allpy
view allpy/fasta.py @ 350:0411fa851bba
Fixed references to base interface according to previous changes (closes #12)
author | Daniil Alexeyevsky <me.dendik@gmail.com> |
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date | Fri, 21 Jan 2011 15:00:23 +0300 |
parents | 6ad74e2ba3d2 |
children | 695c8a42bf1e |
line source
4 """Parse fasta file, remove spaces and newlines from sequence bodies.
6 Return a list of tuples (name, description, sequence_body).
7 """
20 """ Saves given string to out_file in fasta_format
22 Splits long lines to substrings of length=long_line
23 To prevent this, set long_line=None
24 """
35 """ Returns maximum sequence line length in fasta file """
43 # vim: set ts=4 sts=4 sw=4 et: