... 10 import sequence . ... 12 import allpy_data . ... 14 class Project ( object ): . ... 19 * alignment -- dict . ... 27 def __init__ ( self , * args ): . ... 31 Project(sequences, alignment) -> new Project with sequences and . ... 33 Project(fasta_file) -> new Project, read alignment and sequences . ... sequences , self . ... 97 >>> sequences,alignment=project.Project.get_from_fasta(open("test.fasta")) . ... 133 alignment [ sequences [ - 1 ]] = alignment_list . 134 return sequences , alignment . ...

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• allpy: 670ae384aa37
• allpy: 3a802644d798 test/usecase1.py
• allpy: 2f851b66a2c7 test/usecase1.py

... Block DNA GyrB" shows the score of pairs Lys|Lys, Lys|Arg and Lys|Ser respectively, from a block constituted by amino acid sequences from the same protein (DNAGyraseB), but from different organisms, for example GYRB_ECOLI, GYRB_YERPE (yeast), GYRB_HEINE, GYRB_MUSC (mouse). Block 200 illustrates the score of these pairs from 200 different blocks constituted by sequences from differnet organisms. ... Between the values of single BLock the differences are smaller than between the values of Blosum62. ...

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• TracChangeset тАУ Tanchiki
• Global and Local Alignment of A.A Sequences

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPpred
• SDPlight
• RNA Alignment

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... When detection of the change-points in alpha band power was performed as in the previous subsection, more than one change-point per second was obtained in average. ... The hypothesis of the hierarchy of EEG segmental descriptions (Kaplan 1998) (see subsection 7.3.2) is a theoretical reason for introducing the adjustment of the change-point detection probability. ...

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• Change-points in EEG components with different pattern
• Other prospects of the change-point based analysis

... EN)The invention relates to molecular biology, biotechnology, genetic engineering and to medicine and provides a multipurpose method for simultaneously detecting different RNAs in tested samples, including diagnosis purposes during mass analysis of viral and viroidal infections of organisms. ... A microchip for simultaneously detecting seven viral and viroidal potato infections which are contained in the tested sample and are more economically damaging for potato growing in Russia is also disclosed....

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• Kudryavtseva AV - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• DNA sequence : the journal of DNA sequencing and mapping - журнал | ИСТИНА -

... Twenty-four-hour observations on the behavior of white water-lily ( Nymphaea candida Presl.) flowers were conducted. The observations were made during different photoperiods in the Middle Russia (natural photoperiod, light flash in the dark daytime, absence of light daytime) and in the Northern Karelia (polar day). ... Movements of water-lily flowers appear to serve for pollination optimization. ...

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• The variability of different Drosera

... x264 is an open source codec of standard MPEG4 AVC/H.264, developed by programmers from all over the world. ... Accumulated during previous frames' compressions statistic is actively used by codec to improve effectiveness of adaptive models. ... These parameters are used only before encoding start, so, our improvements are more significant for short sequences. ... 3 Results of codec x264 modification on "flower" sequence . ... 5 Results of codec x264 modification on "flower" sequence, low bitrates ....

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• x264 codec improvement | Лаборатория компьютерной графики и мультимедиа
• MSU Video Codec Comparison | Graphics and Media Lab
• MSU Video Codec Comparison | Лаборатория компьютерной графики и мультимедиа

. There are several different shells available for Unix; the most popular are described here. You can use any one of these shells if they are available on your system. And you can switch between the different shells once you have found out if they are available. Bourne shell (sh) . C shell (csh) . TC shell (tcsh) . Korn shell (ksh) . Bourne Again SHell (bash) .

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• Using a different printer
• Example of using a different printer
• Understanding HTML and MIME

О лаборатории . ... Лаборатория теоретической биофизики . ... ERG group members work with different types of molecules and consequently added new atomtypes into classical OPLS-AA distributed with GROMACS. Now the ERG patch of OPLS-AA force field is published at bitbucket as a repository. ... Нет комментариев " OPLS-AA patch for different types of molecules " . ... OPLS-AA patch for different types of molecules . ... OPLS-AA? in All-atom automatic OPLS-AA topology? ... 2016 ERG Research Group . ...

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• comcon1 ERG Research Group: Лаборатория теоретической биофизики
• OPLS ERG Research Group: Лаборатория теоретической биофизики
• topology ERG Research Group: Лаборатория теоретической биофизики

Выпускники 1968 . ... Список выпускников . Этот список мы не контролируем . ... список не полный . ... Список выпускников из зарубежья . ... Web - ...

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... In the meanwhile, Fred continued development, going on to Net-2e, which features a much revised design of the networking layer. ... Most notable about Net-2e is the incorporation of DDI, the Device Driver Interface . ... For this, he integrated some of the BSD networking code in the kernel. ... This only applies to commands that deal with kernel internals rather closely; applications and common networking commands such as rlogin or telnet run on either of them. ...

