... The approach for estimation of the homology search program sensitivity in nucleotide case was proposed in paper I.Anderson, A.Brass , "Searching DNA databases for similarities to DNA sequences: when is a match significant?" ... Seven sequences were chosen to have length varying from 100 to 1000 bp. ... Each of the 1000 artificially evolved sequences was used as a query for database search with Genebee search, blast-2.0.8 and fasta-3.3 as search engine. ... Sequence length . ... 100 . ... Blast 2.0 ....

Еще в разделе: (Показать все результаты (>278) - www.genebee.msu.ru/ )

• BLAST Basic Overview
• Selected Scientific Journals - Search Engines
• BLAST Frequently Asked Questions (FAQ)

... Query: E. coli K12 tRNA (valV, selC, asnV, leuT, argZ from EMBL entry U00096 ) . ... BLASTN (both) | ... Nhunt . ... BLASTN (optimal): 3.5 s . BLASTN (default): 0.8 s . ... Nhunt: 7 s The program Nhunt surpass all other tested programs in sensitivity. ... Nhunt BLASTN (optimal): 2.9 s . ... Nhunt: 3.7 s BLASTN with default parameters actually cannot find any significant homologues. ... Nhunt-3: 1.7 s BLASTN with default parameters actually cann't find any significant homologues. ...

Еще в разделе: (Показать все результаты (>34) - mouse.genebee.msu.ru/ )

• ConClus
• Nhunt

Full-Text Search in PostgreSQL: A Gentle Introduction . ... Full-Text Search ( FTS ) is a search for the documents, which satisfy query and, optionally, return them in some order . ... Moreover, modern information systems are all database driven and there is a need in IR (Information Retrieval) style full text search inside database with full conformance to the database principles ( ACID ). ... Search machines parse text files and store associations of lexemes (words) with their parent document. ...

Еще в разделе: (Показать все результаты (>10213) - www.sai.msu.su/ )

• SAL- Other Scientific Fields - Chemistry, Biology Related - HMMER
• Sternberg Astronomical Institute
• A Brief History of FTS in PostgreSQL

You can search database for submitted information. ... Character * specifies arbitrary character sequence (eg. '*n' will result: John, Martin etc.) Character * is placed at end of line automatically ('Mar*' = 'Mar' will result: Martin, Martina etc.) Blank form will result ALL database records. ... Family name: . ... Topic: . ... Seismo-tectonics of Tsunami 3. Numerical and Analytical Models of Local Tsunami Behavior 4. ... Recent Local Tsunamis 8. ... Information . ... Database search . ...

Еще в разделе: (Показать все результаты (>32) - seac47-2.phys.msu.ru/ )

Электронная библиотека Попечительского совета . ... Korf I., Yandell M., Bedell J. - Blast (Basic Local Alignment Search Tool) . ... Название: Blast (Basic Local Alignment Search Tool) . Авторы: Korf I., Yandell M., Bedell J. Аннотация: . ... BLAST (Basic Local Alignment Search Tool), is a sophisticated software package for rapid searching of nucleotide and protein databases. ... BLAST is the only book completely devoted to this popular suite of tools. ... BLAST basics and the NCBI web interface . ...

Еще в разделе: (Показать все результаты (>113484) - lib.mexmat.ru/ )

• Mehlhorn K. - Data structures and algorithms 3: multi-dimensional searching and
• Spink A., Jansen B.J. - Web Search: Public Searching on the Web :: Электронная
• Mehlhorn K. - Data Structures and Algorithms (vol. 1 Sorting and Searching) ::

... The objects on the surface may be searched and then enumerated using the Command Enum Features . ... The average level, mean square deflection (in fig d) and maximum value are calculated for the surface. ... The new average level of the height of the surface is found when the selected objects are not accounted for. Then the average height of each selected objects is calculated as the average value among maximum values of the height for each line along X axis in respect to the new average level. ...

Еще в разделе: (Показать все результаты (>131) - www.spm.genebee.msu.ru/ )

Home . Database of structures of nucleic acid - protein complexes . ... List of complexes . Pfam families . SCOP families . Interaction classes . ... NPIDB . ... Information on SCOP and Pfam domains detected in protein chains is presented. ... Each family has its own web page with the list of entries that include domains of the family. ... List of SCOP domains occurred in DNA-protein and RNA-protein complexes is organized in tree-like form, according to the SCOP classification. ...

