log . ... Thu, 05 Apr 2012 19:25:16 +0400 . ... Automated merge with ssh://kodomo/allpy . ... Tue, 03 Apr 2012 12:31:05 +0400 . Boris Nagaev . ... Merge fix of typo in algorithm name Bron?Kerbosch from default into 1.4.2 1.4.2 . ... Mon, 26 Mar 2012 22:09:09 +0400 . Boris Burkov . ... Sun, 25 Mar 2012 22:54:35 +0400 . ... Fri, 23 Mar 2012 16:52:31 +0400 . ... Tue, 20 Mar 2012 22:08:55 +0400 . ... pair-cores: add a patch upgrading allpy.structure 1.4.2 . ... Thu, 15 Mar 2012 23:17:23 +0400 . ...

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• allpy: cc1959669928

AliGraf - GeneBee Graphical Alignment Help Type in a title for this session for you to remember. ... Type in an alignment algorith name (Genebee, ClustalW, Manual.. ... Even - all column space are colored; Sparse - every column is colored with respect to the column weight: less weight more space is left uncolored; Very sparse - more space is left uncolored. ... Also you can get a picture when only selected groups are colored. ... Group set depends on selected group type. ...

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• AliComp - GeneBee Alignment Comparison Help
• GeneBee Graphical Alignment - Advanced
• AliComp - GeneBee Alignments Comparison - Advanced

... Markup We sometimes (very often) want to add marks on an alignment. ... Our definitions Examples What works Projects using allpy Future Converting alignment format alignment = protein. Alignment ().append_file( input_file, format= genbank ) alignment .to_file(output_file, format= fasta ) Converting alignment format -- the uncensored version from allpy import protein input_file = open( input_file.fasta ) output_file = open( output_file.fasta , w ) alignment = protein ...

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• http://kodomo.cmm.msu.ru/~ellys/blosum.html
• petri_dish: 15d7afe555a4
• petri_dish: 15d7afe555a4 scale.py

Given word length and max number of mismatches . Use MEME algorithm for define conserved blocks . Apply the Dynamic programming algorithm to create chain of the blocks . Refine the chain using combined profile for chain of blocks. ... Reduce word length and number of mismatches and repeat the procedure for spacer between the blocks. ... Create helix profile and apply MEME-like iterative procedure to find sets of helices that consistent lokated reative to conserved blocks . ...

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• SDPsite - Algorithm Format requirements
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A program for automatic detection of aligned blocks in multiple protein alignment. Paste your alignment in fasta-format here: . ... The program works slow - it takes 8 seconds to process alignment of 6 sequences of length 500. The program's development is supported by Russian Foundation for Basic Research (grant 10-07-00685-a) and Ministry of Education and Science of the Russian Federation (State Contract No. 07.514.11.4006). ...

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• Geometrical core

... Second, alignment of highly similar genomic sequences is useful for comparison of genome assemblies of the same organism or closely related ones. ... Nucleotide pangenome (NPG) of an input set of genomes is a set of aligned blocks, each block composed of orthologous fragments. ... Hemi-stable blocks (h-blocks) include no more than one fragment of a genome and lack a fragment of at least one of genomes. ... Blocks with repeats (r-blocks) include more than one fragment from one or several genomes. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/197.pdf

. PHP Manual . Prev . Next . (PHP 4 >= 4.0.2) mcrypt_enc_is_block_algorithm_mode -- Checks whether the encryption of the opened mode works on blocks . int mcrypt_enc_is_block_algorithm_mode ( resource td) . This function returns 1 if the mode is for use with block algorithms, otherwise it returns 0. (eg. 0 for stream, and 1 for cbc, cfb, ofb). Prev . Home . Next . mcrypt_enc_self_test . Up . mcrypt_enc_is_block_algorithm

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• mcrypt_module_is_block_algorithm_mode
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... Loke's and Barker's "deconvolution" idea is to represent the cross-section under the VES observation line by a set of 2D blocks with fixed boundaries and certain initial values of blocks' resisitivity. ... The TRF_2D for Windows program processes the traverse of VES with current line along the observation line. Three arrays date can be processed: . ... Up to 100 sounding points on the observation line. Up to 20 arbitrary current electrode spasings per sounding point. ...

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... О UNИX . ... HelpOnTables . ... Table Markup . ... General table layout and HTML like options . ... Line breaks within cells . ... Bulleted lists and other complex content within cells To create a table, start & end a new line using the table marker; two 'pipe' characters " || ... top left cell || top right cell || || bottom left cell || bottom right cell || ... Just use CSS-formatted styles and it will be inlined in the generated HTML tag. <style="..."> will put that style info into cell (td) html ...

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• HelpOnFormatting - UNИX
• WikiCourse/15 Tables - UNИX

... О UNИX . ... HelpOnTables . ... Table Markup . ... General table layout and HTML like options . ... Line breaks within cells . ... Bulleted lists and other complex content within cells To create a table, start & end a new line using the table marker; two 'pipe' characters " || ... top left cell || top right cell || || bottom left cell || bottom right cell || ... Just use CSS-formatted styles and it will be inlined in the generated HTML tag. <style="..."> will put that style info into cell (td) html ...

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• Other Shortcuts
• HelpOnFormatting - UNИX
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. SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins .

