Protein 3D architectures and structural motifs: automated annotation E.A. Aksianov1, A.V. Alexeevski 1 2 1,2 Belozersky Institute, Lomonosov Moscow State University, Leninskie Gori 1, Moscow, Russia Scientific Research Institute for System Studies (NIISI RAN), Moscow, Russia evaksianov@gmail.com, aba@belozersky.msu.ru Description of a protein 3D structure in terms of structural domains, architecture, topology and structural motifs is a hard problem. ... The core is extended by small -sheet (unit_3). ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/31.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/9.pdf

Symbolic circuit-matrix processor and evaluator . ... This software is reliable over the range of benchmark circuit complexity (both *.CIR and *.MAT file). ... SYMBOL is a symbolic-algebra package which in contrast to REDUCE, MACSYMA, MAPLE, MATHEMATICA, MathLAB, MathCAD and other known multi-purpose systems is especially intended for analysis of any lumped, linear, time-invariant circuit. ... pure ASCII text . ... CIRSYM - SYMbolic CIRcuit processor used to format ASCII text file *.out for CALCSYM. ...

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• Symbolic circuit processor

In our model for RNA secondary structure formation we assume that each of the candidate helices (see definition in the main text) may exist in two states. A helix can be completely zipped, or it can be completely decayed. ... The following schema is used to estimate the effective transition constants between zipped and decayed states: . ... To determine the kinetic constants, we use the transition state theory, which is often used in chemical kinetics (Figure 2). ... Transition . ...

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... 2 · ­ , , · ­ · ­ , 03.12.2015 . ... 14 03.12.2015 · · · 03.12.2015 . ... Verifier Uni ve rsi ty of Te x as 2013 Anteater Uni ve rsi ty of Il l i noi s 2011 FlowChecker Uni ve rsi ty of North Carol i na 2010 VERMONT Network disjoint Port #02 Port #03 h2 h3 s1 Port #01 h1 Port #04 h4 main: disjoint() := Forall[x, out_x, y, out_y: !R(x, out_x) or !R(y, out_y) or x[p] == out_y[p] and out_x[p] == y[p] or x VERMONT proxy CLI Packets are delivered through the control plane We can block them! ...

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... IPI program works with group of sounding curves (from 1 to 100) in one data file. ... If Type of Array is =+3 or +4, then: 7 line : Name of VES (from 1 to 8 symbols) 8 line : number of distances for this VES . 9 line : dV values (in mV or V) 10 line : I values (in mA or A) Examples of *.dtg file : Example 1 for stabilized current AMN array Bilibino-90, VES from 24.5 to 43.0. 1 2 lines - description of data profile 4 1 0 17 1 -3 S { VES number , KeyIP, ?ax.nAB, ...

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• TES. Modeling example.

... COMPUTATIONAL . ... Scientific description and computerization of archives . Researchers of the Rare Books and Manuscripts Department of the Scientific Library of Moscow State University, the Orthodox Svyato - Tikhonovsky University and the Laboratory for Computational Lexicography are working on the scientific description of I. A. Ilyin’s personal archives. ... The conception of scientific description and computerization of archives was developed within the framework of this project. ...

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... Abstract Concepts and the basic models of a current structured disperse systems, namely, suspensions and solutions of polymers in newtonian to the dispersive environment are considered. ... Moscow University Chemistry Bulletin . 2011, Vol. ... 4, P. 243 . Copyright (C) Chemistry Dept., Moscow State University, 2002 . ... The site is supported by Russian Foundation for Basic Research . ... Copyright (C) Chemisty Department of Moscow State University . ...

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Dmitri Lukjanchikov - MSU78 slugger, who also takes a job of our coach. Usually he is a stretching and power lifting coach in the winter, but he coaches also in spring-summer-autumn. He makes on us a lot of running, stretching and throwing drills. About his playing career: He played for SKA MVS in 1997 and returned to the MSU78 in 1998. He is the best power hitter in MSU78 lineup, but he bats fifth. ... Here is Dmitri' 1997 and 1998 statistics . ... 1997 . SKA MVS .314 . ... 1998 . ...

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... 2015 . ... Submit your article . ... In this article, the author returns to the events that occurred after the 9/11 and on concrete examples reveals features of the concept of American exceptionalism through the prism of the war against global terrorism. ... The article also examines the use of particular methodological apparatus of pragmatism and realism in foreign policy decisions making of Administrations George Walker Bush and Barack Hussein Obama. ... Public Administrarion". ...

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... WN_LIST=/ opt / glite / yaim /etc/wn-list.conf USERS_CONF=/ opt / glite / yaim /etc/users.conf GROUPS_CONF=/ opt / glite / yaim /etc/groups.conf FUNCTIONS_DIR=/ opt / glite / yaim /functions OUTPUT_STORAGE=/tmp/jobOutput # Set this to your prefered and firewall allowed port range GLOBUS_TCP_PORT_RANGE= 20000,25000 PX_HOST=lcg14.sinp.msu.ru BDII_HOST=lcg-bdii. cern .ch MON_HOST=my-mon. cern .ch REG_HOST=my-reg ...

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• Atlas

extra:main ]] . CompHEP . ... Script for including cuts, kinematics, or regularizations into batch.dat file . Script for CompHep cross-sections energy dependence calculation . ... When you done CompHep calculations for the process under study at one energy, you may easely get cross-sections energy dependence running script cs_energy_dep.pl . ... For every energy point the script modifies results/batch.dat file and runs CompHep script num_batch.pl to calculate given process cross-sections. ...

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• download:cinterfaces101 [CompHEP]
• download:cinterfaces301 [CompHEP]
• download:cinterfaces302 [CompHEP]