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• How to Dial a Number-- the dial File
• Be Paranoid-- Call Sequence Checks
• Multi-Processing Modules (MPMs) - Apache HTTP Server

Pentium 4 2.2 GHz . ... Pentium D 3.0 GHz, serial . Pentium D 3.0 GHz, parallel or multithreaded . ... input , output ) . ... Pentium 4 2.2 GHz , P4B (Northwood), 512 Kb L2 cache, no HTT support, 2200 MHz, 400 MHz FSB, 512 MB PC800 RamBus RIMM RDRAM, 60 GB IDE HDD, Windows 2000 Professional SP4. ... Serial - PC GAMESS is running using only one core . Parallel or multithreaded - PC GAMESS is running using only both cores in parallel (tests 1,3,5,6) or multithreaded (tests 2 and 4) modes. ...

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• PC GAMESS/Firefly DOCUMENTATION - MPI bindings for Windows

... Главная -> Фильмы -> A Different Loyalty . ... Matthew Scurfield . ... Американка Салли влюблена вљнеотразимого англичанина ЛеољКоффилда, который вскоре становится еељмужем. Внезапно Леољзагадочным образом исчезает, иљлишь спустя месяцы тревог иљподозрений Салли узнает, чтољее мужљбыл тайным сотрудником КГБљи теперь живет вљМоскве. ... Но внезапно Лео загадочным образом исчезает, и лишь спустя месяцы тревог и подозрений Салли узнает, что ее муж был тайным сотрудником КГБ и теперь живет в Москве. ...

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• A Different Kind of Christmas - Фильмы - Kinfo.ru
• A Different World - Фильмы - Kinfo.ru
• Different - Фильмы - Kinfo.ru

Projects . ... Education . People . ... Publications . ... TmrnaEnglish . tmRNA (also known as 10Sa RNA ) stands for transfer-messenger-RNA. The gene encoding the tmRNA is ssrA . It is found in all bacterial genomes that have been sequenced, and is an important part of translation regulation. ... Here you can found 3D models of tmRNA inside 70S ribosome at different positions. ... Copyright &© by the contributing authors. ... Ideas, requests, problems regarding TWiki? ...

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• TWikiMetaData - TWiki - TWiki
• TWikiMetaData - TWiki - TWiki - (printable)

Previous article . ... Optimization of hybridization analysis on DNA-microarrays with colorimetric detection on basis of horseradish peroxidase . Abstract The method of hybridization analysis on DNA-microarrays with colorimetric detection on basis of horseradish peroxidase was developed. ... Moscow University Chemistry Bulletin . 2008, Vol. ... Copyright (C) Chemistry Dept., Moscow State University, 2002 . ... Copyright (C) Chemisty Department of Moscow State University . ...

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• Influence of Zonal Factor and Agricultural Treatment on Atrazine Toxicity in
• Moscow University Chemistry Bulletin Vol. 56, No. 4, P. 221 (2015)
• Moscow University Chemistry Bulletin Vol. 53, No. 6, P. 405 (2012)

... Fortranљ66 . ... Fixed form . ... Whole Fortranљ66 . ... Continuation line indicated in column 6 . ... Blank line as comment . ... Extension in Unix .f .f .f .f90 .f .f90 . Extension in DOS .FOR .FOR .FOR .F90 .FOR .F90 . ... This applies to both fixed form and free form source code. ... Fixed form of the source code is discouraged in Fortran 95! ... In UNIX there is no concept called extension, and the extensions are not specified in the Fortran standard, but in informal manufacturer standards. ...

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• Image: Coast is pretty different here -- from beaches to unclimbable rocks.
• Introduction
• Главная последовательность. The Main Sequence

... The pivotal role of the beta 7 strand in the intersubunit contacts of different human small heat shock proteins. ... It is concluded that the beta 7 strand participates in the intersubunit interaction of four human small heat shock proteins (alpha B-crystallin, HspB1, HspB6, HspB8) having different structure of beta2 strand of alpha-crystallin domain and different length and composition of variable N- and C-terminal tails. ...

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• [Different domain organization of two main conformational states of
• Different neuronal Na(+)/K(+)-ATPase isoforms are involved in diverse signaling
• Chaperone-like activity of monomeric human 14-3-3zeta on different protein

.

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• Laboratory-chair of Discrete mechanics on a microscopic scale
• Табл. 1. Характер лимитирования при потенциальном ограничении роста альгоценоза

... Site is discontinually updating by professional biologists and students of biology faculty of MSU. ... All Journals . This list contains all journals in JCatalog database. Select the letter and click it. If there is no action when clicking then no journals begins from this letter. Set the mouse cursor on any letter and you will know the number of journals; gray letter colour means that no journals begins from it. ... View whole journal list(1749) . ... Index | All journals . ...

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• Different alphabetic indexes of JCatalog

... Winner of joint DAAD (German Academic Exchange Service) and Moscow State University Scholarships Program ?Vladimir Vernadskii? for joint research in Germany. 2011-present. ... 16.11-12.12.2009, Collaborative Research Center 701 of Bielefeld University, Bielefeld, Germany. ... Another ham sandwich in the plane? (joint work with Alexey Balitskiy and Roman Karasev from Moscow Insitute of Physics and Technology), November 9, 2013, Kolloquium Kombinatorik, TU Ilmenau, Ilmenau, Germany. ...

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• Topology section