... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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... Distances between sequences . It is considered that the space, where all amino acids and sequences are analysed, is a metric one. ... When the distance between amino acids is entered, it is rather easy to consider such measure as pair distance between sequences in any position of alignment (in fact, this distance is just a distance between two amino acids). As distance is an additional quantity, pair distance between sequences on all alignment positions can be easily defined. ...

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• Example of supporting positions
• SDP home page
• About this project

... 6 import sequence . ... 19 * self.alignment -- alignment object, which the block belongs to . ... 22 * self.positions -- list of positions of the alignment.body that . ... 34 def __init__ ( self , alignment , sequences = None , positions = None ): . ... sequences : . ... 75 If more than one pdb chain for some sequence provided, consider all of them . ... 129 alignment_sequence = self . ... 130 return ( alignment_sequence [ i ] for i in self . ... 132 def ca_atoms ( self , sequence , pdb_chain ): . ...

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• allpy: b2ec17578145 lib/block.py
• allpy: 6dfc736f37a9 lib/block.py
• allpy: 117b03ee9e8f allpy/block.py

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPpred
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... The results will be also sent to you via E-MAIL to address: sherlock1991@rambler.ru . ... BRAJA MATITAAMVKDLRESTGAGMMDCKAALTENDGNMEAAQDWLRKKGLSKAA BURCA MAAITASMVAELRAKTDAPMMECKKALTEADGDLAKAEELLRVKLGNKAS RALPJ MAAITASMVAELRAKTDAPMMECKKALTEAEGNLEKAEEILRVKLGNKAG VIBCH -MAVTAALVKELRERTGAGMMECKKALVETNGDIELAIENMRKSGAAKAA VIBFM MATVTAALVKELRERTGAGMMECKKALVEANADIELAIENMRKSGAAKAA ECOLI MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAA PROMH MSGITAALVKELRERTGAGMMECKKALVEANGDIELAIDNMRKSGQAKAA ...

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. Next: Initial velocity Up: Space and velocity distributions Previous: Space and velocity distributions . Following Paczynsky (1990), we assume initial space distribution of young neutron stars to be varying exponentially with distance from the Galactic center and from the Galactic plane, that is probability distribution for young neutron star positions can be written in the form . with kpc, and pc. Mike E. Prokhorov . Fri Jul 19 19:16:07 MSD 1996

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... HELP ON SCREENING OF PATTERN OR ALIGNMENT AGAINST PROTEIN PROTEIN . ... The method of looking for all pattern entries (possibly inexact) in PROTEIN databank is almost the same as in PROSITE screening procedure. ... The screening by query alignment, based on the same principle: the alignment is seen as a pattern defining letter's frequencies in every position. The pattern example: . ... the only one capital letter at a position means that only given residue should be at the position. ...

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• Screening by similarity
• RNA secondary structure prediction
• Genebee Predicted Annotation - Advanced

Positioning of Nucleosomes at DNA Containing Short Periodic Sequences A.P Lifanov1,3, V.J. Makeev1,2, N.G. Esipova 1 2 1 V.A. Engelhardt Institute of Molecular Biology, Moscow, Russia Vavilov Institute of General Genetics, Moscow, Russia 3 johnnie_me@list.ru Nucleosome distribution, alongside with histone modifications and RNA polymerase II (Pol II) occupancy shows preferential association with exons ( ... Histogram of relative positions of nucleosome and exon borders is shown in Fig. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/149.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/156.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/66.pdf

This diagram illustrates the effects of absolutely positioning a box ("inner") with respect to a containing block established by a relatively positioned ancestor ("outer"). ... The "inner" box has been positioned relative to the top and left edges of the "outer" element's first inline box. ... The reference edges for positioning the "inner" box are indicated in the diagram by thick dashed lines. ... 1 Beginning of body contents.| ... 4 [(+200, -100)] 5 Inner 6 contents. ... Inner contents" is blue. ...

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• Dynamic HTML in Communicator
• Long description for example illustrating absolute positioning
• Long description illustrating absolute positioning with respect to the initial

Evalign . Evalign is a computerised evaluation method for protein sequence alignment algorithm. It compares computer alignments with structural alignments of protein sequences and tells how correct your sequence alignment program is. It gives additional information on the characteristics of different alignment algorithms and shows types specific failings in alignment. ... None . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

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• APOD: May 13, 1997 - Optical Transient Near GRB970508 Shows Distant Redshift
• SAL- Other Scientific Fields - Chemistry, Biology Related - SC_rate
• CGFA- Sir Anthony van Dyck: Charles I in Three Positions

... PHP 4 >= 4.0.0) swf_polarview -- Define the viewer's position with polar coordinates . void swf_polarview ( float dist, float azimuth, float incidence, float twist) . ... The dist parameter gives the distance between the viewpoint to the world space origin. The azimuth parameter defines the azimuthal angle in the x,y coordinate plane, measured in distance from the y axis. The incidence parameter defines the angle of incidence in the y,z plane, measured in distance from the z axis. ...

