... file . ... diff . ... file log . ... line diff . ... 1.52 + Sequence = cls. sequence _type 1.53 + not_gap = lambda (i, char): char != - 1.54 + no_gaps = line.replace( - , ) 1.55 + sequence = Sequence (no_gaps, name , description , source) 1.56 + for i, (j, char) in enumerate(filter(not_gap, enumerate(line))): 1.57 + self[j][seq] = sequence [i] 1.58 + self. sequences .append( sequence ) 1.59 + 1.60 + @classmethod 1.61 + def from_fasta(cls, ...

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• allpy: allpy/dna.py annotate
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... 5 def __init__ ( self , position , velocity , lifetime , mutated ): . ... 11 def check_collision ( self , bacteria , delta , bact_r ): . ... 33 def asexual ( self , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 38 def sexual ( self , other , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 41 def find_place_a ( self , bacteria , delta , bact_r ): #searches for place for children . ... 48 def find_place_s ( self , other , bacteria , delta , bact_r ): . ...

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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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A.N. Belozersky Institute . Bioinformatics Portal . ... Russian EMBnet Node . ... AliBee - Multiple alignment Release 2.0 . ... Grants information . ... Our Institute is a scientific department of Moscow State University. ... Address: Belozersky Institute,Moscow State University,Leninskie Gory 1,Bldg. ... Information about our activities and EMBnet resources around the World is available here . Information about our educational activities with kids, children and teenagers is available here . ...

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... Parsimony method . ... It is based on the following principle: the ancestral sequences (posed in nodes of a phylogenetic tree) should be such that the minimal required number of character replacements on the branches of the tree is less than for any other choice of sequences. ... If the preliminary character of the node is * , but the output character of its immediate ancestor is some letter (say, X ), and its set of possible characters contains X , then the output character of the node is also X . ...

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• About this project
• About authors ot this complex
• Inquiry information || Distances

... Second-year students classes . ... The course offers profound description of popular techniques of parallel programming such as OpenMP and MPI. ... Rapid growth of productivity of the modern computing systems is achieved by using parallel processors and multicore systems. ... As a result, by the and this course, students acquire knowledge about the popular parallel programming techniques, knowledge of modern high-performance computing systems and practical skills to work with them. ... Moscow: Binom...

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The QGManager class provides one-dimensional geometry management. ... void  setBorder  ( int b )  . ... bool  add  ( QChain * destination, QChain * source, int stretch = 0 )  . bool  addWidget  ( QChain *, QWidget *, int stretch = 0 )  . bool  addSpacing  ( QChain *, int minSize, int stretch = 0, int maxSize = unlimited )  . bool  addBranch  ( QChain * destination, QChain * branch, int fromIndex, int toIndex )  . ... Widgets are organized in chains, which can be parallel or serial. ...

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Protein 3D architectures and structural motifs: automated annotation E.A. Aksianov1, A.V. Alexeevski 1 2 1,2 Belozersky Institute, Lomonosov Moscow State University, Leninskie Gori 1, Moscow, Russia Scientific Research Institute for System Studies (NIISI RAN), Moscow, Russia evaksianov@gmail.com, aba@belozersky.msu.ru Description of a protein 3D structure in terms of structural domains, architecture, topology and structural motifs is a hard problem. ... The core is extended by small -sheet (unit_3). ...

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PHP Manual . ... PHP 4 >= 4.0.0) domxml_children -- Returns children of a node or document . array domxml_children ( object doc|node) . ... This function is EXPERIMENTAL . ... In the following example the variable children will contain an array with one node of type XML_ELEMENT. ... php $doc = new_xmldoc("1.0"); $root = $doc->add_root("HTML"); $head = $root->new_child("HEAD", ""); $head->new_child("TITLE", "Hier der Titel"); $head->set_attribute("Language", "ge"); $children = $head->children(); ?> ...

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. This diagram illustrates a sample document tree. The root node (HTML) is at the top. It has two children: HEAD and BODY. HEAD has one child: TITLE. BODY has three children: H1, P, and UL. The UL has 3 LI leaf nodes. In outline form, one . indenting for each level, that gives: HTML .HEAD ..TITLE .BODY ..H1 ..P ..UL ...LI ...LI ...LI . Return to image.

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• Long description of example illustrating table row height calculations and
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... Siberian Lang . Minority languages of Siberia as our cultural heritage . ... The project ?Development of the web-site ?Minority languages of Siberia as our cultural heritage? (on the material of the languages of the basin Middle Yenisei and the Middle and the Upper Taz)? was realized at the Laboratory for Computational Lexicography, Research Computing Centre, Lomonosov Moscow State University, with financial support from Russian Foundation for the Humanities, grant 12-04-12049.љ ...

12. Althaus E. - A branch-and-cut algorithm for multiple sequence alignment ::

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14. Index of /static/AltlinuxOrg_Branches_ReleasePolicy

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17. http://mirror.msu.net/pub/gentoo-portage/eclass/bzr.eclass

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