allpy: b556c96c6719 pair

allpy

blocks3d/www Makefile: never check certificates of github, they are too confusing for wget

author	Daniil Alexeyevsky <dendik@kodomo.fbb.msu.ru>
date	Mon, 26 May 2014 17:20:29 +0400
parents	6c6ae5013ab6
children

line source

1 #!/usr/bin/python

3 import os

4 import json

5 import sys

7 from protein_pdb import Alignment, Block, Sequence

8 from html import html_template

10 fasta_file = sys.argv[1]

11 blocks_file = sys.argv[2]

13 alignment = Alignment().append_file(open(fasta_file))

14 blocks = alignment.blocks_from_file(open(blocks_file))

15 alignment.blocks_to_html(sys.stdout, blocks, open(html_template).read())