allpy: 1b5e12fe96a7 allpy/rna.py

allpy

pair-cores/web: use stable branch of wt-classes branch 1.4 is 1.4.0 (previously used) + bugfixes

author	Boris Nagaev <bnagaev@gmail.com>
date	Thu, 10 Jan 2013 19:53:07 +0400
parents	6e87dcc73d8b
children

line source

1 import base

2 import data.codes

4 import rna

6 class Monomer(base.Monomer):

7 """RNA monomers: nucleotides."""

8 type = 'rna'

9 types = rna

10 by_code1 = {}

11 by_code3 = {}

12 by_name = {}

13 Monomer._initialize(data.codes.rna)

15 class Sequence(base.Sequence):

16 types = rna

18 class Column(base.Column):

19 types = rna

21 class Alignment(base.Alignment):

22 types = rna

24 class Block(Alignment, base.Block):

25 pass

27 # vim: set ts=4 sts=4 sw=4 et: