view NEWS @ 1031:2421101d4aae
blocks_to_pymol(): add pymol command by_block
| author |
Boris Nagaev <bnagaev@gmail.com> |
| date |
Fri, 16 Mar 2012 16:06:18 +0400 |
| parents |
230aaa440351 |
| children |
83167a09a19d 452ac0c16295 |
line source
1 * new: add an argument not to save downloaded pdb (CachedDownloadPdb)
2 * new: Geometrical core improvement: ignore cores, owned by one SS element
3 * new: allow to load custom pdbs (allpy.structure)
4 * new: add pymol superimposition feature draft (allpy.structure)
6 * new: add features of blocks3d.py to pair_cores.py
7 * new: add ``
parts'' argument to blocks3d() (allpy.structure)
8 * new: add method blocks_from_homology() (allpy.structure)
9 * new: add MonomerHomology-based high blocks building algo to pair-cores
10 * new: print default values of command line args in help message (pair_cores)
11 * new: add web interface for pair-cores
15 This is a code cleanup release.
16 Nothing should change in the interface or behaviour at all.
20 * new: Alignments, Sequences and Blocks now can have Markups, see the wiki
21 * new: File format 'markup' for storing alignment with arbitrary markups
22 * new: processor allpy.processors.Needle()
23 * new: method allpy.base.Alignment.rows_as_strings()
24 * new: method allpy.base.Alignment.row_as_list(sequence)
25 * new: method allpy.base.Alignment.row_as_string(sequence)
26 * new: columns_as_lists() returns list of lists, each has 'column' attribute
27 * new: javascript viewer colors columns by conservedness
31 * new: started NEWS file
32 * new: started tracking version numbers
