view NEWS @ 900:7ebba94eece2
MarkupIOMixin: added attribute quotes to allow quotation around markup serialized string; fixed implementation of SequenceCaseMarkup based on that; [closes #125]
| author |
Daniil Alexeyevsky <dendik@kodomo.fbb.msu.ru> |
| date |
Tue, 11 Oct 2011 17:21:44 +0400 |
| parents |
da46b25fd67d |
| children |
b8f1c216bca8 |
line source
3 This is a code cleanup release.
4 Nothing should change in the interface or behaviour at all.
8 * new: Alignments, Sequences and Blocks now can have Markups, see the wiki
9 * new: File format 'markup' for storing alignment with arbitrary markups
10 * new: processor allpy.processors.Needle()
11 * new: method allpy.base.Alignment.rows_as_strings()
12 * new: method allpy.base.Alignment.row_as_list(sequence)
13 * new: method allpy.base.Alignment.row_as_string(sequence)
14 * new: columns_as_lists() returns list of lists, each has 'column' attribute
15 * new: javascript viewer colors columns by conservedness
19 * new: started NEWS file
20 * new: started tracking version numbers
