log . ... Fri, 18 Feb 2011 18:48:37 +0300 . boris (netbook) . allpy/structure: remove Sequence.pdb_residues, add Monomer.pdb_residue . ... boris . ... Thu, 17 Feb 2011 18:35:59 +0300 . Daniil Alexeyevsky . ... rename allpy_pdb to structure (see #29) . ... Wed, 16 Feb 2011 23:11:02 +0300 . ... Fixed setup.py to install allpy/data too (surprisingly, it did not do it itself) . ... boris (kodomo) . ... Tue, 15 Feb 2011 23:44:10 +0300 . ... Mon, 14 Feb 2011 22:21:39 +0300 . ...

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• allpy: ff0418199677 allpy/markups.py

S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• ETS sequence conservation

This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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... Timeline . ... 21:27 Changeset [51:f6d3c0539e8c] by Daniil Alexeyevsky <me.dendik@?> . ... 21:10 Changeset [50:21d63c918715] by Daniil Alexeyevsky <me.dendik@?> . ... 21:01 Changeset [49:ffd963641fd4] by Daniil Alexeyevsky <me.dendik@?> . ... 20:58 Changeset [48:0598557ca61b] by Daniil Alexeyevsky <me.dendik@?> . ... 20:56 Changeset [47:3f2ae407ae0c] by Daniil Alexeyevsky <me.dendik@?> . ... new Merged new with default . 16:05 Changeset [32:803f8353f38f] by Peter Zotov <whitequark@?> . ...

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• Changeset 4:7313e5a09453 тАУ Tanchiki
• Changeset 11:0ece930a4d1b тАУ Python Battle
• Changeset 35:dc8b4c81a72a тАУ Python Battle

... The approach for estimation of the homology search program sensitivity in nucleotide case was proposed in paper I.Anderson, A.Brass , "Searching DNA databases for similarities to DNA sequences: when is a match significant?" ... Seven sequences were chosen to have length varying from 100 to 1000 bp. ... Each of the 1000 artificially evolved sequences was used as a query for database search with Genebee search, blast-2.0.8 and fasta-3.3 as search engine. ... Sequence length . ... 100 . ... Blast 2.0 ....

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• RNA secondary structure prediction
• Screening protein sequence against PROSITE databank
• Databases

Электронная библиотека Попечительского совета . ... Heggins D., Taylor W. - Bioinformatics: Sequence, Structure and Databanks . ... Название: Bioinformatics: Sequence, Structure and Databanks . Авторы: Heggins D., Taylor W. Аннотация: . Bioinformatics covers practical important topics in the analysis of protein sequences and structures. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Lathrop R.H., Rogers Jr R.G., Smith T.F. - A Bayes-optimal sequence-structure
• Peters C.A., Steenbrink J.H. - Mixed Hodge Structures :: Электронная библиотека
• Cohen L.W., Ehrlich G. - The Structure of the Real Number System :: Электронная

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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• S : rm_systems
• wLake program homepage

... The LanHEP input file is the sequence of statements, each starts with a special identifier (such as parameter, lterm etc) and ends with the full-stop ' . ... This section is aimed to clarify the syntax of LanHEP input files, i.e. the structure of the statements. ... Let us consider the LanHEP input files for the Standard Model with both the t'Hooft-Feynman and unitary gauges. ... LanHEP allows the user to define several keys , and use these keys to branch among several variants of the model. ...

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• General structure
• MRS structure functions

... История кафедры . ... младших курсов . ... Уважаемые студенты 1-го, 2-го и 3-го курсов! ... Семинар кафедры проходит по пятницам в 15.20 в комн. ... а также на стендах кафедры на 2-м и 4-м этажах. Информацию о более ранних событиях см. в разделе "Жизнь кафедры" . ... 119991, Москва, Ленинские горы, д.1, стр.2, МГУ имени М.В.Ломоносова, физический факультет, кафедра фотоники и физики микроволн . ...

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... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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• Align tool for DNA-protein complexes
• Nhunt: program for nucleic acid sequence similarity search

Astronomy Picture of the Day . ... 5.02.1996 . ... Credit Copyright: NASA , COBE , DMR , Four Year Sky Map Explanation: Above are two microwave images of the sky, looking north and south of our galaxy 's equator, based on data from NASA's COBE satellite. ... These spots are the oldest structures known - probably the oldest structures humanity will ever know. ... February 1996 . ... 1995 1996 . ... Publications with keywords: COBE - hotspots . ... Microwave Hotspots: The Oldest Structures Known ...

