... wLake 1.7 . wLake is a tool which allows to identify clusters of a structural water molecules in given superimposed 3D structures. Put your coordinates in PDB format into the text area. Select a distance threshold. Two water molecules from different structures will be concidered as located in the same space point if the distance between centers of oxygen atoms is less than this threshold. ... EACH STRUCTURE INCLUDING ITS WATER MOLECULES MUST BE PRESENTED AS SEPARATE MODEL: EXAMPLE. ...

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. A system for analysis of information structure of programs. Stefanov C.S. An autonomous system for analysis of information structure of programs is described. The system is intended for adaptation of sequential programs for running on parallel computing systems. PostScript (in Russian) (72.1MB) . PDF (in Russian) (1.16MB) . PostScript. zip (in Russian) (2.66MB) . PDF. zip (in Russian) (1.02MB) . Stefanov C.S. e-mail: cstef@parallel.ru

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• "The MEL program for the atomistic modeling of functional layers in solar...

... We consider now change-points in different components of the frequency spectrum of typical EEG signal. ... Only few change-points in power are found in the initial EEG (unless a prominent alpha rhythm is present). ... Change-points in different frequency components of the EEG . ... Change-points in different types of the EEG alpha activity without substantial gradual changes . ... As can be seen from Fig. 7.3, the program reliably detected the change-points despite of such variety of signal patterns...

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• Other prospects of the change-point based analysis
• Unsolved problems and new prospects
• Change-points at different levels of the hierarchy of EEG segmental...

Alchemize . Alchemize is an interactive/batch program used to convert structured and unstructured surface and volume grids between various file formats. Alchemize can be executed in an interactive mode which will prompt for the necessary information to perform the conversion, or in batch mode which can be executed from a script. ... Home Site: . ... Available Binary Packages: . ... SAL Home | Numerical Analysis | Discrete Methods Related Tools . ... SAL@KachinaTech.COM . ...

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• SAL -- Scientific Applications on Linux -- New Items Added in 2000/03 and
• SAL- Office Software - Typesetting Formating
• SAL- Other Scientific Fields - Physics Astronomy - SIMREF

Russian abstract] . Russian full text] . The classifications revealed by geometric morphometry and classical morphometry for Drosera rotundifolia , D. obovata , D. anglica and D. linearis were compared. ... the form of petiole middle part transverse section is the effective distinguishing character for the some different species and inter-species hybrids of Drosera ; . the consensus configurations are preferable for the geometric morphometry analysis of populations. ...

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... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Notes on searching by similarity
• Screening protein sequence against PROSITE databank
• Screening of pattern or alignment against PROTEIN databank

Электронная библиотека Попечительского совета . ... Royer J.S. - A Connotational Theory of Program Structure . ... Название: A Connotational Theory of Program Structure . Автор: Royer J.S. Аннотация: . ... The theory features a simple, natural notion of control structure which is much broader than in other theories of programming languages such as denotational semantics and program schemes. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Mulkers A. - Live Data Structures in Logic Programs: Derivation by Means of
• de Floriani L. - Shape Analysis and Structuring :: Электронная библиотека
• G?nther A. - Large-scale Structures in Rayleigh-Benard Convection and Flow Over

DVM-system of parallel program development . Goals and structure . ... 2.1 C-DVM and Fortran DVM parallel program development . ... Using C-DVM and Fortran-DVM languages a programmer deals with the only version of the program both for sequential and parallel execution. ... These rules are syntactically organized in such a manner that they are "transparent" for standard C and Fortran compilers and doesn't prevent DVM-program execution and debugging on workstations as usual sequential program. ...

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• DVM debugger. Detailed design. Part 4
• Prefictor of DVM-program performance. User's guide

Fortran is a simple language . Fortran has always existed . Fortran compilers are generally available . Earlier the first programming language . ... Good at numerical analysis and technical calculations . ... A large number of programs and routines in Fortran are exchanged internationally . ... Fortran doesn't have reserved words, it has short identifiers, the identifiers do not have to be specified . ... Fortran programs are usually less well structured then Pascal programs . ...

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• Heliophysics, Internal structure and seismology
• The historical development of Fortran
• Format

S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• About this project
• S publications
• About authors ot this complex

... Computer software has been developed for crystal chemistry analysis of arrangement of molecules in organic crystals on the basis of concepts worked out in the studies conducted by P.M.Zorky et al. ... The standard crystal chemistry analysis includes: . ... Constructing various graphic representations of the crystal structure and of its fragments, which clearly demonstrate arrangement of molecules, in particular, constructing representations of the most close molecule-molecule contacts. ...

