SVETKA, a program for analysis of different alignments . Back to the help page . ... Such a feature can look like " Leucine in the position 362 of the alignment of the entire family " and can, in many cases, be a "decision rule" to distinguish sequences from two sides of a tree branch. ... Comparing the alignment with an input tree (the tree may be entered by the user or reconstructed with the WPGMA algorithm), the program detects supporting positions of the alignment for every branch the tree. ...

Еще в разделе: (Показать все результаты (>1492) - monkey.belozersky.msu.ru/ )

• SDP home page
• Example of supporting positions
• About authors ot this complex

Node ID 38888b46c342b9f51d12d4cd92947da07c7ad2c9 # Parent 2a6c2cffa891feca550fd7f18a9ad461600150c2 Added usecases from wiki to test / directory diff -r 2a6c2cffa891 -r 38888b46c342 test /usecase1.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ test /usecase1.py Fri Dec 17 00:45:20 2010 +0300 @@ -0,0 +1,35 @@ +from allpy import protein + +# Create sequences from string representation ...

Еще в разделе: (Показать все результаты (>62875) - kodomo.fbb.msu.ru/ )

• allpy: df571a5233fb test/usecase2.py
• allpy: 38888b46c342
• allpy: 72db5aa461c0 allpy/block.py

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

Еще в разделе: (Показать все результаты (>6989) - mouse.belozersky.msu.ru/ )

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

Еще в разделе: (Показать все результаты (>32) - mouse.genebee.msu.ru/ )

... SDPfox - the software package for the prediction of functional specificity groups and amino acid residues that determine the specificity using MPA. ... Amino acid residues that determine differences in protein functional specificity and account for correct recognition of interaction partners, are usually thought to correspond to those positions of a protein multiple alignment, where the distribution of amino acids is closely associated with grouping of proteins by specificity. ...

Еще в разделе: (Показать все результаты (>145) - bioinf.fbb.msu.ru/ )

• SDPsite - Algorithm Format requirements
• SDPpred
• SDPsite

GRS . GRS is a graphic tool for retrieval and visualization of genome segments from partially or completely sequenced genomes. To facilitate visual identification of conserved genomic motifs, genes are color-coded according to their presumed functional roles. ... The gene string analysis option of GRS allows the identification of genes that are identically arranged in any pairwise set of genomes. ... None . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ...

Еще в разделе: (Показать все результаты (>1702) - www.sai.msu.su/ )

• SAL- Other Scientific Fields - Chemistry, Biology Related - Evalign
• SAL- Other Scientific Fields - Chemistry, Biology Related - SC_rate
• SAL- Other Scientific Fields - Chemistry, Biology Related - ClustalW

... High-scoring Sequences . ... The E-value of a sequence is the expected number of sequences in a random database of the same size that would match the motifs as well as the sequence does and is equal to the combined p-value of the sequence times the number of sequences in the database. ... The score for the match of a position in a sequence to a motif is computed by by summing the appropriate entry from each column of the position-dependent scoring matrix that represents the motif. ... Sequence Name ...

Еще в разделе: (Показать все результаты (>6478) - kodomo.cmm.msu.ru/ )

... Advanced Screening by Similarity . ... Simple Query Form . Protein databanks: . ... Motif's length . threshold . Motif's power threshold . Alignment's power . ... of query sequence . End position of query sequence . ... Threshold of motif's . ... Threshold of alignment's . ... DNA/RNA Blosum 30 Blosum 50 Blosum 62 Dayhoff Johnson . ... Yes No . ... Sequence Alignment . ... Query sequence name . Enter or Paste here your Sequence without name OR Alignment . ...

