... allpy/structure.py . ... 1.1 --- a/ allpy /structure.py Wed Feb 23 12:08:47 2011 +0300 1.2 +++ b/ allpy /structure.py Wed Feb 23 18:13:56 2011 +0300 1.3 @@ -252,9 +252,12 @@ 1.4 result = [] 1.5 Block = self.__class__ 1.6 # for sorting 1.7 - key_column = lambda c: self. columns .index(c) 1.8 - key_ sequence = lambda s: self. sequences .index(s) 1.9 - vertices = set (sum([seq for seq in self. sequences ], [])) 1.10 + column2pos = {} 1.11 + for i, column in enumerate(self ...

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• allpy: 9665a6acdd53
• allpy: 5e666e28c348
• allpy: 62e38970ffa2

Standard (Mandatory) qualifiers: [-sequence] seqall (Gapped) sequence(s) filename and optional format, or reference (input USA) Additional (Optional) qualifiers: -outfile outfile [stdout] If you enter the name of a file here then this program will write the sequence details into that file. -html boolean [N] Format output as an HTML table Advanced (Unprompted) qualifiers: -[no]columns boolean [Y] Set this option on (Y) to print the sequence information into neat, aligned columns in the output file. ...

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• http://kodomo.cmm.msu.ru/~jesus_crist/infoseq.help
• term1

... Accepted input types are: A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. ... Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, U and * are acceptable letters (see below). ...

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... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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... 2011/12/09 . ... added alignment merging . added parameter corresponding to the width of output alignment . fixed homologue searching for very long query sequences . ... Copyright 2010-2011 Yury Pekov ...

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... It interpolates the grid at the positions in the table and writes out the table with the interpolated values added as a new column. A bicubic [Default] or bilinear [ -Q ] interpolation is used, requiring boundary conditions at the limits of the region (see -L flag option). xyfile This is an ASCII [or binary, see -b ] file where the first 2 columns hold the (x,y) positions where the user wants to sample the 2-D data set. ... Default is 2 input columns]. -bo Selects binary output. ...

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Электронная библиотека Попечительского совета . ... Smith B.J. - Protein Sequencing Protocols . ... Название: Protein Sequencing Protocols . Автор: Smith B.J. Аннотация: . A timely collection of current and state-of-the-art techniques for protein and peptide preparation and sequencing-all described by hands-on, masters of the procedures. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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... Another way to fend off and detect impostors is to use call sequence checks. Call sequence checks help you protect against intruders that somehow managed to find out the password you log into your UUCP system with. ... When the attacker call your UUCP feed and steals your mail, this will increase the feeds call sequence number by one. ... If you have enabled call sequence checks, you should check your log files regularly for error messages that hint at possible attacks. ...

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Adiantum hispidulum chloroplast genome high-throughput sequencing and comparative analysis of cpDNA inverted repeat regions of Adiantum species Belenikin M.S. 1 1,2,3 , Krinitsina A.A.1, Logacheva M.D.1, Kuptsov S.V.1, Speranskaya A.S. 1 Lomonosov Moscow State University ... Comparison of our data with previously published sequences demonstrated the undoubted common origin of Russian isolate and cultivated isolate "A79" from USA: Virginia (see table 1). ...

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. PHP Manual . Prev . Next . (PHP 3 <= 3.0.18, PHP 4 >= 4.0.0) Ora_Numcols -- Returns the number of columns . int ora_numcols ( int cursor_ind) . ora_numcols() returns the number of columns in a result. Only returns meaningful values after an parse/exec/fetch sequence. See also ora_parse() , ora_exec() , ora_fetch() , and ora_do() . Prev . Home . Next . Ora_pLogon . Up . Ora_Numrows

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SVETKA, a program for Analysis of Multiple Sequence Alignments . ... Analyse your alignment . ... Alignment . Nota Bene! .aln or .fasta format required!! Look here for comments . ... Nota Bene! Special scheme format required! ... Development of the program is supported by Ministry of Education and Science of the Russian Federation (State Contract No. ...

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Astronomy Picture of the Day . La Palma Eclipse Sequence . ... Credit Copyright: Miguel Claro ( TWAN ) Explanation: At left, a dramatic image sequence follows late September's total lunar eclipse above a rugged landscape and sea of clouds from the Canary island of La Palma . Composited in a circular fisheye projection, the brightness of the Full Perigee Moon changes drastically in transition from outside the total eclipse phase compared to its dim glow during the 72 minute long totality . ...

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. [ Войти ] . Главная -> Фильмы -> The Lost Spider Pit Sequence . Пользователи . Демо . Деньги . Фильмы . Форум . The Lost Spider Pit Sequence . Новая Зеландия 2005 . отметить . Фантастика . Ужасы . Триллер .

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• MIDI Sequencer - Help, plz - Public forum of MSU united student networks

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... Sequence design of bioinspired copolymers with functionality on the nano-metre scale . Co-ordinator - Professor H.Tenhu . We adopt a biomimetic approach to design sequences in synthetic copolymers. ... 1) to undertake a detailed investigation of a number of methods to design non-random sequences of monomer units in copolymers with special emphasis on biomimetic approaches; . ... Professor . ... University of Helsinki, Department of Chemistry, . ... Moscow State University . ... RUSSIA . ...

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