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• Inquiry information || Formats of alignments
• SDP home page
• About this project

The global preference setting WYSIWYG_EXCLUDE can be set to make the plugin sensitive to what is in a topic, before allowing it to be edited. ... html - HTML tags (e.g. <div> , not including <br>), or . ... For example, setting it to table=background,lang;tr=valign will stop the translator from trying to convert any table tag that has background or lang attributes, and any tr tag that has a valign attribute back to Foswiki | ... This topic: System > Plugins > WysiwygPlugin > WysiwygPluginSettings . ...

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• VarTABLE < System < Foswiki

... Numerical algorithms for the analysis of elastic waves in block media with thin interlayers" . Varygina M.P., Pokhabova M.A., Sadovskaya O.V., Sadovskii V.M. Numerical algorithms simulating the dynamic interaction of elastic blocks through thin viscoelastic interlayers in structurally inhomogeneous media such as rocks are proposed. ... Keywords: elastic waves, block medium, microstructure, rheological scheme, numerical algorithm . ... Pokhabova M.A. e-mail: pahomova_mariya_@mail.ru ...

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• "Incomplete algorithms in the large-block parallelism of combinatorial...
• "Numerical analysis of seismic wave propagation in block media on
• "Combined MPI+threads parallel implementation of the block method for

... FFTW - Concept Index . ... C multi-dimensional arrays . ... complex multi-dimensional transform , complex multi-dimensional transform . ... complex one-dimensional transform . ... in-place transform , in-place transform , in-place transform , in-place transform , in-place transform , in-place transform , in-place transform , in-place transform , in-place transform . ... rfftwnd array format , rfftwnd array format , rfftwnd array format , rfftwnd array format , rfftwnd array format . ... Центры . ...

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• Subarray Filetype Constructor | PARALLEL.RU - Информационно-аналитический центр
• Blocking receive | PARALLEL.RU - Информационно-аналитический центр по
• Blocking send | PARALLEL.RU - Информационно-аналитический центр по параллельным

... About lab . ... MSU Graphics & Media Lab (Video Group) . The filter is intended for high quality recovering visual quality of video compressed using conventional block-transform-based codecs (for example, video ripped from DVD, VideoCD or after decompressing by H.261, H.263, H.264, DivX, XviD, etc). ... Hard blockiness suppression is applied in case of extremely low bitrate when entirely flat single color blocks are appeared on the frame. ... Decompressed frame . ... Frame after Smart Deblocking . ...

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• Smart removal of blocking effects from video | Лаборатория компьютерной графики
• Removing of blocking effect from video | Лаборатория компьютерной графики и
• Removing of blocking effect from video | Graphics and Media Lab

... Астронет | ... планета Астронет | ... Сверхновые . Яркая сверхновая в M82 . ... 1999 2000 2001 2002 . ... NASA Web Site Statements, Warnings, and Disclaimers . NASA Official: Jay Norris. ... Публикации с ключевыми словами: starburst galaxy - star formation - supernova - взрывы сверхновых - сверхновые типа Ia . Публикации со словами: starburst galaxy - star formation - supernova - взрывы сверхновых - сверхновые типа Ia . ... NGC 6188 и NGC 6164 . ... NGC 1999: к югу от Ориона . ...

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• Clouds and the Moon Move to Block the Sun
• Sun Block
• Астронет > Sun Block

Электронная библиотека Попечительского совета . ... Golub G.H., van Loan C.F. - Matrix Computations . ... Название: Matrix Computations . Авторы: Golub G.H., van Loan C.F. Аннотация: . This third edition offers expanded treatment of areas such as CS decomposition, floating point arithmetic, special linear systems, the unsymmetric Lanczos process, and Toeplitz matrix eigenproblems. ... Bidiagonal matrix 17 . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Vassilevski P.S. - Multilevel Block Factorization Preconditioners: Matrix-based
• Blackford L.S., Choi J., Geary A. - ScaLAPACK User's Guide :: Электронная
• Lipschutz Seymour - Schaum's Outline of Theory and Problems of Linear Algebra

blockmode - filter to block average (x,y,z) data by mode estimation. blockmode [ xyz [ w ] file ( s ) ] -I x _ inc [ m|c ][/ y _ inc [ m|c ]] -R west / east / south / north [ r ] [ -H [ nrec ] ] [ -N ] [ -Q ] [ -V ] [ -W [ io ] ] [ -: ] [ -bi [ s ][ n ] ] [ -bo [ s ] ] blockmode reads arbitrarily located (x,y,z) triples [or optionally weighted quadruples (x,y,z,w)] from standard input [or xyz [ w ] file ( s )] and writes to standard ... If used, GMT default is 1 header record. ...

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• http://xray.sai.msu.ru/~ivan/gmt/man/blockmedian.html
• http://xray.sai.msu.ru/~ivan/gmt/man/blockmean.html

... The <P> element is used to define a paragraph. ... The ALIGN attribute can be used to explicitly specify the horizontal alignment. ... Note: Do not use empty paragraphs to add white space around headings, lists or other elements. ... By convention, the class names are interpreted hierarchically, with the most general class on the left and the most specific on the right, where classes are separated by a period. ... You can then explicitly specify line breaks in paragraphs using the BR element. ...

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• Tables
• Moving, Copying and Deleting blocks of text
• Block Quotes

CUDA Device Query (Driver API) statically linked version There are 4 devices supporting CUDA Device 0: GeForce GTX 295 CUDA Capability Major revision number : 1 CUDA Capability Minor revision number : 3 Total amount of global memory: 939524096 bytes Number of multiprocessors: 30 Number of cores: 240 Total amount of constant memory: 65536 bytes Total amount of shared memory per block: 16384 bytes Total ...

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• GeForce GTX 280 configuration and driver details