1.1 --- a/allpy/config.py	Fri Mar 23 16:52:31 2012 +0400
     1.2 +++ b/allpy/config.py	Sun Mar 25 22:54:35 2012 +0400
     1.3 @@ -1,3 +1,5 @@
     1.4 +
     1.5 +debug = False
     1.6  
     1.7  delta = 2.0 # for geometrical core building
     1.8  minsize = 20 # min size of returning cores

     2.1 --- a/allpy/graph.py	Fri Mar 23 16:52:31 2012 +0400
     2.2 +++ b/allpy/graph.py	Sun Mar 25 22:54:35 2012 +0400
     2.3 @@ -1,6 +1,8 @@
     2.4  from datetime import datetime, timedelta
     2.5  from copy import copy
     2.6  
     2.7 +import config
     2.8 +
     2.9  class TimeoutError(Exception):
    2.10      pass
    2.11  
    2.12 @@ -84,7 +86,8 @@
    2.13          """
    2.14          if timeout == 0:
    2.15              raise TimeoutError()
    2.16 -        print 'Bron and Kerbosh algorithm started'
    2.17 +        if config.debug:
    2.18 +            print 'Bron and Kerbosh algorithm started'
    2.19          cliques = []
    2.20  
    2.21          class ExtendCall(object):
    2.22 @@ -180,7 +183,8 @@
    2.23  
    2.24          clique is frozenset
    2.25          """
    2.26 -        print 'Fast algorithm started'
    2.27 +        if config.debug:
    2.28 +            print 'Fast algorithm started'
    2.29          cliques = []
    2.30          while True:
    2.31              graph = self.copy()

     3.1 --- a/allpy/structure.py	Fri Mar 23 16:52:31 2012 +0400
     3.2 +++ b/allpy/structure.py	Sun Mar 25 22:54:35 2012 +0400
     3.3 @@ -61,7 +61,8 @@
     3.4      def __call__(self, code):
     3.5          code = code.lower()
     3.6          url = self.pdb_url % code
     3.7 -        print "Download %s" % url
     3.8 +        if config.debug:
     3.9 +            print "Download %s" % url
    3.10          return urllib2.urlopen(url)
    3.11  download_pdb = DownloadPdb()
    3.12