... Instructions are in README.TXT file inside the tarball. ... tar -xvf nhunt_x86.tar Query and database files should contain sequences in FASTA format ( wikipedia description ). ... Default name of the output file is 'nhunt.out'. ... Any parameter consists of key and value and is called as '-key value', where 'key' is one character and 'value' is any number of characters. -i Query file . ... No default value. -d Database file . ... No default value. -o Output file . ... Default value: 'nhunt.out' . ...

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System parameters on Digital UNIX . ... Digital and Cray use the number of bytes as the KIND -parameter. ... LOGICAL Default byte word KIND number = 4 1 4 LOGICAL Default double quad KIND number = 4 8 16 INTEGER int15 int31 int63 KIND number = 2 4 8 digits = 15 31 63 radix = 2 2 2 range = 4 9 18 huge = 32767 2147483647 9223372036854775807 bit_size = 16 32 64 REAL single double quad KIND number = 4 8 16 digits = 24 53 113 maxexponent = 128 1024 16384 minexponent = -125 -1021 -16381 ...

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• Long description for example showing how structurally overlapping cells are
• Long description for the second Bach/XML formatting example
• Long description of example illustrating precedence in the collapsing borders

... file . ... file log . ... allpy.base: added parameter use_existing to *.add_markup() to allow same markup to be added multiple times explicitly [see #95] . ... 1 Using library in-place . ... 18 NEWS file . ... 21 NEWS file contains news that are important to the library users, not to the . ... It must contain a word abot every change in any interfaces. ... 23 contain a word about bugfix, if that bugfix was important and could cause users . ... 38 * change(!): critical library interface change . ...

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• allpy: 0192c5c09ce8 allpy/fileio.py
• allpy: README.devel annotate
• allpy: 1785e40b2a2d allpy/fileio.py

... Source File: mod_negotiation.c . Module Identifier: negotiation_module Content negotiation, or more accurately content selection, is the selection of the document that best matches the clients capabilities, from one of several available documents. ... A type map (a file with the handler type-map ) which explicitly lists the files containing the variants. ... Apache only recognizes encodings that are defined by an AddEncoding directive. ... Content-Language: . ... Module: mod_negotiation . ...

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• Manual Page: httpd - Apache HTTP Server
• Apache Multiple Log Files
• Manual Page: htpasswd - Apache HTTP Server

... Class . ... public class NetcdfFile . ... A concrete implementation of the Netcdf interface, this class provides connection to NetCDF version 1 files. ... NetcdfFile (java.io.File file, boolean clobber, boolean fill, Schema template) . ... Constructor Detail public NetcdfFile (java.io.File file, boolean clobber, boolean fill, Schema template) throws java.io.IOException . ... public NetcdfFile (java.lang.String path, boolean clobber, boolean fill, Schema template) throws java.io.IOException . ...

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• : Class Schema
• : Class ConcreteIndexMap
• ExtensionFileFilter

... Recommended values . Start word length . Start length of motiff for Multiple sequence alignment. ... Max N Mismatches . ... Min score . ... Gap parameter . This parameter defines gap scoring. the grater this value is the stronger gap will be panalysed . ... If inforation content of a column is less than given value the column should be not included into alignment. the grater this value is the stronger gap will be panalysed . ... Max loop . Max energy of a helix . ... cgcatagctc cacca . ...

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. To open an existing file for editing: vi intro . This opens the file intro for editing. This file already exists in the current directory. To create a file to edit: vi part2 . This command starts vi with a new file named part2 . This file does not exist in the current directory until it is written to using the write command. To simply start vi : vi . This command places you in vi . You can then enter and edit text and write it to a file.

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• Examples of passing arguments to the shell
• Examples of saving mail to folders
• Examples of Bourne shell scripts

... Research programm of the laboratory-chair< . ... Laboratory-chair of Discrete mechanics on a microscopic scale . ... Thus the structures of the physical world are not physical objects but physical processes. ... The primitive entity is called a material point. ... The value of the property “existence” of the material point varies from “the material point does not exist” to “the material point exists” by this process. ... Let call this structure a dynamical graph or a d-graph. ...

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• O.S.Razumovsky. Models of Time in Physics and Cosmology
• M.Shulman

... Given package is a set of special commands and their handler - JOB program. The command aimed for description of often performed operations with files of PC-GAMESS program (dat, out, pun). ... Commands allow running calculation, performing other programs, data change between files and modification of files. ... Command inserts specified group in file.inp. ... del_g h2o.dat |Command deletes all repetition of| |$basis |specified group in file.inp. ... Command changes contents of group on specified | ...

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• PC GAMESS/Firefly DOCUMENTATION - running in parallel under Windows using

... x264 is an open source codec of standard MPEG4 AVC/H.264, developed by programmers from all over the world. ... Accumulated during previous frames' compressions statistic is actively used by codec to improve effectiveness of adaptive models. ... These parameters are used only before encoding start, so, our improvements are more significant for short sequences. ... 3 Results of codec x264 modification on "flower" sequence . ... 5 Results of codec x264 modification on "flower" sequence, low bitrates ....