Еще в разделе: (Показать все результаты (>181) - www.genebee.msu.ru/ )

• Screening of pattern or alignment against PROTEIN databank
• RNA secondary structure prediction
• Genebee Predicted Annotation - Advanced

Detection of short size mutations and copy number alterations in ultra-deep targeted sequencing data Valentina Boeva, Emmanuel Barillot, Institut Curie, valentina.boeva@curie.fr Jean-Francois Laes OncoDNA, jf.laes@oncodna.com The emergence of the amplicon sequencing technique, which followed whole exome sequencing, promises a revolution in cancer diagnostics and treatment. ... Visualization of the typical configuration of read mappings (with Integrative Genomics Viewer). ...

Еще в разделе: (Показать все результаты (>268) - mccmb.belozersky.msu.ru/ )

• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/244.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/136.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/197.pdf

... Полная версия этой страницы: Seven PhD student positions at the Division for Molecular and Condensed Matter Physics . Студенческий форум Физфака МГУ > Физфак и учеба > Аспирантура . ... You have an undergraduate education profiled towards molecular and condensed matter physics (or equivalent) and/or x-ray based methodologies, on an MSc-level. ... The position as a PhD student is limited to four years of full-time studies, five years if departmental work is included. ...

Еще в разделе: (Показать все результаты (>250) - wasp.phys.msu.ru/ )

• Seven PhD student positions at the Division for Molecular and Condensed Matter
• Студенческий форум Физфака МГУ > Ph.D and Post-Doc positions in chemical
• Студенческий форум Физфака МГУ > PhD position in Sheffield

Mustela . On a taxonomic position of the weasel (Carnivora, Mustela ) from the Cheju Island (South Korea) . ... The weasel from Cheju Island (formerly в?' Quelpart Island), which is situated in Korean Strait south of the coast of South Korea, was described as a separate species Lutreola quelpartis Thomas, 1908. ... Abramov A.V. 2000b. The taxonomic status of the Japanese weasel, Mustela itatsi (Carnivora, Mustelidae) // Zoologicheskii Zhurnal. ... A Pictorial Guide to the Mammals of Japan. ...

Еще в разделе: (Показать все результаты (>1116) - zmmu.msu.ru/ )

• Taxonomic position of Eptesicus bobrinskoi - abstract

... General Discussion >> Study >> PhD Student Position in Near-field Optics . ... PhD Student Position in Near-field Optics [ re: *NONE* ] . ... The School of Information and Communication Technology (ICT) at KTH, the Royal Institute of Technology in Stockholm announces one PhD Student position in Near-field Optics . Description of the position . ... Re: PhD Student Position in Near-field Optics [ re: Cezar ] . ... Re: PhD Student Position in Near-field Optics [ re: NePutin ] . ...

Еще в разделе: (Показать все результаты (>1114) - www.snto-msu.net/ )

• PhD Position University of Rouen - Public forum of MSU united student networks
• [k/a] Cost manager - startup position - Public forum of MSU united student
• Position for PhD study in Applied Mathematics/Math-Biology - Public forum of

... General Discussion >> Study >> PhD Student Position in Near-field Optics . ... PhD Student Position in Near-field Optics [ re: *NONE* ] . ... The School of Information and Communication Technology (ICT) at KTH, the Royal Institute of Technology in Stockholm announces one PhD Student position in Near-field Optics . Description of the position . ... Re: PhD Student Position in Near-field Optics [ re: Cezar ] . ... Re: PhD Student Position in Near-field Optics [ re: NePutin ] . ...

Еще в разделе: (Показать все результаты (>1766) - www.fds-net.ru/ )

• PhD student position in theoretical physics at LMU-Munich - Public forum of MSU
• PhD Position University of Rouen - Public forum of MSU united student networks
• Ph. D. student position in the Mesoscopic Research Group - Public forum of MSU

... Results . ... The main results of 2004 were the comparative analysis of genetic diversity of populations of saiga (Saiga tatarica). ... Molecular-genetic diversity and phylogeographic structure of moose population (Alces alces) in the different regions of European part of Russia and Ural were also studied. ... This testifies enough lengthy migrations of moose within the studied region and genetic unity of moose of Europe and Ural. ... Low genetic diversity of this species was determined. ...

Еще в разделе: (Показать все результаты (>3338) - www.sevin.ru/ )

• Экологический Форум - Фундаментальная Экология: GASPARRI, and According Kee
• Экологический Форум - Фундаментальная Экология: to be in a position to the
• Экологический Форум - Фундаментальная Экология: to become in a position to

This section contains information of how user agents should treat control characters and other special characters. ... There are 256 character positions in the Latin-1 encoding. ... It consists of the space character, 186 characters that form a subset of the graphic characters in ISO 6937/2 (1983), and four additional characters that are intended for inclusion in ISO 6937/2. ... Certain characters are taken to have special meaning within the context of an HTML document. ...

Еще в разделе: (Показать все результаты (>98) - comet.sai.msu.ru/ )

• Horizontal Tabs

... Next: Additional commands Up: Client Previous: Oscilloscope Contents Index . Photo Diode command of the start button menu calls window that shows position of laser beam on the photodiode and intensity of this beam. If your monitor is near the microscope it can be convenient to adjust photodiode looking in Photo Diode program window. ... Photo Diode window sensitivity wouldn't fell down with low beam intensity. ...

Еще в разделе: (Показать все результаты (>59) - www.spm.genebee.msu.ru/ )

• Adjusting sample table Z-position

... Bacteria rearranged . ... 2002) . ... Some improvements in Bacteria according Cavalier-Smith (2002b), Woese et al. (2000) and Wolf et al. 2001) . ... Several genera added (Patterson, 1999) . ... Cryothecomonas and Metopion moved (Kuhn et al., ... Major improvements and rearrangements to Protista (Stechmann, Cavalier-Smith, 2002; Cavalier-Smith, 2002; Cavalier-Smith, 2000) . ... Chaetognatha moved to Ecdysozoa, Nematomorpha to Nemathelminthes, Spiralia rearranged (Mallatt, Winchell, 2002) . ...

Еще в разделе: (Показать все результаты (>199) - herba.msu.ru/ )

... Data necessary to continue to the next screen : profiles from calibration wedges (two at least), profile of quiet sun, coordinates of the solar region and heliographic latitude of the center of the solar disk. ... Data necessary to continue to the next screen : position of two spectral lines for creating a dispersion curve ("dispersion curve" button), starting and ending x positions of continuum ("continuum" button) and starting and ending x positions of two regions for fitting ("fitting" button). ...

Еще в разделе: (Показать все результаты (>253) - lnfm1.sai.msu.ru/ )

... Ярмарка вакансий и стажировок для студентов и выпускников вузов . ... University of Groningen, The Netherlands . PhD Position available . ... PhD Position in Theoretical Chemistry . ... She is considered to be one of top 5 universities in Europe for research in Materials Science, Chemistry, Space Science, Microbiology, and Environment/Ecology. ... In 1993, the MSCplus was accredited by the Royal Netherlands Academy of Arts and Sciences (KNAW) as a leading Research School in Materials Science. ...

Еще в разделе: (Показать все результаты (>45) - www.physcareer.ru/ )

• A Ph.D. position, 2006, Finland / Вакансии / Physcareer.ru
• Office Manager (temporary position 09.07.07-23.07.07 / Вакансии / Physcareer.ru

... Hale Bopp: A Continuing Tail . ... Credit: Guido Pizarro, ESO Explanation: Where is Hale-Bopp now? ... Clearly the comet still has a substantial tail , blown by the solar wind , that points generally away from the sunward direction. ... After a swing through the outer solar system and the Oort cloud , Hale-Bopp will pass through the inner solar system again ... around the year 5400. ... Publications with keywords: tail - Comet Hale-Bopp . Publications with words: tail - Comet Hale-Bopp . ...

Еще в разделе: (Показать все результаты (>6813) - www.astronet.ru/ )

• Астронет > Hale Bopp: A Continuing Tail
• Waterton Lake Eclipse
• Kalamalka Lake Eclipse