| age |
author |
description |
| Tue, 26 Oct 2010 21:53:23 +0400 |
boris |
idea implemented: pdb and sec_str data moved from monomer to sequence |
| Tue, 26 Oct 2010 00:40:36 +0400 |
boris (netbook) |
day commit -- a lot of changes |
| Mon, 25 Oct 2010 13:30:11 +0400 |
boris (netbook) |
documentation improvements |
| Mon, 25 Oct 2010 00:03:35 +0400 |
boris |
everwhere: mkstemp --> NamedTemporaryFile. unlink useless temp files |
| Sun, 24 Oct 2010 23:12:15 +0400 |
boris |
documentation improvements |
| Sun, 24 Oct 2010 20:31:07 +0400 |
boris |
fixes. GC: input msf added |
| Sun, 24 Oct 2010 19:05:31 +0400 |
boris |
project.from_fasta improvements |
| Sun, 24 Oct 2010 18:12:21 +0400 |
boris |
sequence.pdb_auto_add |
| Sun, 24 Oct 2010 17:29:59 +0400 |
boris |
allpy_pdb: new fasta id parsing function |
| Sun, 24 Oct 2010 17:06:15 +0400 |
boris |
block, project: gap charecter can be changed, when save to fasta |
| Sat, 23 Oct 2010 13:16:12 +0400 |
boris |
broken: lib::block::to_fasta -> save_fasta |
| Sat, 23 Oct 2010 12:57:07 +0400 |
boris |
broken: lib::project::column -- new returning value |
| Sat, 23 Oct 2010 12:07:21 +0400 |
boris |
fixes |
| Fri, 22 Oct 2010 17:07:51 +0400 |
boris (netbook) |
merge |
| Fri, 22 Oct 2010 17:07:21 +0400 |
boris (netbook) |
broken: lib:Sequence new argument order in constructor |
| Thu, 21 Oct 2010 15:22:36 +0400 |
Daniil Alexeyevsky |
lib: renamed monomer_type to either type or monomer_kind where appropriate |
| Thu, 21 Oct 2010 01:00:18 +0400 |
boris |
lib::project::column |
| Thu, 21 Oct 2010 00:39:57 +0400 |
boris |
lib::MonomerType operator== consider only one letter code |
| Wed, 20 Oct 2010 23:38:21 +0400 |
boris |
lib::save_fasta ugly bug fixed |
| Wed, 20 Oct 2010 23:33:29 +0400 |
boris |
lib::project::muscle_align |
| Wed, 20 Oct 2010 22:49:02 +0400 |
boris |
lib::project::save_fasta |
| Wed, 20 Oct 2010 22:24:59 +0400 |
boris |
lib::alignment::from_sequences |
| Wed, 20 Oct 2010 22:16:52 +0400 |
boris |
lib: test fix |
| Wed, 20 Oct 2010 15:17:55 +0400 |
boris (netbook) |
lib: amino_acid_type |
| Wed, 20 Oct 2010 10:05:43 +0400 |
boris |
from_fasta with new monomer class and monomer_type |
| Tue, 19 Oct 2010 14:42:04 +0400 |
boris (netbook) |
add test.py |
| Wed, 22 Sep 2010 19:04:00 +0400 |
Boris Burkov |
Merge |
| Wed, 22 Sep 2010 18:31:56 +0400 |
Boris Burkov |
In project.py method "get_from_fasta" renamed "from_fasta" |
| Sat, 18 Sep 2010 11:31:56 +0400 |
boris |
repare get_from_fasta |
| Wed, 09 Jun 2010 15:02:37 +0400 |
grishin |
project.py: project.thickness => number of sequences in alignment |
| Wed, 09 Jun 2010 14:43:04 +0400 |
grishin |
project.py: EXTREMELY ugly method to calculate the identity percentage of alignment columns for colouring has been added. It will be improved later. |
| Wed, 09 Jun 2010 14:30:17 +0400 |
grishin |
'__len__' method has been added, that return the alignment length. |
| Mon, 31 May 2010 16:16:19 +0400 |
Boris Burkov |
Several unnecessary imports removed |
| Fri, 21 May 2010 20:30:40 +0400 |
Boris Burkov |
Initial commit with the lib modules |
