... We applied this approach to investigate mRNA secondary structures of the influenza virus. In a recent study, we investigated if mRNA structures can be associated with the coldadapted, temperature-sensitive (ca/ts) phenotype of the influenza A virus which has been used as live attenuated vaccines for decades (2). ... We identified those areas within an RNA chain where dissimilarities of RNA secondary structures at two different temperatures are particularly pronounced. ... RNA biology, 9:1266­1274. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/91.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/41.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/4.pdf

... base.Sequence major cleanup * moved base.Sequence.secstr_has to pdb (it appears that secondary structure it uses is from PDB, which is not a nice thing to do; secondary structure is an entity in itself and must have same names across different sources) * removed stupid base.Sequence.monomers, since base.Sequence is subclass of list * removed all methods that reimplement list behaviour * fixed headers of base.Sequence.from_slice . ... 21 def std_id ( pdb_id , pdb_chain , pdb_model = None ): . ...

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• allpy: 4a2341bc90b1
• allpy: 4a2341bc90b1 .hgignore
• allpy: 4a2341bc90b1 debian/rules

... The Lambda C1 repressor consists of two domains connected by a linker: an N-terminal DNA-binding domain that also mediates interactions with RNA polymerase, and a C-terminal dimerisation domain [1]. ... Several different phage repressors from different helix-turn-helix families contain DNA-binding domains that adopt a similar topology. ... Bell C.E. , Frescura P. , Hochschild A. , Lewis M. Crystal structure of the lambda repressor C-terminal domain provides a model for cooperative operator binding. ...

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• ETS_all_contacts alignment
• Hydrophobic clusters
• Homeodomain numeration assumed

Proof of the Glacier Origin of Tabular Massive Ice V.I. Solomatin, N.G. Belova Lomonosov Moscow State University, Department of Geography, Moscow, Russia Abstract This paper examines the problem of the genesis of tabular massive ice and suggests a new definition of tabular massive ice. ... The discordant upper contact with overlying sediments is irrefutable proof of the buried genesis of massive ice. ... Keywords: buried glacial ice; discordant contact; glacial deformations; tabular massive ice. ...

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• http://www.geogr.msu.ru/cafedra/segzs/nauchd/reports/Ivanova%20TEXT.pdf
• journal 'GEOGRAPHY, ENVIRONMENT, SUSTAINABILITY'
• Сергей Сергеевич Зилитинкевич

Lomonosov Moscow State University was established in 1755 . ... Lomonosov Moscow State University Diary . ... MSU Web Sites . ... Faculties . ... Study and Research . ... MSU Online . ... Faculty of Physics . Faculty of Chemistry . ... Faculty of Soil Science . ... Faculty of Materials Science . ... MSU-RAS Research Institute of Soil Science . ... Research Priorities in Sciences at MSU: . ... Lomonosov Moscow State University . ... Copyright 1997?2016 Lomonosov Moscow State University . ...

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• University Structure

... Kingdon, Penning and Paul ion traps invented correspondingly in 1923, 1936 and 1956 have played essential role in 20th century physics- test of the validity of quantum electrodynamics, tests of symmetry properties of fundamental laws-particle-antiparticle (electron-positron), the electric dipole moment of the neutron, ion spectroscopy, hyromagnetic ratio, comparison of masses m(p+/m(e-) m(CO+)/m(N2+) frequency and time standards, dusty plasma and so on. ... 2007 Biophysics dep., ...

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DVM-system of parallel program development . Goals and structure . ... 2.1 C-DVM and Fortran DVM parallel program development . ... Using C-DVM and Fortran-DVM languages a programmer deals with the only version of the program both for sequential and parallel execution. ... These rules are syntactically organized in such a manner that they are "transparent" for standard C and Fortran compilers and doesn't prevent DVM-program execution and debugging on workstations as usual sequential program. ...

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• DVM debugger. Detailed design. Part 4

Research topics . ... This group is formed to study the reactions at semiconductor surfaces. ... Group members: . ... M.V. Lomonosov Moscow State University: . ... Dr. Tatiana S. Zyubina, senior scientific researcher (quantum chemical modeling) . ... Joint Semiconductors Surface Study group: research sketches . The Joint Semiconductors Surface Study (JSSS) group was developed on the base of Inorganic Chemistry division, Chemistry dept. of M.V. Lomonosov Moscow State University. ...

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• PhDs (since 1995):
• Synthesis, Crystal and Electronic Structure of Subvalent Metal Compounds
• I n o r g a n i c C h e m i s

... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Notes on searching by similarity
• IGLA-3D User Guide
• GEA :: Gene Expression Analysis

... История кафедры . ... младших курсов . ... Уважаемые студенты 1-го, 2-го и 3-го курсов! ... Семинар кафедры проходит по пятницам в 15.20 в комн. ... а также на стендах кафедры на 2-м и 4-м этажах. Информацию о более ранних событиях см. в разделе "Жизнь кафедры" . ... 119991, Москва, Ленинские горы, д.1, стр.2, МГУ имени М.В.Ломоносова, физический факультет, кафедра фотоники и физики микроволн . ...