Еще в разделе: (Показать все результаты (>10) - npidb.belozersky.msu.ru/ )

• NPIDB: List of complexes

... BLAST databases . RPSBLAST databases Search utilities . bl2seq - given two sequences in FASTA format, find regions of local similarity . blastall - given sequences in FASTA format, find similar sequences in a BLAST database . ... formatdb - create BLAST databases from FASTA sequences Advanced utilities . ... rpsblast - search an RPSBLAST database using the BLAST algorithm . ... BLAST database - A set of protein or nucleotide sequences in a format suitable for efficient searching. ...

Еще в разделе: (Показать все результаты (>9412) - kodomo.cmm.msu.ru/ )

• http://kodomo.cmm.msu.ru/~plazmoliz/Term3/sup/cds_result.txt
• http://kodomo.cmm.msu.ru/~plazmoliz/Term3/sup/all_blastn.txt
• http://kodomo.cmm.msu.ru/~plazmoliz/Term3/sup/pyr_D.txt

S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

Еще в разделе: (Показать все результаты (>6355) - monkey.belozersky.msu.ru/ )

• About COGs
• About this project

... LDAP is the Lightweight Directory Access Protocol, and is a protocol used to access "Directory Servers". ... Search surname entry $sr= ldap _ search ($ds, o=My Company, c=US , sn=S* ); echo Search result is .$sr. p ; echo Number of entires returned is . ldap _count_ entries ($ds,$sr). p ; echo Getting entries ... p ; $info = ldap _ get _ entries ($ds, $sr); ... ldap_get_attributes -- Get attributes from a search result entry . ... ldap_get_entries -- Get all result entries...

Еще в разделе: (Показать все результаты (>727) - oit.cmc.msu.ru/ )

• notes_search
• udm_set_agent_param
• ldap_search

Databases (NSDC) of the Natural Planetary Satellites. ... NSDC: Database of astrometric observations of Natural Planetary Satellites . ... They are thoroughly looking for observations in different sources, creating their owndatabases which are then mostly inaccessible to other researchers. ... In the file "content" with explications, the reference is given to the data source as well as the bibliographic reference. ... Data sources. ... Why a specific bibliographic database for Natural satellites? ...

Еще в разделе: (Показать все результаты (>328) - lnfm1.sai.msu.ru/ )

The Chair of Mathematical Theory of Intelligent Systems and . Laboratory of Problems of Theoretical Cybernetics . ... MaTIS Chair . ... Research . ... Computer Solver . ... development of computer teaching systems . Information Monitoring . creating the systems of information monitoring . Search in Databases . systems of fast search in extensive databases . ... The Chair of Mathematical Theory of Intelligent Systems, Laboratory of Problems of Theoretical Cybernetics . ...

Еще в разделе: (Показать все результаты (>138) - www.intsys.msu.ru/ )

• Интеллектуальные системы :: Сотрудники :: Гасанов Эльяр Эльдарович :: Instantly
• Intelligent Systems :: Research
• Intelligent Systems :: Staff :: Gasanov Elyar Eldarovich

The development of the method for the analysis of proteomics data Dmitry S. Ischenko, V. Popkov Moscow Institute of Physics and Technology, Dolgoprudny, Russia, ischenko.dmitry@gmail.com Dmitry G. Alexeev Scientific-Research Institute of Physicochemical medicine, Moscow, Russia, exappeal@gmail.com In the analysis of mass spectrometry data of unannotated sample the problem is in an adequate evaluation of the results. The question is: what to choose as a protein database for searching? ...

Еще в разделе: (Показать все результаты (>353) - mccmb.belozersky.msu.ru/ )

• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/36.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/228.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/49.pdf

Online Services | ... Research) IPN(Institute Physics Nuclear, Paris) ISN(Institute Science Nuclear, Grenoble) JINR(Joint Institute Nuclear Research) JUL-Spez(Institute fur Kernphysik) JYFL(University Jyvaskyla, Finland) LA(Los Alamos Science Laboratory) LBL(Lawrence Berkeley Laboratory) NEANDC(Nuclear Data Committee) ORNL(Oak Ridge National Laboratory) UTTAC(University Tsukuba Center) ZFK(Zentralinstitut fur Kernforschung) **************************************************** Other Code . ... Code: . ...

