Dataset and Motifs . ... Motif Diagrams . ... The E-value of a sequence is the expected number of sequences in a random database of the same size that would match the motifs as well as the sequence does and is equal to the combined p-value of the sequence times the number of sequences in the database. ... Following the description line(s) is a line giving the length, combined p-value, and E-value of the sequence as defined in Section I. The next line reproduces the motif diagram from Section II. ...

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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• SDPpred

... file . ... Previously, fileio received the alignment torn-apart into sequence representations as strings with gaps, sequence names and descriptions. ... 8 def __new__ ( cls , file , format = "fasta" , ** kw ): . ... 17 def __init__ ( self , file , format = 'fasta' , gaps = '-' , wrap_column = 70 ): . ... name , self . ... 39 def write_string ( self , string , name , description = '' ): . ... 83 def fix_sequences ( self , sequences ): . ... 85 for name , description , sequence in sequences : . ...

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• allpy: a1307c0bb030 allpy/fileio.py
• allpy: README.devel annotate
• allpy: Makefile annotate

... PHP 4 >= 4.1.0) fbsql_db_status -- Get the status for a given database . int fbsql_db_status ( string database_name [, resource link_identifier]) . Returns: An integer value with the current status. fbsql_db_status() requests the current status of the database specified by database_name . ... FBSQL_UNKNOWN - The Status is unknown. FBSQL_STOPPED - The database is not running. ... FBSQL_NOEXEC - FBExec is not running on the server and it is not possible to get the status of the database. ...

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• udm_set_agent_param
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Modules | ... Apache HTTP Server Version 2.0 . ... Provides for user authentication using DBM files . ... This module provides for HTTP Basic Authentication, where the usernames and passwords are stored in DBM type database files. ... Combining Group and Password DBM files: In some cases it is easier to manage a single database which contains both the password and group details for each user. ... This program can be used to create and update DBM format password files for use with this module. ...

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• MySQL Reference Manual for version 3.23.10-alpha. - H Description of MySQL
• mod_auth - Apache HTTP Server
• Relevant Standards - Apache HTTP Server

Modules | ... Apache HTTP Server Version 2.0 . ... Provides for user authentication using DBM files . ... This module provides for HTTP Basic Authentication, where the usernames and passwords are stored in DBM type database files. ... Combining Group and Password DBM files: In some cases it is easier to manage a single database which contains both the password and group details for each user. ... This program can be used to create and update DBM format password files for use with this module. ...

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• DVARP
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... Russian Pages . CDFE: Home Page . ... Numerical data, graphics, and bibliography . ... description] . Last updated: May 6th, 2014 . ... Last updated: June 15th, 2011 . ... Last updated: . ... Last updated: April 4th, 2015 . ... Last updated: February 25th, 2016 . ... Last updated: September 27th, 2011 . ... Photonuclear Data Index since 1955 . ... Last updated: September 15th, 2015 . ... Last updated: March 22th, 2010 . ... Last updated: March 19th, 2015 . ... Last updated: May 15th, 2002 . ...

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• CDFE => Online Services
• Wave Function Value Database
• CDFE => Online Services => Nuclear Reaction Threshold and Energy Values

... Peptide Sequence Databases . ... BLAST searches can be limited to the results of an Entrez query against the database chosen. ... For example: Mus musculus[Organism] For help in constructing Entrez queries please see the " Writing Advanced Search Statements " section of the Entrez Help document. ... Only following combinations of the Matrix, Open & Extended Gaps are available: Recomended combinations are colored. ... Gap . ... Standard BLAST alignment in pairs of query sequence and database match. ...

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• GeneBee BLAST 2.2.8 Services Help
• Databases
• GeneBee Basic BLAST 2.0

... Data . ... Services . ... Solar energetic particles . ... N -d SW Conditions : Time profiles of the key geomagnetic ( Ap and Dst indices), solar wind (velocity V , density n and temperature T ) and IMF ( B , Bx , By , Bz in GSM) parameters observed in the N day vicinity of the geomagnetic disturbed day. N -d Map of Solar Events : Map of solar surface events occurred within N day vicinity of the moment when the solar wind expansion (which causes the geomagnetic event) started. ... WIND . ...

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• Space monitoring data center

... Siberian Lang . Minority languages of Siberia as our cultural heritage . ... The project ?Development of the web-site ?Minority languages of Siberia as our cultural heritage? (on the material of the languages of the basin Middle Yenisei and the Middle and the Upper Taz)? was realized at the Laboratory for Computational Lexicography, Research Computing Centre, Lomonosov Moscow State University, with financial support from Russian Foundation for the Humanities, grant 12-04-12049.љ ...

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