Screening pattern or alignmemt against PROTEIN databank

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Дата изменения: Wed May 23 22:40:04 2001
Дата индексирования: Tue Oct 2 01:26:15 2012
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Belozersky Institute

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Russian EMBnet Node

Screening pattern or alignment against protein databank

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References

Sophisticated Version

Protein databanks

Input Type
Pattern Alignment

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Pattern (or alignment)

Pattern example 1:	Pattern example 2:
`G-P-H-V-T`	`[RK]-x-A-x(3,5)-{YWL}-x(2)-W`
Alignment example:
FA9_CAVPO GPHVTEVEGTNFLTGIISWGEE-CAMKGKYGIYTKVSRYVNW- FA9_PIG GPHVTEVEGTSFLTGIISWGEE-CAVKGKYGIYTKVSRYVNW- KAG_PIG GPLICNGM----WQGITSWGhtpCGSANKPSIYTKLIFYLDWI FA9_CAVPO FCAGFHEGGRDSCQGDSG FA9_PIG FCAGFHEGGKDSCLGDSG KAG_PIG LCAGYLPGGKDTCMGDSG

Last updated - August 14, 2000.
Any comments or suggestions are welcomed at: nik@genebee.msu.su