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... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• RNA Kinetics: Theory

... Class . ... Provides an abstraction for multidimensional array access, some concrete implementations, and ways to view a MultiArray as if it had a different structure. ... This interface defines the services required by MultiArrayProxy to manipulate indexes and the dimensions of a MultiArray. ... In the following, we use the unadorned term "array" to mean the Java language construct, and the term "multidimensional array" for the mathematical abstraction modeled by the MultiArray class in this...

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• : Overview

Global modeling of the magnetosphere in terms of paraboloid model of magnetospheric magnetic field I. Alexeev, V. Kalegaev The solar wind influence on the magnetospheric state is sufficiently nonlinear especially during strong disturbances. ... Model parameters are calculated through the empirical data. ... The solar wind driving of the magnetospheric magnetic field is realized through the dependence of the model parameters on empirical data (solar wind plasma parameters, IMF, AL and Dst). ...

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Paleosoils: Indicators of Environmental Changes in the Holocene . ... According to Dokuchaev V.V. "the soil is the mirror of landscape". The dependence between soil formation processes and climatic changes (thermal conditions, humidity) has been established. ... The experience gained on studying buried soils of Russia and the CIS countries in the Holocene shows that paleoclimatic conditions can be reconstructed by buried soils for various the Holocene chronocuts rather accurately. ...

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• NAP - subject matter topics
• Short Papers of Commission members
• the paleopedology working group had a conference last year in Mexico on "Global

Maximum RPM: Taking the Red Hat Package Manager to the Limit . ... Creating Subpackages . ... If all the software in the world followed the usual "one source, one binary" structure, there would be no need for subpackages. After all, RPM handles the building and packaging of a program into a single package file just fine. ... By using subpackages, there's no need to maintain separate spec files and endure the resulting headaches when new versions of the software become available. ...

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• Apache mod_rewrite Technical Details - Apache HTTP Server
• Platform-Dependent Conditionals
• WikiCourse/52 Structure in the wiki - UNИX

Hybrid States of Surface and Tamm Plasmon-Polaritons in Photonic Crystals B.I. Afinogenov, V.O. Bessonov, I.V. Soboleva, and A.A. Fedyanin Lomonosov Moscow State University, 1 Leninskie gory, 119991 Moscow, Russia afinogenov@nanolab.phys.msu.ru Abstract: Experimental observation of Tamm plasmon-polariton (TPP) and surface plasmonpolariton (SPP) hybrid mode in metal/photonic crystal system is reported. Interaction bet ween TPP and SPP leads to repulsion of their dispersion curves. ...

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• Nanophotonics of surface states in photonic crystals | Laboratory of

... The factors that play the key role in complex formation are as follows: the rate of protein diffusion to the docking site; long-range electrostatic interactions between protein surfaces, geometric and chemical complementarity of binding areas; molecular mobility at the protein­protein interphase, hydrogen bonds, Van der Waals interactions, hydrophobic interactions, and salt bridges. ... Three-dimensional protein molecules are constructed on the basis of data extracted from the Protein Data Bank. ...

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• Fluorescence induction curves registered from individual microalgae cenobiums

Next: SYSTEM CALL: msgget() Up: Internal and User Data Previous: Kernel msqid_ds structure . The kernel stores permission information for IPC objects in a structure of type ipc_perm . ... struct ipc_perm { key_t key; ushort uid; /* owner euid and egid */ ushort gid; ushort cuid; /* creator euid and egid */ ushort cgid; ushort mode; /* access modes see mode flags below */ ushort seq; /* slot usage sequence number */ }; . ... Finally, the slot usage sequence number is stored at the end. ...

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• NIS versus NIS+
• Kernel semid_ds structure
• Internal and User Data Structures

Next: State of development Up: Guided tour through MICO Previous: Guided tour through MICO . Modern programming languages employ the object paradigm to structure computation within a single operating system process. The next logical step is to distribute a computation over multiple processes on one single or even on different machines. ... The Common Object Request Broker Architecture (CORBA) is a specification of such a middleware platform by the Object Management Group (OMG) (see [ 5 ]). ...

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• Qt Collection Classes
• Linux Threads Home Page: How is threading different from tasks using shared
• Qt API Structure Overview

... Faculty of Physics . ... 7 (495) 939-16-82 info@physics.msu.ru . ... Structure . ... Search Faculties Staff . ... Second harmonic generation in metamaterials with magnetodipole resonance . ... Scientists from the Faculty of Physics in collaboration with their colleagues from the Institute of Physics of Microstructures of the Russian Academy of Sciences (Nizhny Novgorod) studied linear and nonlinear magneto-optical properties of multilayered magnetic structures. ... Faculty of Physics, 2016 . ...

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• Обеспечение учебного и научного процессов на факультете лицензионным
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• Администрация