Еще в разделе: (Показать все результаты (>4923) - cdfe.sinp.msu.ru/ )

• CDFE => Online Services => Nucleus Ground State Parameters
• CDFE provides the major photonuclear databases. Online Services.
• CDFE => Online Services

... Пользователи -General- Common Current University Society Study Diaspora FAQ Real Estate -Technical- Development Hard&Soft Network Mobile -Market- Market Services Job -Hobby- Behemoth Health Love&Sex Еда Media Games Auto&Moto Sport Hobby Flood Zone -Servant- Alternative Forums Forum -Garbage- Revolution Garbage Private . ... Chemists, Attention! Search on databases! ... Search on databases! [ re: olenka_chem ] . ... Search on databases! [ re: egoist ] . ... Из: IT UK CH . ...

Еще в разделе: (Показать все результаты (>6853) - www.fds-net.ru/ )

• Searching for Андрей Халявин - Public forum of MSU united student networks
• Аналитик Executive Search - Public forum of MSU united student networks
• searching for caretaker for my cat - Public forum of MSU united student...

What would you like to search for? ... Case sensitive Match whole word Recent publications first . ... What to do if you are looking for ... words iron and oxide in the same record: iron and oxide . both these words or chemical formulae: (iron and oxide) or Fe2O3 . ... That's why do not use Co instead of cobalt : you will find Co even in al co hol! ... The hidden part of the database allows you to use full names of chemical elements instead of the short ones (like nickel instead of Ni ). ...

Еще в разделе: (Показать все результаты (>4) - scon155.phys.msu.ru/ )

• Database: publications on x-ray absorption spectroscopy

... Workload balancing in GPU implementation of breadth-first search" . Chernoskutov M.A., Ermakov D.G. Parallel processing of unstructured data єѓ¶Иє®¶Г¶В in a graph-like form can be a severe computational challenge because of significant overheads caused by the irregular nature of graph algorithms and the hardware latency of intensive data access. ... Keywords: breadth-first search, parallel algorithm, graphics processing units . PDF (in Russian) (315KB) . PDF. zip (in Russian) (275KB) . ...

Еще в разделе: (Показать все результаты (>408) - num-meth.srcc.msu.ru/ )

• "Performance evaluation of breadth-first search on Intel Xeon Phi"
• Problems of search for collisions of cryptographic hash functions of the MD
• Implementation of a parallel algorithm for searching the global extremum of a

... Sbjct : 9135 ctggc 9131 Database : thr Posted date: Feb 20, 2008 8:14 PM Number of letters in database : 12,243,887 Number of sequences in database : 884 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences : 884 Number of Hits to DB: 142,083 Number of extensions: 8872 Number of successful extensions: 67 Number of ...

Еще в разделе: (Показать все результаты (>41883) - kodomo.fbb.msu.ru/ )

• http://kodomo.fbb.msu.ru/~element/Term3/pm.txt
• http://kodomo.fbb.msu.ru/~ogion/projects/Evolution_of_sequences/hemn_yp.blast
• http://kodomo.fbb.msu.ru/~smivic/Projects/Term_3/Downloads/gluq_pm.blast

... 32Bits Online: because there's more than one way to compute . New about new versions of computer related stuff . AAA Matilda Web Search . ... Search . ... The Music Database . ... Musicians looking for other musicians (Free Service) . ... The Mac Game Database uses PHP and MySQL . ... Bioinformatics databases at the Montreal Children's Hospital using MySQL . ... DSL providers search with reviews Made with MySQL and Modperl, all pages are generated dynamically out of the MySQL database . ...

Еще в разделе: (Показать все результаты (>440) - itpm.msu.su/ )

• mod_ldap - Apache HTTP Server
• The paths database

. Please use the reference to MASTER DataBase as Lipunov et al., 2010, MASTER Robotic Net, Advances in Astronomy, vol. 2010, pp. 1-7 . - days . MASTER , 2002-2016

Еще в разделе: (Показать все результаты (>4) - apollo.sai.msu.ru/ )

• MASTER-II Kislovodsk