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• COBE Hotspots:The Oldest Structures Known
• Астронет > COBE Hotspots: The Oldest Structures Known
• Астронет > COBE Hotspots:The Oldest Structures Known

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPsite
• SDPsite - PF01398
• SDPsite - PF01205

... February 6, 1996 . COBE Hotspots: The Oldest Structures Known . Credit: NASA , COBE , DMR , Four Year Sky Map . ... These spots are the oldest structures known - probably the oldest structures humanity will ever know. ... By studying the size and distribution of the spots found with COBE and future missions , astronomers hope to learn what matter and processes caused the spots to form - and hence determine the composition , density , and future of our universe. ... About APOD | ...

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• APOD: March 9, 1997 - COBE Hotspots:The Oldest Structures Known
• SAL- Other Scientific Fields - Chemistry, Biology Related - DCSE
• SAL- Other Scientific Fields - Chemistry, Biology Related - Protein Structure

Probing -directed structured elements detection in RNA sequences S.V. Vinogradova Moscow State University, Faculty of Bioengineering and Bioinformatics , 119991, Moscow , GSP-1, Leninskiye Gory, MSU, 1-73 kintany@gmail.com R.A. Soldatov Moscow State University, Faculty of Bioengineering and Bioinformatics , 119991, Moscow , GSP-1, Leninskiye Gory, MSU, 1-73 solrust@mail.ru M.A. Mironov ... 2013) Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/161.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/101.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/4.pdf

Enclosure structures of equal level line fields in the gradient filling problem" . Ivanov B.N. In this paper, the method of gradient filling of equal level line fields by color scale is considered. ... The root tree structure of equal level line enclosure is applied to the context analysis of all equal level line values in order to correctly specify the color values of their filling. A working algorithm of gradient filling of equal level lines is given. PostScript (in Russian) (2.67MB) . ...

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• "Routing on lattice-cellular structures"
• "Methods for automatic determining the efficiency of implementation of
• Composition of infinitary structures

Additional topic data, program-generated or from TWikiForms , is stored embedded in the topic text using META: tags . ... Meta Data Syntax . Meta Data Specifications . ... META:FORM . ... By default, TWiki stores topics in files on disk, in a really simple and obvious directory structure. ... Order of fields within the meta variables is not defined, except that if there is a field with key name , this appears first for easier searching (note the order of the variables themselves is defined). ...

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Next: SYSTEM CALL: msgget() Up: Internal and User Data Previous: Kernel msqid_ds structure . The kernel stores permission information for IPC objects in a structure of type ipc_perm . ... struct ipc_perm { key_t key; ushort uid; /* owner euid and egid */ ushort gid; ushort cuid; /* creator euid and egid */ ushort cgid; ushort mode; /* access modes see mode flags below */ ushort seq; /* slot usage sequence number */ }; . ... Finally, the slot usage sequence number is stored at the end. ...

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• SYSTEM CALL: msgctl()
• Kernel semid_ds structure
• Internal and User Data Structures

... 5DPK structure . Page of complex: 5DPK . Home Browse Download Help About Us . ... PDB ID . ... MUTY ADENINE GLYCOSYLASE BOUND TO A TRANSITION STATE ANALOG (1N) PAIRED WITH D(8-OXOG) IN DUPLEXED DNA TO 2.2 A . ... View in . ... Protein chains: . DNA chains: . ... 5dpk.pdb1.pdb . ... Pfam domains . ... Download file with secondary structure created by Stride . 5dpk.pdb1.pdb: [ download sequences in FASTA format ] . ... Click "SHOW" for view sequence . ... NPIDB team 2003 - 2016 . ...

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• NPIDB: Home

A collection class is a class that can contain a number of items in a certain data structure and perform operations on the contained items; insert, remove, find etc. ... QList ; a doubly linked list structure. ... An iterator is a class for safely traversing the items in a collection: . ... Qt has an array template class, QArray , which stores the items directly in the array. ... We discuss QList here, but the same applies for all collection classes and all collection class iterators. ... Classes: . ...

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• Qt API Structure Overview

Key-words: rhythm, stress, syllable, rhythmic structure, syntagm, utterance, prosody, speech production, speech perception . ... In speech communication, RS are both units of speech production and speech perception. ... The research of speech rhythm in diachrony and synchrony consists of the analysis and the description of speech rhythmic units concerning Old Church Slavonic, Old Russian, Old High German in diachrony and Modern Russian, German, Czech and Bulgarian in synchrony. ...

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