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• x264 codec improvement | Лаборатория компьютерной графики и мультимедиа
• Old cinema effect for video | Graphics and Media Lab
• Old cinema effect for video | Лаборатория компьютерной графики и мультимедиа

Soliton-antisoliton production in par ticle collisions Sergei Demidov, Dmitry Levkov Institute for Nuclear Research RAS levkov@ms2.inr.ac.ru September 10, 2010 S. Demidov, D. Levkov (INR RAS) Soliton-antisoliton production September 10, 2010 1 / 15 Introduction Topological solitons (1 + 1) V() 1 S= 2 g dxdt (µ )2 /2 - V () =c=1 g -- semiclassical parameter and coupling constant ( = g ) v0 v+ S v+ 0 A x vS. ... S. Demidov, D. Levkov (INR RAS) Soliton-antisoliton production September 10, 2010 15 / 15 ...

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• http://qfthep.sinp.msu.ru/talks2013/QFTP-2013_Bodnya__Derkach__Kovalenko__Puchkov__Feofilov1.pdf
• http://qfthep.sinp.msu.ru/talks/kinks.pdf
• http://qfthep.sinp.msu.ru/talks2011/nekrasov.pdf

Fortran-DVM . ... Language description . ... 2.2 Syntax of FDVM directives . ... 4.2 Distribution of dynamic arrays . ... 6 Remote data specification . ... 6.2 SHADOW type references . ... 6.2.2 Synchronous specification of independent references of SHADOW type for single loop . ... 6.2.5 Asynchronous specification of independent references of SHADOW type . ... 6.3.3 Asynchronous specification of REMOTE type references . ... 6.4.2 Asynchronous specification of REDUCTION type references . ...

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• C-DVM language description
• Библиотека Lib-DVM. Детальный дизайн. Часть 3 (12.16 - 12.18)
• Debugging DVM-program. User's guide. Part 1

... An equation is derived for the interrelationship between the thermal-lens signal and geometry parameters of the optical system of the dual-beam spectrometer (distances between beam waists, sample cell, and the detector). The optimisation of the optical system allowed the limits of detection and determination of Methyl Orange as an example model system to be lowered by an order of magnitude and the linear calibration range to be widened by more than one order of magnitude. ...

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• Moscow University Chemistry Bulletin Vol. 49, No. 4, P. 226 (2008)
• Moscow University Chemistry Bulletin Vol. 49, No. 4 (2008)
• On The Force Field Parameters For Metal Ion Coordination Sphere in Molecular

... Vestnik Moskovskogo Universiteta. Seriya 1. Matematika. Mekhanika. ...

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THE PARAMETERS INVOLVED IN HAPKE'S MODEL FOR ESTIMATION OF THE COMPOSITION OF THE EJECTA LUNAR TERRAINS. ... In the previous papers we were estimated the surface roughness of the ejecta lunar terrains by means comparison of the local phase function and the average integrated lunar indicatrix. ... The Hapke's theoretical model of the lunar surface reflection. ... For THE PARAMETERS INVOLVED IN HAPKE'S MODEL: S.G. Pugacheva, V.V. Shevchenko a low-albedo lunar surface parameter Bo = 1. ...

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• http://selena.sai.msu.ru/Greg/Publications/ms38/ms090.pdf
• http://selena.sai.msu.ru/Pug/Publications/m44_70_pugacheva.pdf
• http://selena.sai.msu.ru/Shev/Publications/ms38/ms085.pdf

Development of new approaches to the analysis of ring shapes in organic molecules and the description of electronic distribution (atomic charges) and halogen bonding in the framework of forcefield model for rapid estimation of intra- and intermolecular interaction energies in molecular mechanics, molecular dynamics and docking methods . Forcefield is a model and a set of parameters for theoretical description of intra- and intermolecular interactions. ... 2016 Laboratory of Medicinal Chemistry ...

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Production of kink ­ antikink pair in collisions of high­energy par ticles Dmitry Levkov , Sergei Demidov Institute for Nuclear Research RAS demidov @ms2.inr.ac.ru August 22, 2009 D. Levkov , S. Demidov (INR RAS ) Production of kink ­ antikink pair August 22, 2009 1 / 12 Introduction Topological solitons in weakly coupled theories (1 + 1) V() 1 S= 2 g dxdt (µ )2 /2 - V () =c=1 ...

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• The European X- Ray Free-Electron Laser

... Measurement of the MASS detectors parameters with mass program January 24, 2015 [112707] . MASS/DIMM electronics. ... Turbina-core(D): Dimm User Guide. ... N.Shatsky, V.Kornilov, The revision of the MASS/DIMM star catalogue. ... О.Возякова, В.Корнилов, Н.Шатский, Новое программное обеспечение прибора MASS/DIMM. ... V.Kornilov, N.Shatsky, S.Potanin, O.Voziakova, B.Safonov Preliminary results of astroclimate parameters measurements at the Sternberg 2.5m telescope installation site. ...

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... This file is written in text format and consists from several sections. The order of this sections doesn't important. ... These sections should be described in the file: init , sample , var , var.scale (not nessesarly) , var.display (not nessesarly). ... init_read - Number of bytes needed to be read after string init have been sent. ... If additional data channel is enabled ( 2.1.2 ) during DSP board initialization it sends strings [init]init to chosen COM-port and reads [init]init_read bytes. ...

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• Scan parameters
• Parameters of 3D Images
• Scanning Probe Microscopy Image Processing Software User's Manual FemtoScan

Identifiability analysis and predictive power of the gene circuit model Ekaterina Myasnikova St.Petersburg State Polytechnical University, 29 Politekhnicheskaya, 195251, St.Petersburg, Russia, e-mail: myasnikova@spbcas.ru The correct prediction of system behavior is a necessary property of a mathematical model that is largely determined by the identifiability of model parameters. The number of parameters that are estimated by fitting to experimental data is typically large. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/23.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/16.pdf