MetaFast : fast reference-free graph-based comparison of shotgun metagenomic data Sergey V. Kazakov1, Vladimir I. Ulyantsev1, Veronika B. Dubinkina2,3, Alexander V. Tyakht2, Dmitry G. Alexeev 1 2 3 2 ,3 ITMO University ... (State Un iversity), Dolgoprudny, Russia Since the emergence of high-throughput genomic sequencing technologies, a huge volume of data has been accumulated describing complex microbial communities ( microbiota ) ... Example of MetaFast output on a set of real data. ...

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((tr|Q9HWZ3:27.13469,(((((tr|Q97JG6:73.32871,sp|P52281:58.21097):22.08826, . (tr|Q8Y6Z1:50.97049,(tr|Q9KDW9:31.89890,(tr|Q99UH4:56.31642, . sp|P18156:43.43318):19.58605):11.29379):3.59077):71.07033, . (sp|Q51389:17.43830,((tr|Q8ZJK5:16.37272,sp|P11244:16.30590):17.93318, . sp|P44826:37.32225):18.11240):90.64721):85.73800, . tr|Q97P66:72.12900):67.97217,tr|P73809:39.02698):25.46760):7.46192, . ((tr|Q92ZW9:33.27410,tr|Q8UJW4:14.11857):8.47005, . sp|Q9L772:29.68911):15.56444,sp|P48838:30.29193); .

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