Projects . ... Modeling the tmRNA structure in the ribosome . For modeling of the tmRNA-2 structure in the ribosome we used the published ribosome X-ray structure with a defined mRNA path (Yusupova et al, 2006). ... Since the arch consisting of tmRNA pseudoknots and helices was observed by cryo-EM in the pre-initiation complex (Valle et al, 2003) as well as in the tmRNA-4 complex described here, we suggest that such a structure should be present at all steps of the tmRNA path through the ribosome. ...

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... The results of recent developments on modelling of supramolecular ordering and macroscopic properties of molecular liquids and mixtures are reviewed. ... The hierarchy of theoretical models of molecular aggregates is considered. The nonideal mixture of molecular aggregates, polyvariant as regards structure and composition, is discussed. ... Macroscopic manifestations of supramolecular ordering in a set of the physicochemical properties of molecular liquids and mixtures are discussed. ...

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• Molecular mechanics force field based on Gillespie-Kepert model: application to
• Ar-I2 Interactions: the Models Based on the Diatomics-in-Molecule Approach
• Supermolecular Structure on and Physico-chemical Properties of Liquid Systems.

... Applications of Molecular Mechanics to Metal Complexes" . ... Molecular mechanics study of the mixed-ligand lanthanide complexes using Gillespie-Kepert model . ... Within MM-GK, the same parameters are applicable to complexes of different coordination numbers/polyhedra. ... Gillespie-Kepert model . ... Using derived computational parameters, we calculated the geometry of 39 lanthanide ion nonaaqua complexes, 6 octaaqua complexes and 18 beta- diketonate and aqua-beta-diketonate complexes. ...

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• Study of amino- and pyridyl-containing zinc(II) and cadmium(II) complexes by
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Moscow State University Belozersky Institute of Physico-Chemical Biology . Department of Electron Microscopy is a sub-division of A.N. Belozersky Institute of Physico-Chemical Biology . ... We are interested of how eukaryotic cell is organized, formed and functioned. Since A.N. Belozersky Institute of Physico-Chemical Biology is one of the scientific departments of Moscow State University ? ... Understanding the metaphase chromosome architecture remains a basic challenge in cell biology. ...

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... CompHEP Models. ... CompHEP is based on an idea of the physical model. ComHEP Models are very simular to physical models in high energy physics, like Standards Model or MSSM. ... Two of them are versions of the Standard Model (SU(3)xSU(2)xU(1)) in the unitary and t'Hooft - Feynman gauges. ... Standard Model in Feynman gauge . ... This output can be written in LaTeX format and in the form of CompHEP model files, which allows one to start calculations of processes in the new physical model. ...

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• extra:model:main [CompHEP]
• download:rn-031116 [CompHEP]

In our model for RNA secondary structure formation we assume that each of the candidate helices (see definition in the main text) may exist in two states. A helix can be completely zipped, or it can be completely decayed. ... The following schema is used to estimate the effective transition constants between zipped and decayed states: . ... To determine the kinetic constants, we use the transition state theory, which is often used in chemical kinetics (Figure 2). ... Transition . ...

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• RNA Kinetics main page
• SDPsite - Algorithm Format requirements

... research . ... I'm a postdoc in the group of Mathematical Modelling , Institute for Chemistry and Biology of the Marine Environment (ICBM), . University of Oldenburg, 26129 Oldenburg, Germany . ... a.ryabov@icbm.de . ... Research Associate . ... Nonlinear Dynamics Group . ... Nonlinear Dynamics & Chaos Group . Moscow State University . ... Ph.D. in Nonlinear Dynamics, Moscow State University . ... Diploma work in Statistical Physics, Moscow State University . ... б©2009 Ryabov Alexey | ...

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• Activities

... In this poster we propose a hypothesis that within fixed assumptions about internal physics (opacity, thermodynamics, nuclear reactions) a strict relation between the surface helium abundance and the entropy of the adiabatic part of the convective zone exists for all solar models. This hypothesis is verified with models under simplified physics (Christensen­Dalsgaard 1988) and with six evolutionary models computed by Christensen­Dalsgaard (1992). ... 1990, Christensen­Dalsgaard 1991). ...

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• Dynamic HTML in Communicator
• Program of course
• Publication List

... Glossary of the laboratory-chair . ... Institute Laboratory-Chairs . ... Laboratory-chair of modelling the natural references of time . ... All natural systems are considered as hierarchic systems. ... These flows are called generating flows. ... The union of all sets of elements of a system's generating flows is considered as its space or medium. ... The formation, or the course of time, in systems is considered as changing the amount of substance of some generating flows in these systems. ...

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• Russian Interdisciplinary Temporology Seminar

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... It is necessary to note that a change-point detection method which we applied to a real EEG signal was developed on the basis of the piecewise stationarity model of the signal. ... The data presented in this Chapter demonstrate that the effective detection of the change-points opens the way for a number of new methods of the analysis of complex signals such as the EEG. ...

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• Parametric segmentation of the EEG

University Satellites and . Space Science Education . ... Simulation of Code and Doppler GPS & GLONASS Observables and Feasible Positioning Algorithms for Universitetskiy-Tatyana Satellite . ... Algorithms of complex processing can give more accurate navigational results than algorithms which use observables of GPS only or GLONASS only. ... The algorithm of the modeling of observables has several steps. ... Skobeltsyn Institute of Nuclear Physics, Moscow State University, 2005-2006 . ...

