... See #95 1) Sequences, Alignment and Blocks now have two new methods: - add_markup(name, markup_class=optional, **kwargs=optional) - remove_markup(name) name refers to the same name as in aln.markups[name] or sequence[i].name It is now explicitly denied to create markups any other way. ... For sequences markups it removes markup attribute from each monomer. ... 33 def _subclass ( cls , name = '' , code1 = '' , code3 = '' , is_modified = False ): . ... 75 return monomer . ... 87 def __repr__ ( self ):...