( int []) - returns unique elements test =# select uniq( sort ('{1,2,3,2,1}':: int [])); uniq --------- {1,2,3} (1 row) int idx( ...

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• SAL- Other Scientific Fields - Chemistry, Biology Related - Protein Structure
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Home . Database of structures of nucleic acid - protein complexes . ... List of complexes . Pfam families . SCOP families . Interaction classes . ... NPIDB . ... Information on SCOP and Pfam domains detected in protein chains is presented. ... Each family has its own web page with the list of entries that include domains of the family. ... List of SCOP domains occurred in DNA-protein and RNA-protein complexes is organized in tree-like form, according to the SCOP classification. ...

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... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Developer Documentation . ... In general, a hook function is one that Apache will call at some point during the processing of a request. ... Use the AP_DECLARE_HOOK macro, which needs to be given the return type of the hook function, the name of the hook, and the arguments. For example, if the hook returns an int and takes a request_rec * and an int and is called do_something , then declare it like this: . ...

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