... 6 import sequence . ... 19 * self.alignment -- alignment object, which the block belongs to . ... 22 * self.positions -- list of positions of the alignment.body that . ... 25 Don't change self.sequences -- it may be a link to other block.sequences . ... 34 def __init__ ( self , alignment , sequences = None , positions = None ): . ... 75 If more than one pdb chain for some sequence provided, consider all of them . ... 129 alignment_sequence = self . ... 136 def sequences_chains ( self ): . ...

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• allpy: c1b67c10f8f3 lib/block.py
• allpy: a7eed9c3ab8f allpy/block.py
• allpy: lib/block.py annotate

Alignment COG1325 . ... It is supported by 29 positions - that's written on the scheme. ... Such are positions number 5 ( leucine opposite isoleucine , valine and methyonine ), 30 ( glutamic acid opposite arginine , glycine and serine ), 51 ( threonine opposite alanine , phenylalanine and serine ), 55 ( phenylalanine opposite leucine , histidine and tyrosine ), 111 ( phenylalanine opposite isoleucine , leucine and valine ), 123 ( valine opposite isoleucine , ...

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• About authors ot this complex
• About this project
• SDP home page

... annotate . ... 6 def __init__ ( self , position , velocity , lifetime , mutated ): . ... 23 def check_collision ( self , bacteria , delta , bact_r , delta_t ): . ... 34 def move ( self , bacteria , delta_t , radius , delta , bact_r ): . ... 40 def collision ( self , other , bacteria , delta_t , radius , delta , bact_r ): . ... 52 def asexual ( self , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 67 def sexual ( self , other , bacteria , delta_t , radius , delta , bact_r , . ...

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• petri_dish: tk1.py annotate

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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• PLANdbAffy: probe-level annotation database for Affymetrix expression

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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Электронная библиотека Попечительского совета . ... Althaus E. - A branch-and-cut algorithm for multiple sequence alignment . ... Название: A branch-and-cut algorithm for multiple sequence alignment . Автор: Althaus E. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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... GeneBee . ... A4 - Genebee Adaptive Automated Annotation . ... Annotation title . General options . ... DotHelix options . ... threshold (4 to 50) . ... DNA/RNA Dayhoff Johnson Blosum 30 Blosum 50 Blosum 62 Pam 60 Pam 120 Pam 250 Gonnet 120 Gonnet 250 Gonnet 350 . Supermotif's options . ... Maximum number . ... FT fragment picture options . Max number of FT . ... Other options . ...

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• Screening by similarity
• RNA secondary structure prediction
• Genebee Predicted Annotation Help

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPlight
• SDPpred
• SDPsite

Evalign . Evalign is a computerised evaluation method for protein sequence alignment algorithm. It compares computer alignments with structural alignments of protein sequences and tells how correct your sequence alignment program is. It gives additional information on the characteristics of different alignment algorithms and shows types specific failings in alignment. ... None . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

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• SAL- Other Scientific Fields - Chemistry, Biology Related - SC_rate
• SAL- Other Scientific Fields - Chemistry, Biology Related - ClustalW
• SAL- Other Scientific Fields - Chemistry, Biology Related - GRS

NGS Data Analysis with Unipro UGENE Olga Golosova, Yuriy Vaskin, German Grekhov, Yuliya Algaer UNIPRO, Lavrentieva ave. ... That is where Unipro UGENE NGS framework comes in play. ... Moreover, the UGENE toolkit allows one to automate common tasks by creating workflows with the integrated tools using the UGENE Workflow Designer. Analysis of NGS data with UGENE may start, for example, from quality control of raw NGS data, received from a sequencing facility, with the integrated FastQC [3] tool. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/136.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/4.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/66.pdf

M55 Color Magnitude Diagram . ... B.J. Mochejska , J. Kaluzny ( CAMK ), 1m Swope Telescope Explanation: This color "picture" of globular star cluster M55 may not look like any star cluster you've ever seen. ... In the picture, a Color Magnitude Diagram (CMD), M55's individual stars are represented as dots whose color indicates relative temperature, red (cool) to blue (hot). ... The broad swath extending diagonally from the lower right is the cluster's main sequence . ... Specific rights apply . ...

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• Астронет > M55 Color Magnitude Diagram
• M55 Color Magnitude Diagram
• Waterton Lake Eclipse

Mustela . On a taxonomic position of the weasel (Carnivora, Mustela ) from the Cheju Island (South Korea) . ... The weasel from Cheju Island (formerly в?' Quelpart Island), which is situated in Korean Strait south of the coast of South Korea, was described as a separate species Lutreola quelpartis Thomas, 1908. ... Abramov A.V. 2000b. The taxonomic status of the Japanese weasel, Mustela itatsi (Carnivora, Mustelidae) // Zoologicheskii Zhurnal. ... A Pictorial Guide to the Mammals of Japan. ...