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• Analysis of the structure of foam graphite by optoacoustic spectroscopy and
• Moscow University Chemistry Bulletin Vol. 42, No. 2, P. 95 (2001)
• A study of photosensitizers by ODMR (optically detected magnetic resonance)

Databases (NSDC) of the Natural Planetary Satellites. ... NSDC: Database of astrometric observations of Natural Planetary Satellites . ... They are thoroughly looking for observations in different sources, creating their owndatabases which are then mostly inaccessible to other researchers. ... In the file "content" with explications, the reference is given to the data source as well as the bibliographic reference. ... Data sources. ... Why a specific bibliographic database for Natural satellites? ...

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• Y.Kupryakov, SAI, MSU
• Leonid Zotov

... PbTe, SnTe, GeTe and their solid solutions are narrow-gap semiconductors widely used in infrared optoelectronics and for thermoelectric energy conversion. ... The present work is a continuation of recent EXAFS studies performed at the NSLS on GeTe, SnTe and PbTe crystals doped with high concentration of indium (10-35 at.% ... The studied samples were PbTe, SnTe and GeTe doped with 1.5-2% of indium along two sections (InTe and In 2 Te 3 ) of the phase diagrams. ... Results of data analysis. ...

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... Results . ... Functional scheme of information flows under model studies of biosystems structure. ... Members of the group together with other Institutes of the RAS and departments of different Ministries (Education and Sciences, Natural resources and Agricultural) have created the pilot versions of the basic WEB-oriented information systems, which are actively used by many users in the global net of Internet. ...

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• Scientific programs and projects: Evaluation of consequences of influences
• Laboratories: Laboratory of population ecology: Goals and Tasks
• Scientific programs and projects: Projects and programs (at a period

Maximum RPM: Taking the Red Hat Package Manager to the Limit . ... Creating Subpackages . ... If all the software in the world followed the usual "one source, one binary" structure, there would be no need for subpackages. After all, RPM handles the building and packaging of a program into a single package file just fine. ... By using subpackages, there's no need to maintain separate spec files and endure the resulting headaches when new versions of the software become available. ...

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• rotatelogs - Piped logging program to rotate Apache logs - Apache HTTP Server
• htdbm - Manipulate DBM password databases - Apache HTTP Server

... Development of a computer-based information system for Russian folklore studies . Computer systems SKAZKA and SKAZKA-2 are developing by A.V. Rafaeva. The aim of this work is to make program tools for structural analysis of folktale plots and motives. ... 112 – 113; Rafaeva A.V. Analiz rodstvennykh otnoshenij s pomosh’ju sistemy SKAZKA (Analysis of Relate Terms with the Help of SKAZKA Program) // Problemy kompjuternoj lingvistiki: Sbornik nauchnykh trudov, 1. ...

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Assessment of applicability of the program Rosetta for the determination of membrane associated proteins structure. M1 influenza virus protein E.N. BOGACHEVA*, A.L. KSENOFONTOV**, A.V. SHISHKOV* N.N. Semenov Institute of Chemical Physics Russian Academy o f Sciences, ul. ... We analyzed the structure of the M1 protein of the influenza virus A/Puerto Rico/8/34 (H1N1) strain in acidic solution using tritium planigraphy [2, 3]. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/172.pdf
• Program of MCCMB'05
• MCCMB'15

... Structure, properties, and probable physiological role of small heat shock protein with molecular mass 20 kD (Hsp20, HspB6). ... This review is devoted to critical analysis of data concerning the structure and functions of small heat shock proteins with apparent molecular mass 20 kD (Hsp20). We describe the structure of Hsp20, its phosphorylation by different protein kinases, interaction of Hsp20 with other small heat shock proteins, and chaperone activity of Hsp20. ...

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• Effect of mutations in the beta5-beta7 loop on the structure and properties of
• Biochemistry Department of Moscow State University | Regulation of muscle
• Effect of mutations mimicking phosphorylation on the structure and properties

Study of jet transverse structure with CMS experiment at 10 TeV Natalia Ilina (ITEP, Moscow) for the CMS collaboration CMS PAS QCD-08-002 (2009) 1 LOMONOSOV09, MSU, Moscow 24/08/2009 Outline 1. ... 7 LOMONOSOV09, MSU, Moscow 24/08/2009 Monte Carlo predictions HERWIG++ Particle level Jet transverse structure for all jets (black lines) depends on while it does not depend on for gluon and quark jets. ...

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• http://nuclphys.sinp.msu.ru/conf/lpp14/210809/Peshekhonov.pdf
• http://nuclphys.sinp.msu.ru/school/s08/s08_39.pdf

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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• Align tool for DNA-protein complexes
• StructAlign help