view debian/changelog @ 642:a1307c0bb030
Added necessary hooks for monomer pickling [closes #35]
Current implementation is lazy and does not store all monomer classes
explicitly in some module. They are still generated on the fly.
Some monomer classes have the same name as per PDB database. In order to avoid
name clashes, we add underscores to classes, if same name class already exists.
WARNING.
This may and WILL cause trouble, if such clashes occur between different types
of monomers, in which case different names will be generated for the same class
depending on the order of loading modules.
The only example of such clash in the current database is dna monomer "0AV" and
rna "A2M", which both have name "2'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPHATE)"
| author |
Daniil Alexeyevsky <dendik@kodomo.fbb.msu.ru> |
| date |
Fri, 03 Jun 2011 16:49:44 +0400 |
| parents |
4605ead733d8 |
| children |
da46b25fd67d |
line source
1 allpy (1
.3
.0
-2
) unstable; urgency=low
3 * renamed geometrical-core to geometrical-core2 by request of Boris,
4 since the new version may yet be inferior to the old one in some aspects
6 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Fri, 15
Apr 2011 22
:31
:11
+0400
8 allpy (1
.3
.0
-1
) unstable; urgency=low
10 * geometrical-core depends on particular version of python-allpy (>= 1
.0
.0
)
12 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Fri, 15
Apr 2011 22
:07
:18
+0400
14 allpy (1
.3
.0
) unstable; urgency=low
17 Version tracking an compact history starts with this version. The question
18 of related programs and utils versioning is yet undecided.
19 * New geometrical-core requires two packages with local install.
20 Added sed script to add /usr/share/geometrical-core to sys.path.
21 The required packages go there.
23 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Fri, 15
Apr 2011 21
:21
:40
+0400
25 allpy (0
.0
-6
) unstable; urgency=medium
27 * blocks3d-wt: reorganized apache configs for more stable operation
29 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Tue, 22
Feb 2011 17
:16
:50
+0300
31 allpy (0
.0
-5
) unstable; urgency=medium
33 * blocks3d-wt debianization: fixed urls for various resources (js &
36 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Sun, 20
Feb 2011 22
:18
:47
+0300
38 allpy (0
.0
-4
) unstable; urgency=medium
40 * Fixed setup.py to install allpy/data too (surprisingly, it did not
42 * Blocks3D_config: guess location of html.htm properly
43 * Removed mktemp_string in favour of one-time mkdtemp invocation
44 * Debianized blocks3d, blocks3d-wt; fixed debian dependencies for
45 python-allpy where necessary
47 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Sun, 20
Feb 2011 20
:47
:04
+0300
49 allpy (0
.0
-3
) unstable; urgency=medium
51 * Fixed syntax errors in source to soothe postinst scripts.
53 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Mon, 22
Nov 2010 13
:43
:59
+0300
55 allpy (0
.0
-2
) unstable; urgency=medium
57 * Initial debianization.
59 -- Danya Alexeyevsky <dendik@kodomo.fbb.msu.ru> Mon, 15
Nov 2010 17
:40
:37
+0300
61 vim: set ft=debchangelog et ai:
