... First, calculate percentages of amino acids in every column + contribution = 1.0 / len ( self . sequences ) + all_columns = [] + for position in range( len ( self )): + column _percentage = {} + for seq in self.body : + if self.body [seq][position] is not None : + aa = self.body [seq][position].code + else: + aa = None + if aa in allpy.data.amino_acids: + if aa in column _percentage.keys(): + ...

Еще в разделе: (Показать все результаты (>53119) - kodomo.fbb.msu.ru/ )

• allpy: 056f700b85fe lib/project.py
• allpy: ffc102ed0249 lib/project.py
• allpy: a49f40ace6a8 lib/project.py

... 3.0.9 - 3.0.18 only, PHP 4 >= 4.0.0) cpdf_import_jpeg -- Opens a JPEG image . int cpdf_import_jpeg ( int pdf document, string file name, float x-coor, float y-coor, float angle, float width, float height, float x-scale, float y-scale [, int mode]) . The cpdf_import_jpeg() function opens an image stored in the file with the name file name . ... The image is placed on the current page at position ( x-coor , y-coor ). ... The optional parameter mode determines the unit length. ...

Еще в разделе: (Показать все результаты (>2718) - oit.cmc.msu.ru/ )

• import_request_variables
• ibase_blob_import
• gzseek

... Distances between sequences . It is considered that the space, where all amino acids and sequences are analysed, is a metric one. ... When the distance between amino acids is entered, it is rather easy to consider such measure as pair distance between sequences in any position of alignment (in fact, this distance is just a distance between two amino acids). As distance is an additional quantity, pair distance between sequences on all alignment positions can be easily defined. ...

Еще в разделе: (Показать все результаты (>1677) - monkey.belozersky.msu.ru/ )

• About this project
• SDP home page
• Inquiry information || Parsimony algorithm

The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

Еще в разделе: (Показать все результаты (>7289) - mouse.belozersky.msu.ru/ )

• Geometrical core

... It interpolates the grid at the positions in the table and writes out the table with the interpolated values added as a new column. A bicubic [Default] or bilinear [ -Q ] interpolation is used, requiring boundary conditions at the limits of the region (see -L flag option). xyfile This is an ASCII [or binary, see -b ] file where the first 2 columns hold the (x,y) positions where the user wants to sample the 2-D data set. ... Default is 2 input columns]. -bo Selects binary output. ...

Еще в разделе: (Показать все результаты (>292) - xray.sai.msu.ru/ )

• http://xray.sai.msu.ru/~ivan/gmt/man/fitcircle.html
• http://xray.sai.msu.ru/~ivan/gmt/man/blockmedian.html
• http://xray.sai.msu.ru/~ivan/gmt/man/blockmode.html

... High-scoring Sequences . ... The E-value of a sequence is the expected number of sequences in a random database of the same size that would match the motifs as well as the sequence does and is equal to the combined p-value of the sequence times the number of sequences in the database. ... Sequence Name . ... Following the description line(s) is a line giving the length, combined p-value, and E-value of the sequence as defined in Section I. The next line reproduces the motif diagram from Section II. ...

Еще в разделе: (Показать все результаты (>6573) - kodomo.cmm.msu.ru/ )

This diagram illustrates the effects of absolutely positioning a box ("inner") with respect to a containing block established by a relatively positioned ancestor ("outer"). ... The "inner" box has been positioned relative to the top and left edges of the "outer" element's first inline box. ... The reference edges for positioning the "inner" box are indicated in the diagram by thick dashed lines. ... 1 Beginning of body contents.| ... 4 [(+200, -100)] 5 Inner 6 contents. ... Inner contents" is blue. ...

Еще в разделе: (Показать все результаты (>4336) - crydee.sai.msu.ru/ )

• Long description for example illustrating absolute positioning
• Long description illustrating absolute positioning with respect to the initial
• Long description of example illustrating table row height calculations and

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

Еще в разделе: (Показать все результаты (>146) - bioinf.fbb.msu.ru/ )

• SDPlight
• SDPpred
• SDPsite

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

Еще в разделе: (Показать все результаты (>34) - mouse.genebee.msu.ru/ )

... It is recommended that all lines of text be shorter than 80 characters in length. An example sequence in FASTA . ... Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, U and * are acceptable letters (see below). ...

Еще в разделе: (Показать все результаты (>178) - www.genebee.msu.ru/ )

• Genebee Predicted Annotation - Advanced
• RNA secondary structure prediction
• GeneBee BLAST 2.2.22+ Services Help

The QVBoxLayout class lays out child widgets in a grid. ... QGridLayout  ( QWidget * parent, int nRows, int nCols, int border=0, int autoBorder = -1, const char * name=0 )  . ... void  addWidget  ( QWidget *, int row, int col, int align = 0 )  . ... void  setRowStretch  ( int row, int stretch )  . ... QGridLayout takes the space it gets (from its parent layout or from the mainWidget ()), divides it up into rows and columns, and puts each of the child widgets it manages into the correct cell(s). ...

Еще в разделе: (Показать все результаты (>461) - rtm-cs.sinp.msu.ru/ )

• Qt Toolkit - QHeader Class
• Qt Toolkit - QRegExp Class
• Qt Toolkit - QPopupMenu Class

... Description . Catalog . ... In the Catalog, we publish equatorial (ЮБ 2000 , ЮД 2000 ) and galactic (l,b) coordinates of cluster centers derived as the position of overdensity in 2MASS catalog (Koposov et al. ... Distances, color-excesses and ages are the mean-square values calculated using all available evaluations from different color-magnitude diagrams. ... There are individual pages for every cluster where all available plots and parameters are published. ... 2002). ...

Еще в разделе: (Показать все результаты (>222) - ocl.sai.msu.ru/ )

... A regular expression (regex) is a powerful way of specifying a complex search. MySQL uses regular Henry Spencer's inplementation of regular expressions. ... MySQL uses the extended version. This is a simplistic reference that skips the details. To get more exact information, see Henry Spencer's regex(7) manual page that is included in the source distribution. ... A regular expression describes a set of strings. The simplest regexp is one that has no special characters in it. ...

Еще в разделе: (Показать все результаты (>246) - itpm.msu.su/ )

• A Description of NNTP

Multichannel Flare Spectrograph . ... phi - the angle between the green vertical line passing through the solar disk image and the violet radius vector "r" of the object located at the center of the spectrograph slit- red cross. positive - clockwise, negative - counterclockwise . ... mx = x coordinate of the coelostat main mirror . ... x : carthesian solar coordinate alog axis parallel to solar equator (in arcsec) . y : carthesian solar coordinate alog axis parallel to solar axis (in arcsec) ...

Еще в разделе: (Показать все результаты (>284) - lnfm1.sai.msu.ru/ )

Evalign . Evalign is a computerised evaluation method for protein sequence alignment algorithm. It compares computer alignments with structural alignments of protein sequences and tells how correct your sequence alignment program is. It gives additional information on the characteristics of different alignment algorithms and shows types specific failings in alignment. ... None . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

Еще в разделе: (Показать все результаты (>1535) - www.sai.msu.su/ )

• SAL- Other Scientific Fields - Chemistry, Biology Related - HMMER
• SAI Supernova catalog
• SAL- Other Scientific Fields - Chemistry, Biology Related - SC_rate

... Plugin Installation Instructions . ... WikiRing Consultants This plugin will help you to write readable markup (TWikiMarkup, HMTL, ...) within TWiki by allowing tags and arguments to be formatted on multiple lines. ... Basically, there are two ways of glueing and recombining lines by either removing all whitespaces between two lines using %*~~ or by removing all whitespaces and separateing lines with a single space using %~~~ . ... lib/TWiki/Plugins/GluePlugin.pm . ... TWiki:Plugins/GluePlugin . ...

Еще в разделе: (Показать все результаты (>38616) - dualopt1.cmm.msu.ru/ )

• GluePlugin - TWiki - TWiki - (printable)

... Postdoctoral research position in heterogeneous catalysis is available in the International Joint Research Lab for Ecoefficient Products and Processes (E2P2L) which is joint research center between Solvay and French National Center for Scientific Research in Shanghai (http://www.e2p2l.com). ... International Joint Research Lab for Ecoefficient Products and Processes (E2P2L) is joint research center between Solvay and French National Center for Scientific Research in Shanghai (http://www.e2p2l.com). ...

Еще в разделе: (Показать все результаты (>37) - www.chemport.ru/ )

Электронная библиотека Попечительского совета . ... Robbins J.N. - Web Design in a Nutshell . ... Название: Web Design in a Nutshell . Автор: Robbins J.N. Аннотация: . ... Our popular reference, Web Design in a Nutshell, is one of the first books to capture this new web landscape with an edition that's been completely rewritten and expanded to reflect the state of the art. ... Multimedia: Web audio, video, Flash, and PDF . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

Еще в разделе: (Показать все результаты (>6064) - lib.mexmat.ru/ )

• Bluttman K. - Access Hacks: Tips Tools for Wrangling Your Data :: Электронная
• Fitzgerald M. - Learning XSLT :: Электронная библиотека попечительского совета
• Поиск книг, содержащих description (окружение) :: Электронная библиотека

the GNU General Public License v2 # $Id$ EAPI=5 QT5_MODULE= qtlocation inherit qt5-build DESCRIPTION= Physical position determination library for the Qt5 framework if [[ ${QT5_BUILD_TYPE} == release ]]; then KEYWORDS= amd64 arm ~hppa ppc64 ~x86 fi # TODO: src / plugins / position /gypsy IUSE= geoclue qml RDEPEND = ~ dev-qt /qtcore-${PV} geoclue ? ( app-misc/ geoclue :0 dev-libs/glib:2 ) ...

Еще в разделе: (Показать все результаты (>44560) - mirror.msu.net/ )

• http://mirror.msu.net/pub/gentoo-portage/dev-python/importing/importing-1.10.ebuild
• http://mirror.msu.net/pub/gentoo-portage/dev-python/colorama/colorama-0.3.6-r1.ebuild
• http://mirror.msu.net/pub/gentoo-portage/dev-python/colorama/colorama-0.3.7.ebuild

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... When detection of the change-points in alpha band power was performed as in the previous subsection, more than one change-point per second was obtained in average. ... The hypothesis of the hierarchy of EEG segmental descriptions (Kaplan 1998) (see subsection 7.3.2) is a theoretical reason for introducing the adjustment of the change-point detection probability. ...

Еще в разделе: (Показать все результаты (>47) - brain.bio.msu.ru/ )

• Nonparametric approaches to the description of EEG piecewise stationary
• EEG Database - Schizophrenia