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Schedule : Nonlinearity of Media and Structures, Nonlinear Testing . ... Guyer R. (invited) . ... Esipov I. B. Nonlinear Sound Wave Propagation in 2-D Hysteretic Medium . ... Berndt T. P. Simultaneous Probing of the Nonlinear Effect of a Plane Unbonded Interface on Incident Longitudinal and Shear Acoustic Waves as a Function of Amplitude and Pressure . ... R. E. (invited) . ... Korobov A. I. Influence of Internal Structure of Polycrystalline Copper on Its Nonlinear Elastic and Acoustic Properties . ...

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• Nonlinearity of Media and Structures, Nonlinear Testing
• Abstract
• Nonlinear Acoustics of the Atmosphere, the Ocean, and the Earth

.

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... Quaternary structure of human small heat shock protein HSPB6 (Hsp20) in crowded media modeled by trimethylamine N-oxide (TMAO): Effect of protein phosphorylation. ... Effect of trimethylamine N-oxide (TMAO), well-known osmolyte, widely used to imitate crowded intracellular conditions, on the quaternary structure of recombinant human small heat shock protein HspB6 (Hsp20) was analyzed by means of size-exclusion chromatography, chemical crosslinking and analytical ultracentrifugation. ...

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• Oxidative stress induced in rat brain by a combination of 3-nitropropionic acid
• Effect of mutations in the beta5-beta7 loop on the structure and properties of
• Heterooligomeric complexes formed by human small heat shock proteins HspB1

Large-scale QC modeling using PC GAMESS package. ... PC GAMESS vs. ... Modeling of large systems linear scaling methods for HF, DFT , CIS, TDHF, and TDDFT Linear scaling methods , current status Fast linear scaling Coulomb (J matrix) assembly via QFMM and near-field J engine State-of-the-art grid-based ExchangeCorrelation integration for linear scaling DFT and TDDFT State-of-the-art linear scaling HF exchange (K matrix) assembly for HF, hybrid ...

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• The PC GAMESS SMP scaling results for model MP4-SDQ job

... Class . ... FIELD | ... class BackgroundTableCellRenderer . ... Nested classes inherited from class javax.swing.table.DefaultTableCellRenderer . ... Nested classes inherited from class java.awt.Component . ... Fields inherited from class javax.swing.table.DefaultTableCellRenderer . ... Fields inherited from class javax.swing.JLabel . ... Fields inherited from class javax.swing.JComponent . ... Fields inherited from class java.awt.Container . Fields inherited from class java.awt.Component . ...

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Another mechanical model of parametrically excited pendulum and stabilization of its inverted equilibrium position Anton O. Belyakov 1 Lomonosov Moscow State University 2 Vienna University of Technology 8th European Nonlinear Dynamics Conference (ENOC 2014) Vienna, July 7, 2014 Scheme of a parametric pendulum y O l (t ) - g m 2 r1 + m 2 Equations of motion mr 2 1 d d2 + c1 + m g l (t ) sin () = 0 dt 2 dt (1) Dimensionless equation Three dimensionless parameters and ...

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• Anton O. Belyakov

... The traditional answer to this question is unequivocal: тАЬno, public scholarship cannot and should not exist.тАЭ To popularize knowledge is to simplify, and simplification risks the loss of nuance and complexity, the very essence of scholarly knowledge. ... The public sphere can know but a distorted version of scholarly knowledge. ... You need JavaScript enabled to view it. (with Summer School-2016 in the subject line) before April 25, 2016. ... Summer School Archives . ...

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HOW DOES CRYSTAL CHEMISTRY PREDICT STRUCTURE AND PROPERTIES OF CRYSTALS V. S. URUSOV Crystal chemistry has created a set of methods and procedures to predict structure and properties of crystals. ... З. л. мкмлйЗ еУТНУ,ТНЛИ ,,УТЫ ТЪ,ВММњИ ЫМЛ,В ТЛЪВЪ ЛП. е.З. гУПУМУТУ, ї м ЫТУ, З.л., 1997 . ... мкмлйЗ З.л. дДд дкалнДггйпаеаь икЦСлдДбхЗДЦн лнкмднмкм.. ... 1 мкмлйЗ З.л. дДд дкалнДггйпаеаь икЦСлдДбхЗДЦн лнкмднмкм а лЗйвлнЗД дкалнДггйЗ 43 . ... Ti4+ 2 -, 1 : 2 , . 2 --2 - Ti4+-Ti4+) , (2 --Ti4+). ...

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• http://cryst.geol.msu.ru/literature/kurs/2011_01_simonova.pdf

... WRF (Weather Research and Forecasting Model) [9]. ... NOAH LSM (National Centers for Environmental Prediction, Oregon State University, Air Force, Hydrology Lab-NWS Land Surface Model) [3]. ... WRF ­ (Urban Canopy Model, UCM) [6] (Building Environment Parameterization, BEP) [8]. ... C ­ ( HA = r · HR + rw·Ha ). , r ­ ( UCM NOAH LSM « » , , , (, .) H = A H ­ , LSM +A HA , (, H ­ ; A , , ); A ­ , (, , ); HLSM ­ , NOAH LSM; HA ­ , UCM. ... 48 1 29 2007 00 . ... WRF) : - NOAH; UCM - ; BEP - . ...

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• http://atm563.phys.msu.ru/rus/gidromet_public_html/trudy/thmc3440111.pdf