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• Taxonomic position of Eptesicus bobrinskoi - abstract

The Isaac Newton Institute (Instituto Isaac Newton) for astronomical research (INI) was founded in 1978 by Gonzalo Alcaino. The main office is located in the eastern outskirts of Santiago (Chile). ... The Moscow branch was the first one established outside Chile. ... Besides the above named branches, the Chilean staff of the Isaac Newton Institute is involved in collaboration with astronomers of the Observatory of Rome in several research projects using data secured from telescopes in Chile. ...

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• Space position
• AXAF-Chandra

DYNAMICS OF AN ECONOMIC CONDITION FROM POSITIONS OF SYNERGETICS Schwarzman M.M. Branch "MSA name of admiral F.F. Ushakov" in Rostov-on-Don Russia, 344006, Sedova 8, k.3, Tel/Fax (863)2694496; E-mail: black_drive@smtp.ru In this work the reasons which have caused an unstable condition of our economy are analyzed from the positions of synergetics. The direction of the appendix of resources which should promote transition of economy in a stable condition is offered. ...

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... 2015 . ... Ph.D., Associate Professor, Professional Development Faculty, Nizhny Novgorod Institute of Management branch of The Russian Presidential Academy of National Economy and Public Administration, Nizhny Novgorod, Russian Federation. ... The author considers four aspects of adaptation: social, organizational, professional and psychophysiological, which federal civil servants face at appointment to a vacant post. ... Federal civil servants, public service reserve, rotation, adaptation. ...

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... Determination of dispersion energy coefficients for SF 6 –SF 6 and SF 6 –Ne at low energies from experiments with supersonic pulsed jets . Abstract A method for the experimental determination of constant C 6 for the attractive branch of interaction potential was based on the kinetic model of a supersonic pulsed jet expansion, was suggested. ... Moscow University Chemistry Bulletin . 2014, Vol. ... Copyright (C) Chemistry Dept., ... Copyright (C) Chemisty Department of Moscow State University . ...

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• Спецкурсы кафедры "Химическая энзимология. Основы биоинформатики и

Key-words: rhythm, stress, syllable, rhythmic structure, syntagm, utterance, prosody, speech production, speech perception . ... In speech communication, RS are both units of speech production and speech perception. ... The research of speech rhythm in diachrony and synchrony consists of the analysis and the description of speech rhythmic units concerning Old Church Slavonic, Old Russian, Old High German in diachrony and Modern Russian, German, Czech and Bulgarian in synchrony. ...

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• CURRICULUM VITAE

Contents] [Prev page] [Next page] [Index] . ... Positioning HTML Content Using Styles . Positioning HTML Content Using the <LAYER> Tag . ... Absolute Positioning . ... Creating Positioned Blocks of Content Dynamically . Writing Content in Positioned Blocks . ... Positioning the Flower Layers . Positioning and Moving the Fish and Poles . Defining the onLoad Handler for the BODY Element . ... Adding Another Layer to Contain the Reverse Fish Image . ... The Initialization Functions . ...

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• Long description for example illustrating positioning with respect to a
• Long description illustrating absolute positioning with respect to the initial
• Long description for example illustrating absolute positioning

II INTERNATIONAL CONFERENCE "ELECTRONICS AND APPLIED PHYSICS" Taras Shevchenko National University of Kyiv, Radiophysics Faculty 11-14 October 2006, Kyiv, Ukraine The conference is organized by |[pic] |Taras Shevchenko |[pic] |RadioPhysics | National University | ... of Kyiv | ... The main organizer of the Conference is the Radiophysics Faculty of Taras Shevchenko National University of Kyiv. ... Address Radiophysics Faculty of Taras Shevchenko National University of Kyiv, 2, Acad. ...

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• Физический факультет МГУ им. М. В. Ломоносова
• Dean of the faculty, Prof. Vladimir Trukhin awarded by the French decoration of

... N.5, pp.592-597 (scanned PDF file, English version) . ... A.V.Shanin, Embedding formula for electromagnetic diffraction problem // Zapiski seminarov POMI, V.324, pp.247-261 (2001), in Russian, (PDF file, Russian version) (PDF file, English version) . ... PDF file) . ... Shanin A.V., Coordinate equations for the Laplace-Beltrami problem on a sphere with a cut // QJMAM, 2005 (58) 2, 1-20 The preprint versions of two previous papers have been sent to URSI contest: Paper 1, PDF file , Paper 2, PDF file ...

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