| age |
author |
description |
| Wed, 15 Dec 2010 01:51:52 +0300 |
Daniil Alexeyevsky |
Automated merge with ssh://kodomo/allpy |
| Wed, 15 Dec 2010 01:51:50 +0300 |
Daniil Alexeyevsky |
Trivial fixes to ReST in docstring markup |
| Wed, 15 Dec 2010 00:46:13 +0300 |
boris |
repeats: mistake in intersection determination fixed |
| Tue, 14 Dec 2010 21:25:22 +0300 |
Daniil Alexeyevsky |
Added protein.Monomer and protein.MonomerType as example of Monomer* subclassing |
| Tue, 14 Dec 2010 21:14:52 +0300 |
Daniil Alexeyevsky |
Removed obsolete modules |
| Tue, 14 Dec 2010 21:06:42 +0300 |
Daniil Alexeyevsky |
Moved contents of allpy.sequence into allpy.base |
| Tue, 14 Dec 2010 21:02:49 +0300 |
Daniil Alexeyevsky |
Moved contents of block.py to base.py without any changes. |
| Tue, 14 Dec 2010 20:51:53 +0300 |
Daniil Alexeyevsky |
Moved contents of allpy._monomer to allpy.base |
| Tue, 14 Dec 2010 20:05:13 +0300 |
Daniil Alexeyevsky |
Merge |
| Tue, 14 Dec 2010 20:00:58 +0300 |
Daniil Alexeyevsky |
Version with working sec_str |
| Tue, 14 Dec 2010 17:06:33 +0300 |
Daniil Alexeyevsky |
Minor fixes to ReST markup in allpy._monomernew-monomer |
| Tue, 14 Dec 2010 15:29:49 +0300 |
Daniil Alexeyevsky |
docs: added link to module indext (generated by sphinx-autopackage-script)new-monomer |
| Tue, 14 Dec 2010 15:29:19 +0300 |
Daniil Alexeyevsky |
Fixed ReST markup in allpy._monomer.Monomer docstring.new-monomer |
| Mon, 13 Dec 2010 22:16:37 +0300 |
Daniil Alexeyevsky |
Added autogenerated sphinx docsnew-monomer |
| Mon, 13 Dec 2010 22:16:04 +0300 |
Daniil Alexeyevsky |
Fixed ReST markup in allpy.data.codesnew-monomer |
| Mon, 13 Dec 2010 21:27:48 +0300 |
Daniil Alexeyevsky |
Syntax error in allpy._monomernew-monomer |
| Mon, 13 Dec 2010 20:12:11 +0300 |
Daniil Alexeyevsky |
Incompatible changes to Monomer interfaces.new-monomer |
| Tue, 07 Dec 2010 20:22:19 +0300 |
boris (kodomo) |
allpy: collective improvement session |
| Sat, 04 Dec 2010 00:19:17 +0300 |
boris |
allpy.base: add alignment (old version) |
| Sat, 04 Dec 2010 00:18:50 +0300 |
boris |
allpy.pdb: move documentation to begin of file |
| Sat, 04 Dec 2010 00:08:12 +0300 |
boris |
allpy: allpy_data --> allpy.data |
| Sat, 04 Dec 2010 00:04:48 +0300 |
boris |
allpy: allpy_pdb --> allpy.pdb |
| Fri, 03 Dec 2010 23:37:16 +0300 |
boris |
allpy: monomers improvements |
| Fri, 03 Dec 2010 23:24:43 +0300 |
boris |
allpy: monomers completed |
| Fri, 03 Dec 2010 22:57:37 +0300 |
boris |
allpy: add documentation to base.Sequence |
| Fri, 03 Dec 2010 22:54:48 +0300 |
boris |
allpy: correct unworking code |
| Fri, 03 Dec 2010 22:28:06 +0300 |
boris (netbook) |
allpy: function rename |
| Fri, 03 Dec 2010 22:24:00 +0300 |
boris (netbook) |
allpy: protein.py, dna.py, rna.py drafts |
| Fri, 03 Dec 2010 22:19:13 +0300 |