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• dio_seek
• substr
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... Форумы > Аспирантура > Тема . ... PhD position in the University of Florida . PhD position is available in the department of Industrial and Systems Engineering, University of Florida. ... Risk Management and Financial Engineering Lab website: http://www.ise.ufl.edu/rmfe/ . ... Statistical estimation in terms of factor models can be tuned to risk preferences in order to achieve better performance when applied to portfolio optimization. ... University of Florida, November 2011. ...

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• MMOnline | Форумы | Аспирантура | PhD positions in logic and AI, Vancouver
• MMOnline | Форумы | Аспирантура | Phd positions at the Max-Planck Institute for
• MMOnline | Форумы | Аспирантура | PhD position at the University of Geneva,

... Argos + GPS positions Data provided Improving Location Conclusion: getting better locations Doppler effect f < f0 f0 f > f0 Apparent frequency shift observed as the receiver is moving Relative motion between transmitter and receiver TX f0 Doppler effect Doppler effect : Each Message Received Tells us the Tag is somewhere on a CТne ity Satellite veloc A s xi ta pt ellit te sa Some geometry : intersection between a plan and a conic surface Intersection with Altitude Sphere: Two Solutions!! ...

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• Экологический Форум - Фундаментальная Экология: to become in a position to
• Экологический Форум - Фундаментальная Экология: to be in a position to the
• Экологический Форум - Фундаментальная Экология: a In Chinese bus. position

... Investigations of the electrical properties of PbSnTeS, PbSnTeSe, and PbSnSeS solid solutions confirmed an earlier hypothesis that the positions of the tin atoms were off-center and that the tunnel motion of these atoms were suppressed in the anion sublattice. ... Other works on off-center impurities ...

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... Полная версия этой страницы: Ph.D and Post-Doc positions in chemical engineering . Студенческий форум Физфака МГУ > Физфак и учеба > Аспирантура . ... Ph.D. position: . ... We have several ongoing research projects funded with openings for motivated students interested in pursuing a Ph.D. Research focuses on the molecular modeling of polymeric materials, including both synthetic polymers and biological networks, such as actin filaments, intermediate filaments, microtubules and collagen. ...

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• Студенческий форум Физфака МГУ > PhD position in Sheffield
• Студенческий форум Физфака МГУ > PhD positions in Switzerland
• Студенческий форум Физфака МГУ > MSc/PhD positions in the Optical Sensors for

... 1 20 A E (h) = - 12 h 2 10 Force/Radius 2 2 exp(-h) E ( h) 0 -10 10 20 30 40 Distance : 1. ... SFA x m Radial distance , r (µm ) -80 - 40 0 0 40 J.N.Connor,PhD thesis, University of South Australia, 2001 80 t0 + 16 s t0 + 8 s 200 t0 + 4 s t+2s 0 t0 + 1 s t0 + 0.5 s 400 t0 + 0.08 s 600 time = t0 Approach speed 50 µm /s D (nm ) 800 Undeformed drop shape (far from contact) 1000 900 800 700 600 1000 900 800 700 600 h (nm) 0 5 10 t (s) 15 20 h (nm) 500 400 300 200 100 0 500 400 300 200 ...

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• http://poly.phys.msu.ru/ru/seminar/vms/25092001/seminar250901.pdf
• Seminar in Polymer Physics
• SERGEI SAVELIEVICH ABRAMCHUK

. [ Войти ] . Главная -> Фильмы -> Various Positions . Пользователи . Демо . Деньги . Фильмы . Форум . Various Positions . Канада 2002 . отметить . Мелодрама . Комедия . Драма .

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• Assume the Position 201 with.. - Фильмы - Kinfo.ru
• Assume the Position with Mr... - Фильмы - Kinfo.ru
• Compromising Positions - Фильмы - Kinfo.ru

Электронная библиотека . ... Главная Ex Libris Книги Журналы Статьи Серии Каталог Wanted Загрузка ХудЛит Справка Поиск по индексам Поиск . ... Поиск по указателям . Результат поиска . Книга . Страницы для поиска . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Bao-Yen Tsui J. - Fundamentals of Global Positioning System Receivers: A
• Moeller T.B. - Magnetic Resonance Imaging, Parameters and Positioning ::
• Nyce D.S. - Linear position sensors: theory and application :: Электронная

... General Discussion >> Study >> PhD Student Position in Near-field Optics . ... PhD Student Position in Near-field Optics [ re: *NONE* ] . ... The School of Information and Communication Technology (ICT) at KTH, the Royal Institute of Technology in Stockholm announces one PhD Student position in Near-field Optics . Description of the position . ... Re: PhD Student Position in Near-field Optics [ re: Cezar ] . ... Re: PhD Student Position in Near-field Optics [ re: NePutin ] . ...

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• PhD Position University of Rouen - Public forum of MSU united student networks
• [k/a] Cost manager - startup position - Public forum of MSU united student
• Position for PhD study in Applied Mathematics/Math-Biology - Public forum of