... SDPfox - the software package for the prediction of functional specificity groups and amino acid residues that determine the specificity using MPA. ... Amino acid residues that determine differences in protein functional specificity and account for correct recognition of interaction partners, are usually thought to correspond to those positions of a protein multiple alignment, where the distribution of amino acids is closely associated with grouping of proteins by specificity. ...

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• SDPsite - Algorithm Format requirements
• User's guide
• SDPpred

... Геология >> Геотектоника | ... Добавить новое сообщение . ... Учебное пособие "Введение в тектонофизику". Гончаров М. А., Талицкий В. Г., Фролова Н. С. Ответ. ... Тезисы научной конференции ЛОМОНОСОВСКИЕ ЧТЕНИЯ, ноябрь 2011 года СЕКЦИЯ ГЕОЛОГИЯ: . ...

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... Kingdon, Penning and Paul ion traps invented correspondingly in 1923, 1936 and 1956 have played essential role in 20th century physics- test of the validity of quantum electrodynamics, tests of symmetry properties of fundamental laws-particle-antiparticle (electron-positron), the electric dipole moment of the neutron, ion spectroscopy, hyromagnetic ratio, comparison of masses m(p+/m(e-) m(CO+)/m(N2+) frequency and time standards, dusty plasma and so on. ... 2007 Biophysics dep., ...

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... RUBRRRIKA RUBRIKA Evolution of the Quantitative Measures of Quantum Information: on the Path to a Unified Theory of Quantum Information B. A. Grishanin and V. N. Zadkov Physics Faculty and International Laser Center, Moscow State University, Moscow, 119992 Russia e-mail: grishan@comsim1.phys.msu.su Received July 11, 2002 Abstract--The most general approaches to determining the quantitative measure of quantum information are analyzed based on physical content. ... with an arbitrary state | ...

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• http://qilab.phys.msu.ru/papers/VMU-No.%205,%20pp.%20315-320%20(2008)-EN.pdf
• http://qilab.phys.msu.ru/papers/LasPhys-2000-10(6)-en.pdf
• http://qilab.phys.msu.ru/papers/JETP-1999-89(4)-en.pdf

... PhDi . ... SOFTWARE PACKAGE FOR CALCULATIONS OF PHASE DIAGRAMS . elaborated and developed by laboratory scientists) . The software package contains a database of thermodynamic properties for about 200 systems and a software based on a so called convex hulls approach. ... binary systems in coordinates Temperature - Composition at fixed pressure and Pressure ? ... Colloquium on 24.12.12 20 Dec 2012 . ... Colloquium on 23.11.12 22 Nov 2012 . ... Laboratory of Chemical Thermodynamics . ...

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... The nonlinearity has the form of a sigmoid function of two parameters a and b. The zoning of the plane (b; a) with respect to the number and type of stationary states (critical points) for the model under consideration is performed. ... The function g(u) (called a shot function) is expressed by g(u; a; b) = 1 1 + a exp(\Gammabu) (2) where the parameters a and b are positive. ... Analysis of critical points. ... The center­type stable critical points correspond to a minimum of the function U (u) [3]....

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SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins . ... Amino acid residues that determine differences in protein functional specificity and account for correct recognition of interaction partners, are usually thought to correspond to those positions of a protein multiple alignment, where the distribution of amino acids is closely associated with grouping of proteins by specificity. ... As colored columns of the alignment. ...

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• HTH3_numeration_assumed
• ETS_all_contacts alignment
• ETS numeration assumed

NAME apxs - APache eXtenSion tool SYNOPSIS apxs - g [ - S variable = value ] - n name apxs - q [ - S variable = value ] query ... apxs - c [ - S variable = value ] [ - o dsofile ] [ - I incdir ] [ - D variable [= value ] ] [ - L libdir ] [ - l libname ] [ - Wc, compiler - flags ] [ - Wl, linker - flags ] files ... apxs - i [ - S variable = value ] [ - n name ] [ - a ] [ - A ] dso- file ... apxs - e [ - S variable = value ] [ - n name ] [ - a ] [ - A ] dso- file .. ...

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• An In-Depth Discussion of Virtual Host Matching

... And we get the formal equality of the functional integrals 11 2 exp - ((t)) dt d = 2 0 t=1 11 4 11 2 2 (t)dt - (t)d d . ... 3 0 Note that functions (t) and (t) belong to different functional spaces. ... The classical action and the classical limit of the corresponding quantum theory turn out to be different. ... 6 Now the substitution (t) = (t)+ t (11) d a -T 2( ) - 2 results in the equality of the functional integrals F () exp{-A+()}d = X+ (12) C [-T ,+T ] 1 F (()) exp - 2 +T -T ((t))2dt d . ...

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• http://nuclphys.sinp.msu.ru/conf/lpp14/220809/Konstantinova.pdf
• http://nuclphys.sinp.msu.ru/conf/epp10/Galtsov.pdf
• http://nuclphys.sinp.msu.ru/conf/XFEL/XFEL-TDR_Chapter09_Project%20Management.pdf

Another mechanical model of parametrically excited pendulum and stabilization of its inverted equilibrium position Anton O. Belyakov 1 Lomonosov Moscow State University 2 Vienna University of Technology 8th European Nonlinear Dynamics Conference (ENOC 2014) Vienna, July 7, 2014 Scheme of a parametric pendulum y O l (t ) - g m 2 r1 + m 2 Equations of motion mr 2 1 d d2 + c1 + m g l (t ) sin () = 0 dt 2 dt (1) Dimensionless equation Three dimensionless parameters and ...

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• http://belyakov.imec.msu.ru/papers/ENOC2014.pdf

GSK-3 Inhibitors: The Dataset . ... We suppose that it will be useful for the other researchers in the field of chemoinformatics; the main peculiarity of this Dataset is wide activity range of compounds and significant diversity of the actives (true inhibitors). ... IC50 is given in nM (sic!) according to the data reported in the article. It's a text field (as well as the other raw activity data fields) and values like '>10000' are given for inactive compounds. ...

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... QUANTUM INFORMATION AND COMPUTATION Absolute Robustness of the First Principal Fourier State Component and Noise Suppression in Hilbert Space Yu. ... 2, Moscow, 119992 Russia e-mail: skulik@qopt.phys.msu.su Received March 28, 2006 Abstract--The effect of the absolute robustness of the first principal Fourier-state component is developed upon rounding off the density matrix elements. ... This is interpreted as the absolute robustness of the first principal component of the Fourier state density...

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• http://qi.phys.msu.ru/papers/2011-pra-83-060302(R).pdf
• http://qi.phys.msu.ru/kulik/Papers/pR4645_1.pdf
• http://qi.phys.msu.ru/papers/2010-prl-105-010404.pdf

... Tue, 30 Nov 2010 17:10:25 +0300 . ... allpy/alignment.py allpy/monomer.py allpy/sequence.py . ... allpy/alignment.py . ... 1.1 --- a/ allpy / alignment .py Sun Nov 28 17:40:11 2010 + 0300 1.2 +++ b/ allpy / alignment .py Tue Nov 30 17:10:25 2010 + 0300 1.3 @@ -15,17 +15,13 @@ 1.4 import block 1.5 from fasta import save_fasta 1.6 1.7 - class Alignment (object): 1.8 + class Alignment (dict): 1.9 Alignment 1.10 1.11 - Mandatory data: 1.12 - * body -- dict 1.13 { Sequence object :[...

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• allpy: lib/graph.py diff
• PAL2NAL output
• allpy: 2c3bd08e1f1d allpy/graph.py