boris (netbook) |
allpy: add base.py1.1.0 |
| Fri, 03 Dec 2010 22:10:53 +0300 |
boris (netbook) |
allpy: fix old changes in main classess attributes |
| Tue, 30 Nov 2010 17:11:25 +0300 |
boris (netbook) |
rm source.py |
| Tue, 30 Nov 2010 17:11:03 +0300 |
boris (netbook) |
allpy: add protein and source classes |
| Tue, 30 Nov 2010 17:10:25 +0300 |
boris (netbook) |
allpy: start moving to new class interfaces |
| Sun, 28 Nov 2010 17:40:11 +0300 |
boris |
repeats: fix bug with same lines in output file |
| Sat, 27 Nov 2010 22:42:36 +0300 |
boris |
repeats: remove useless file |
| Sat, 27 Nov 2010 22:41:18 +0300 |
boris |
repeats: 1) Repeat --> Interval, RepeatGroup --> IntervalGroup |
| Sat, 27 Nov 2010 21:44:26 +0300 |
boris |
Backed out changeset 684ff5579345 |
| Sat, 27 Nov 2010 21:44:11 +0300 |
boris |
repeats: join fragments before joining |
| Sat, 27 Nov 2010 19:50:57 +0300 |
boris |
repeats: fix +-1 problem (interval ends) |
| Sat, 27 Nov 2010 19:21:17 +0300 |
boris |
repeats: rename group_start and group_end to group_real_start and group_real_end |
| Sat, 27 Nov 2010 18:47:13 +0300 |
boris |
repeats: universal input format parser |
| Sat, 27 Nov 2010 18:41:20 +0300 |
boris |
repeats: new format of input file in test |
| Fri, 26 Nov 2010 18:38:00 +0300 |
boris (netbook) |
repeats: tab-separated output |
| Fri, 26 Nov 2010 12:24:16 +0300 |
boris (netbook) |
repeats: fix, add test |
| Wed, 24 Nov 2010 14:57:24 +0300 |
boris (netbook) |
repeats: documentation; doctest corrected |
| Wed, 24 Nov 2010 00:51:56 +0300 |
boris |
repeats: output improvents |
| Wed, 24 Nov 2010 00:35:30 +0300 |
boris |
repeats: output improvements |
| Wed, 24 Nov 2010 00:11:15 +0300 |
boris |
repeats: improvements |
| Tue, 23 Nov 2010 23:58:54 +0300 |
boris |
merge |
| Sun, 21 Nov 2010 13:16:36 +0300 |
boris |
remove useless self-made intervl container libs |
| Tue, 23 Nov 2010 18:34:54 +0300 |
boris (netbook) |
repeats: fix end+1 problem on input. NB end+1 problem on output |
| Tue, 23 Nov 2010 18:07:08 +0300 |
boris (netbook) |
repeats: test: improvements |
| Tue, 23 Nov 2010 17:59:48 +0300 |
boris (netbook) |
repeats: fixes |
| Tue, 23 Nov 2010 17:53:02 +0300 |
boris (netbook) |
repeats: fixes |
| Tue, 23 Nov 2010 17:29:43 +0300 |
boris (netbook) |
repeats: add program for run and input example |
| Tue, 23 Nov 2010 17:15:02 +0300 |
boris (netbook) |
pereats: add test with "-" ori |
| Tue, 23 Nov 2010 17:11:56 +0300 |
boris (netbook) |
repeats: fix mismatch (there was no mistake) |
| Tue, 23 Nov 2010 17:10:23 +0300 |
boris (netbook) |
repeats: improve repeat.__repr__; find doctest mismatch |
| Tue, 23 Nov 2010 16:55:03 +0300 |
boris (netbook) |
repeats: doctest completed |
| Tue, 23 Nov 2010 16:34:19 +0300 |
boris (netbook) |
repeats: fix the mistake |
