... file . ... diff . ... file log . ... line diff . ... 1.52 + Sequence = cls. sequence _type 1.53 + not_gap = lambda (i, char): char != - 1.54 + no_gaps = line.replace( - , ) 1.55 + sequence = Sequence (no_gaps, name , description , source) 1.56 + for i, (j, char) in enumerate(filter(not_gap, enumerate(line))): 1.57 + self[j][seq] = sequence [i] 1.58 + self. sequences .append( sequence ) 1.59 + 1.60 + @classmethod 1.61 + def from_fasta(cls, ...

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• allpy: a3df15a42f9d allpy/fileio.py
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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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... 5 def __init__ ( self , position , velocity , lifetime , mutated ): . ... 11 def check_collision ( self , bacteria , delta , bact_r ): . ... 33 def asexual ( self , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 38 def sexual ( self , other , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 41 def find_place_a ( self , bacteria , delta , bact_r ): #searches for place for children . ... 48 def find_place_s ( self , other , bacteria , delta , bact_r ): . ...

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... Second-year students classes . Introduction to Linux . ... 32-bit Microcontroller Programming . ... In the given practical special course we address user techniques for working with Linux OS; we study the interface of the command line in great detail, methods of automation and batch processing, composition of scientific articles as well as the specifics of software design by using in-built toolkit. ... Use of console interface of the command line, automation (bash scripts) . ...

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A.N. Belozersky Institute . Bioinformatics Portal . ... Russian EMBnet Node . ... AliBee - Multiple alignment Release 2.0 . ... Grants information . ... Our Institute is a scientific department of Moscow State University. ... Address: Belozersky Institute,Moscow State University,Leninskie Gory 1,Bldg. ... Information about our activities and EMBnet resources around the World is available here . Information about our educational activities with kids, children and teenagers is available here . ...

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... Criteria of branch quality . As it was repeatedly told , phylogenetic trees consist from branches. ... I. e., those positions, which can separate sequences of the branch from other sequences in the alignment. ... Measure of branch separation . ... Here and further: A - branch of the tree, i , j - sequences of alignment . ... That's why number of conserved positions in some branch should be considered in complex with the distribution of conserved positions in the whole alignment. ...

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• Inquiry information || Parsimony algorithm
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The QGManager class provides one-dimensional geometry management. ... void? setBorder ?(?int?b?)? . ... bool? add ?(?QChain?*?destination, QChain?*?source, int?stretch?=?0?)? . bool? addWidget ?(?QChain?*, QWidget?*, int?stretch?=?0?)? . bool? addSpacing ?(?QChain?*, int?minSize, int?stretch?=?0, int?maxSize?=?unlimited?)? . bool? addBranch ?(?QChain?*?destination, QChain?*?branch, int?fromIndex, int?toIndex?)? . ... Widgets are organized in chains, which can be parallel or serial. ...

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Protein 3D architectures and structural motifs: automated annotation E.A. Aksianov1, A.V. Alexeevski 1 2 1,2 Belozersky Institute, Lomonosov Moscow State University, Leninskie Gori 1, Moscow, Russia Scientific Research Institute for System Studies (NIISI RAN), Moscow, Russia evaksianov@gmail.com, aba@belozersky.msu.ru Description of a protein 3D structure in terms of structural domains, architecture, topology and structural motifs is a hard problem. ... The core is extended by small -sheet (unit_3). ...

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PHP Manual . ... PHP 4 >= 4.0.0) domxml_children -- Returns children of a node or document . array domxml_children ( object doc|node) . ... This function is EXPERIMENTAL . ... In the following example the variable children will contain an array with one node of type XML_ELEMENT. ... php $doc = new_xmldoc("1.0"); $root = $doc->add_root("HTML"); $head = $root->new_child("HEAD", ""); $head->new_child("TITLE", "Hier der Titel"); $head->set_attribute("Language", "ge"); $children = $head->children(); ?> ...

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• hw_Children
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. This diagram illustrates a sample document tree. The root node (HTML) is at the top. It has two children: HEAD and BODY. HEAD has one child: TITLE. BODY has three children: H1, P, and UL. The UL has 3 LI leaf nodes. In outline form, one . indenting for each level, that gives: HTML .HEAD ..TITLE .BODY ..H1 ..P ..UL ...LI ...LI ...LI . Return to image.

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• Long description of example illustrating table row height calculations and

... Siberian Lang . Minority languages of Siberia as our cultural heritage . ... The project ?Development of the web-site ?Minority languages of Siberia as our cultural heritage? (on the material of the languages of the basin Middle Yenisei and the Middle and the Upper Taz)? was realized at the Laboratory for Computational Lexicography, Research Computing Centre, Lomonosov Moscow State University, with financial support from Russian Foundation for the Humanities, grant 12-04-12049.  ...

13. "The system X-Com for metacomputing support: architecture and technology"

14. CDFE - Centre for Photonuclear Experiments Data - Home page

15. Index of /static/AltlinuxOrg_Branches_ReleasePolicy

16. Index of /static/AltlinuxOrg_Branches_ReleasePolicy

17. Einstein A., Podolsky B., Rosen N. - Can quantum-mechanical description of

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19. http://mirror.msu.net/pub/gentoo-portage/eclass/bzr.eclass

20. Pod-Moscowny Branch of Moscow University in Chernogolovka, Home page